Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauG2|5957
Gene name
LocationContig_58:34733..35401
Strand+
Gene length (bp)668
Transcript length (bp)558
Coding sequence length (bp)558
Protein length (aa) 186

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF03067 LPMO_10 Lytic polysaccharide mono-oxygenase, cellulose-degrading 6.7E-05 19 181

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 19 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauG2|5957
MKTGALITIASCAAAVSAHGMIREPPARATGPAMVKACGRQAVASVNADDTIPLEDVVAPLPSCKLNLCRGATWQ
DNKSLLQLLSAGDIVNFQVDLAIPHEGPCNVSIVDTKTNSVIGQPLISFDSYADEKLARLPANNTNFDVVMPQLR
QNQCKQPGRCVLQWFWVGTAARQTYESCVDFVMTA*
Coding >OphauG2|5957
ATGAAGACGGGGGCTCTGATTACCATTGCAAGCTGCGCTGCTGCCGTCTCTGCGCATGGCATGATCCGCGAGCCT
CCAGCGCGCGCCACTGGCCCAGCCATGGTAAAGGCTTGCGGCAGGCAGGCCGTGGCGTCGGTGAATGCAGACGAC
ACCATTCCGCTCGAGGACGTTGTCGCTCCCTTGCCGTCATGCAAACTCAATCTCTGCCGTGGTGCGACCTGGCAA
GACAACAAGAGCCTCCTGCAGCTCTTGTCGGCTGGCGACATTGTCAACTTCCAGGTCGACTTGGCCATCCCGCAC
GAGGGCCCGTGCAATGTGTCCATTGTCGACACCAAGACAAACTCGGTCATTGGCCAGCCTCTGATTAGCTTTGAC
TCTTATGCCGATGAGAAACTGGCCAGGCTCCCAGCCAACAACACCAACTTTGACGTCGTCATGCCCCAGCTCCGC
CAGAACCAATGCAAACAGCCTGGCCGCTGTGTCTTGCAGTGGTTCTGGGTCGGCACTGCCGCCAGGCAGACATAT
GAGAGCTGCGTCGACTTTGTCATGACAGCATGA
Transcript >OphauG2|5957
ATGAAGACGGGGGCTCTGATTACCATTGCAAGCTGCGCTGCTGCCGTCTCTGCGCATGGCATGATCCGCGAGCCT
CCAGCGCGCGCCACTGGCCCAGCCATGGTAAAGGCTTGCGGCAGGCAGGCCGTGGCGTCGGTGAATGCAGACGAC
ACCATTCCGCTCGAGGACGTTGTCGCTCCCTTGCCGTCATGCAAACTCAATCTCTGCCGTGGTGCGACCTGGCAA
GACAACAAGAGCCTCCTGCAGCTCTTGTCGGCTGGCGACATTGTCAACTTCCAGGTCGACTTGGCCATCCCGCAC
GAGGGCCCGTGCAATGTGTCCATTGTCGACACCAAGACAAACTCGGTCATTGGCCAGCCTCTGATTAGCTTTGAC
TCTTATGCCGATGAGAAACTGGCCAGGCTCCCAGCCAACAACACCAACTTTGACGTCGTCATGCCCCAGCTCCGC
CAGAACCAATGCAAACAGCCTGGCCGCTGTGTCTTGCAGTGGTTCTGGGTCGGCACTGCCGCCAGGCAGACATAT
GAGAGCTGCGTCGACTTTGTCATGACAGCATGA
Gene >OphauG2|5957
ATGAAGACGGGGGCTCTGATTACCATTGCAAGCTGCGCTGCTGCCGTCTCTGCGCATGGCATGATCCGCGAGCCT
CCAGCGCGCGCCACTGGCCCAGCCATGGTAAAGGCTTGCGGCAGGCAGGCCGTGGCGTCGGTGAATGCAGACGAC
ACCATTCCGCTCGAGGACGTTGTCGCTCCCTTGCCGTCATGTAAGGCTTACATAGCAACCAGGCCATGCATGGCC
TCTGCTCCTCTGTGCCCTGCTCCTCTGTGCCCTGCTCCTCTGTGCCGGTTGCTGACAAGACACGCCATGATGCAG
GCAAACTCAATCTCTGCCGTGGTGCGACCTGGCAAGACAACAAGAGCCTCCTGCAGCTCTTGTCGGCTGGCGACA
TTGTCAACTTCCAGGTCGACTTGGCCATCCCGCACGAGGGCCCGTGCAATGTGTCCATTGTCGACACCAAGACAA
ACTCGGTCATTGGCCAGCCTCTGATTAGCTTTGACTCTTATGCCGATGAGAAACTGGCCAGGCTCCCAGCCAACA
ACACCAACTTTGACGTCGTCATGCCCCAGCTCCGCCAGAACCAATGCAAACAGCCTGGCCGCTGTGTCTTGCAGT
GGTTCTGGGTCGGCACTGCCGCCAGGCAGACATATGAGAGCTGCGTCGACTTTGTCATGACAGCATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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