© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauG2|5921 |
| Gene name | |
| Location | Contig_575:11472..11940 |
| Strand | - |
| Gene length (bp) | 468 |
| Transcript length (bp) | 405 |
| Coding sequence length (bp) | 405 |
| Protein length (aa) | 135 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00043 | GST_C | Glutathione S-transferase, C-terminal domain | 2.3E-12 | 13 | 95 |
| PF13410 | GST_C_2 | Glutathione S-transferase, C-terminal domain | 3.4E-10 | 30 | 89 |
| PF14497 | GST_C_3 | Glutathione S-transferase, C-terminal domain | 3.2E-06 | 34 | 95 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q00717|STCT_EMENI | Putative sterigmatocystin biosynthesis protein stcT OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=stcT PE=4 SV=1 | 2 | 116 | 9.0E-19 |
| sp|O04487|EF1G1_ARATH | Probable elongation factor 1-gamma 1 OS=Arabidopsis thaliana GN=At1g09640 PE=2 SV=1 | 1 | 97 | 7.0E-09 |
| sp|Q90YC0|EF1G_CARAU | Elongation factor 1-gamma OS=Carassius auratus GN=eef1g PE=2 SV=1 | 2 | 109 | 8.0E-09 |
| sp|Q6PE25|EF1G_DANRE | Elongation factor 1-gamma OS=Danio rerio GN=eef1g PE=2 SV=1 | 2 | 109 | 1.0E-08 |
| sp|P29547|EF1G1_YEAST | Elongation factor 1-gamma 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CAM1 PE=1 SV=2 | 13 | 95 | 1.0E-08 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q00717|STCT_EMENI | Putative sterigmatocystin biosynthesis protein stcT OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=stcT PE=4 SV=1 | 2 | 116 | 9.0E-19 |
| sp|O04487|EF1G1_ARATH | Probable elongation factor 1-gamma 1 OS=Arabidopsis thaliana GN=At1g09640 PE=2 SV=1 | 1 | 97 | 7.0E-09 |
| sp|Q90YC0|EF1G_CARAU | Elongation factor 1-gamma OS=Carassius auratus GN=eef1g PE=2 SV=1 | 2 | 109 | 8.0E-09 |
| sp|Q6PE25|EF1G_DANRE | Elongation factor 1-gamma OS=Danio rerio GN=eef1g PE=2 SV=1 | 2 | 109 | 1.0E-08 |
| sp|P29547|EF1G1_YEAST | Elongation factor 1-gamma 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CAM1 PE=1 SV=2 | 13 | 95 | 1.0E-08 |
| sp|P49696|SYVC_TAKRU | Valine--tRNA ligase OS=Takifugu rubripes GN=vars PE=3 SV=1 | 13 | 109 | 2.0E-08 |
| sp|Q9FVT2|EF1G2_ARATH | Probable elongation factor 1-gamma 2 OS=Arabidopsis thaliana GN=At1g57720 PE=2 SV=1 | 1 | 97 | 2.0E-07 |
| sp|Q29387|EF1G_PIG | Elongation factor 1-gamma (Fragment) OS=Sus scrofa GN=EEF1G PE=2 SV=2 | 2 | 109 | 2.0E-07 |
| sp|Q9ZRI7|EF1G1_ORYSJ | Elongation factor 1-gamma 1 OS=Oryza sativa subsp. japonica GN=Os02g0220600 PE=2 SV=1 | 2 | 97 | 3.0E-07 |
| sp|Q9FUM1|EF1G_PRUAV | Elongation factor 1-gamma OS=Prunus avium PE=2 SV=1 | 1 | 97 | 3.0E-07 |
| sp|P26642|EF1GA_XENLA | Elongation factor 1-gamma-A OS=Xenopus laevis GN=eef1g-a PE=1 SV=1 | 3 | 109 | 3.0E-07 |
| sp|Q91375|EF1GB_XENLA | Elongation factor 1-gamma-B OS=Xenopus laevis GN=eef1g-b PE=2 SV=1 | 3 | 109 | 5.0E-07 |
| sp|Q3SZV3|EF1G_BOVIN | Elongation factor 1-gamma OS=Bos taurus GN=EEF1G PE=2 SV=1 | 2 | 109 | 6.0E-07 |
| sp|Q4R7H5|EF1G_MACFA | Elongation factor 1-gamma OS=Macaca fascicularis GN=EEF1G PE=2 SV=1 | 2 | 109 | 7.0E-07 |
| sp|P54412|EF1G_CAEEL | Probable elongation factor 1-gamma OS=Caenorhabditis elegans GN=eef-1G PE=3 SV=1 | 9 | 95 | 7.0E-07 |
| sp|P29694|EF1G_RABIT | Elongation factor 1-gamma OS=Oryctolagus cuniculus GN=EEF1G PE=2 SV=3 | 2 | 109 | 7.0E-07 |
| sp|A2Q127|EF1G_HORSE | Elongation factor 1-gamma OS=Equus caballus GN=EEF1G PE=2 SV=1 | 2 | 109 | 8.0E-07 |
| sp|Q6YW46|EF1G2_ORYSJ | Elongation factor 1-gamma 2 OS=Oryza sativa subsp. japonica GN=Os02g0220500 PE=2 SV=2 | 2 | 97 | 9.0E-07 |
| sp|Q5Z627|EF1G3_ORYSJ | Elongation factor 1-gamma 3 OS=Oryza sativa subsp. japonica GN=Os06g0571400 PE=2 SV=1 | 2 | 97 | 1.0E-06 |
| sp|B5BP46|YP52_SCHPO | Putative glutathione S-transferase C1183.02 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC460.02c PE=3 SV=1 | 10 | 94 | 2.0E-06 |
| sp|Q68FR6|EF1G_RAT | Elongation factor 1-gamma OS=Rattus norvegicus GN=Eef1g PE=2 SV=3 | 2 | 109 | 3.0E-06 |
| sp|Q9D8N0|EF1G_MOUSE | Elongation factor 1-gamma OS=Mus musculus GN=Eef1g PE=1 SV=3 | 2 | 109 | 3.0E-06 |
| sp|P26641|EF1G_HUMAN | Elongation factor 1-gamma OS=Homo sapiens GN=EEF1G PE=1 SV=3 | 2 | 109 | 4.0E-06 |
| sp|P12261|EF1G_ARTSA | Elongation factor 1-gamma OS=Artemia salina PE=1 SV=3 | 10 | 109 | 6.0E-06 |
| sp|P36008|EF1G2_YEAST | Elongation factor 1-gamma 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TEF4 PE=1 SV=1 | 38 | 118 | 1.0E-05 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 17 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauG2|5921 MEVAVPLTGWFQPLVGWREYDRALVSKSSQATLKAMDVVEAHLSDKSFLVGDTLSAADYFCAGLVYRGFQFFFDR NWRHHHPHVSQWYETVTNQPDYLATTHKLEVLEQCLVNEPPSETTIRNNRLRLTKTSMT* |
| Coding | >OphauG2|5921 ATGGAAGTTGCTGTCCCGTTAACCGGCTGGTTCCAGCCTCTGGTGGGATGGAGAGAATACGACAGAGCACTTGTA TCCAAGAGCTCCCAAGCAACCCTCAAGGCCATGGATGTTGTCGAGGCGCATTTAAGCGACAAATCCTTTCTAGTC GGCGACACCCTTAGTGCTGCCGATTATTTCTGCGCCGGCCTTGTCTACCGCGGCTTCCAATTCTTTTTTGATAGG AACTGGCGCCACCATCATCCACACGTTAGCCAGTGGTACGAGACTGTCACAAATCAGCCAGATTACCTCGCCACT ACGCACAAGCTCGAAGTACTCGAGCAATGCCTTGTTAACGAACCGCCATCTGAGACGACGATACGAAATAATCGC CTGCGCTTGACCAAAACGTCCATGACGTAA |
| Transcript | >OphauG2|5921 ATGGAAGTTGCTGTCCCGTTAACCGGCTGGTTCCAGCCTCTGGTGGGATGGAGAGAATACGACAGAGCACTTGTA TCCAAGAGCTCCCAAGCAACCCTCAAGGCCATGGATGTTGTCGAGGCGCATTTAAGCGACAAATCCTTTCTAGTC GGCGACACCCTTAGTGCTGCCGATTATTTCTGCGCCGGCCTTGTCTACCGCGGCTTCCAATTCTTTTTTGATAGG AACTGGCGCCACCATCATCCACACGTTAGCCAGTGGTACGAGACTGTCACAAATCAGCCAGATTACCTCGCCACT ACGCACAAGCTCGAAGTACTCGAGCAATGCCTTGTTAACGAACCGCCATCTGAGACGACGATACGAAATAATCGC CTGCGCTTGACCAAAACGTCCATGACGTAA |
| Gene | >OphauG2|5921 ATGGAAGTTGCTGTCCCGTTAACCGGCTGGTTCCAGCCTCTGGTGGGATGGAGAGAATACGACAGAGCACTTGTA TCCAAGAGCTCCCAAGCAACCCTCAAGGCCATGGATGTTGTCGAGGCGCATTTAAGCGACAAATCCTTTCTAGTC GGCGACACCCTTAGTGCTGCCGATTATTTCTGCGCCGGCCTTGTCTACCGCGGCTTCCAATTCTTTTTTGATAGG AACTGGCGCCACCATCATCCACACGTTAGCCAGTGGTACGAGACTGTCACAAATCAGCCAGATTACCTCGCCACT ACGCACAAGCTCGAAGTACTCGAGCAATGCCTTGTTAACGAACCGCCATCTGAGACGACGATACGAAATAATCGC CTGCGCTTGACCAAAACGTCCATGGTAAGGCTCTTTTATACTCATATTGCTAGGGAGAAGAGAAAAAGACATTGG ACATGACGCGAGACGTAA |