© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | OphauG2|592 |
| Gene name | |
| Location | Contig_1141:177..1553 |
| Strand | + |
| Gene length (bp) | 1376 |
| Transcript length (bp) | 1116 |
| Coding sequence length (bp) | 1116 |
| Protein length (aa) | 372 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF08449 | UAA | UAA transporter family | 4.7E-97 | 34 | 349 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O74750|YEA4_SCHPO | UDP-N-acetylglucosamine transporter yea4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=yea4 PE=3 SV=1 | 32 | 355 | 5.0E-75 |
| sp|P40004|YEA4_YEAST | UDP-N-acetylglucosamine transporter YEA4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YEA4 PE=1 SV=1 | 39 | 359 | 4.0E-64 |
| sp|Q00974|YEA4_KLULA | UDP-N-acetylglucosamine transporter YEA4 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=YEA4 PE=3 SV=1 | 34 | 352 | 4.0E-59 |
| sp|Q9W429|S35B4_DROME | UDP-xylose and UDP-N-acetylglucosamine transporter OS=Drosophila melanogaster GN=Efr PE=2 SV=1 | 37 | 367 | 2.0E-55 |
| sp|Q8CIA5|S35B4_MOUSE | UDP-xylose and UDP-N-acetylglucosamine transporter OS=Mus musculus GN=Slc35b4 PE=2 SV=2 | 39 | 369 | 7.0E-54 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O74750|YEA4_SCHPO | UDP-N-acetylglucosamine transporter yea4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=yea4 PE=3 SV=1 | 32 | 355 | 5.0E-75 |
| sp|P40004|YEA4_YEAST | UDP-N-acetylglucosamine transporter YEA4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YEA4 PE=1 SV=1 | 39 | 359 | 4.0E-64 |
| sp|Q00974|YEA4_KLULA | UDP-N-acetylglucosamine transporter YEA4 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=YEA4 PE=3 SV=1 | 34 | 352 | 4.0E-59 |
| sp|Q9W429|S35B4_DROME | UDP-xylose and UDP-N-acetylglucosamine transporter OS=Drosophila melanogaster GN=Efr PE=2 SV=1 | 37 | 367 | 2.0E-55 |
| sp|Q8CIA5|S35B4_MOUSE | UDP-xylose and UDP-N-acetylglucosamine transporter OS=Mus musculus GN=Slc35b4 PE=2 SV=2 | 39 | 369 | 7.0E-54 |
| sp|Q95KB4|S35B4_MACFA | UDP-xylose and UDP-N-acetylglucosamine transporter OS=Macaca fascicularis GN=SLC35B4 PE=2 SV=1 | 34 | 369 | 8.0E-54 |
| sp|Q5R8M3|S35B4_PONAB | UDP-xylose and UDP-N-acetylglucosamine transporter OS=Pongo abelii GN=SLC35B4 PE=2 SV=1 | 34 | 369 | 3.0E-53 |
| sp|Q969S0|S35B4_HUMAN | UDP-xylose and UDP-N-acetylglucosamine transporter OS=Homo sapiens GN=SLC35B4 PE=1 SV=1 | 34 | 369 | 8.0E-53 |
| sp|Q7ZW46|S35B4_DANRE | UDP-xylose and UDP-N-acetylglucosamine transporter OS=Danio rerio GN=slc35b4 PE=2 SV=1 | 39 | 349 | 2.0E-52 |
| sp|Q869W7|S35B4_DICDI | UDP-N-acetylglucosamine transporter slc35b4 OS=Dictyostelium discoideum GN=slc35b4 PE=3 SV=2 | 22 | 353 | 3.0E-46 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| GO:0006810 | transport | No |
| GO:0008150 | biological_process | No |
| GO:0009987 | cellular process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 47 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 29 | 51 | 22 |
| 2 | 61 | 80 | 19 |
| 3 | 101 | 123 | 22 |
| 4 | 153 | 170 | 17 |
| 5 | 191 | 210 | 19 |
| 6 | 225 | 247 | 22 |
| 7 | 289 | 311 | 22 |
| 8 | 321 | 343 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauG2|592 MPQARARYKDASTGSANITKHIVADAAPSLLLVAVMLCLIFGGCCSNVYALEAIINFDPASGTLLTFVQFLFIAI TSYAAQFDYTRPPFFIAPSKVPLKRWLVNITLFFSINVLNNHAFSYDISVPVHIILRSGGSITTMTAGYLYGKKY SQLQALAVVLLSCGVVLAAWSDAQAKTSLPATNSTRPAFNMGLVVLFVAQLLSAAMGLYTEATYRIYGPHWRENL FYSHLLSLPLFLPLAPAMIRTLDRMMQSEQIHVALPLLSPGTAKSNLHIPTQALYLAINVLTQYACIRGVNLLAA VSTALTVTIVLNIRKLASLLLSIWLFGNSLATGTIIGAVIVFGSGALYSIGSRPKQTHECSPSGDEHKKRQ* |
| Coding | >OphauG2|592 ATGCCACAAGCCCGAGCTCGATATAAAGATGCGAGCACCGGCTCAGCAAACATTACTAAGCACATTGTCGCCGAT GCTGCCCCTTCACTTCTTCTCGTGGCGGTGATGCTTTGCCTTATATTTGGCGGGTGTTGTTCAAATGTCTATGCT CTCGAAGCTATTATAAACTTCGACCCTGCCAGCGGAACGCTCTTGACTTTTGTTCAATTCCTCTTCATAGCCATC ACGAGCTATGCTGCGCAGTTTGATTACACTCGTCCACCATTTTTCATCGCTCCATCTAAAGTGCCACTGAAACGG TGGCTCGTTAACATCACACTCTTCTTCAGTATTAACGTGCTCAACAACCATGCCTTTAGTTATGATATCTCTGTG CCGGTGCACATCATACTGCGCTCTGGTGGCAGCATCACCACCATGACTGCGGGCTACCTGTACGGTAAAAAATAC TCGCAACTCCAAGCGCTGGCCGTTGTTCTTTTGAGCTGTGGCGTTGTACTAGCTGCCTGGTCTGATGCGCAGGCA AAGACAAGCTTGCCGGCTACCAACTCCACCAGACCGGCTTTTAACATGGGACTTGTCGTCTTATTTGTCGCTCAG CTACTATCAGCTGCAATGGGTCTCTATACCGAGGCTACATATCGCATATATGGCCCTCATTGGCGCGAAAATCTC TTCTACTCGCACCTCTTGTCTTTGCCTTTGTTTCTACCCTTGGCGCCAGCAATGATTCGAACGTTAGATCGCATG ATGCAGAGCGAGCAAATACATGTCGCCCTACCGCTGCTCTCTCCAGGCACTGCAAAAAGTAACCTGCATATACCA ACTCAGGCATTATATCTAGCTATCAACGTCTTGACCCAATATGCTTGCATTCGCGGCGTCAATCTACTAGCCGCC GTCTCAACCGCGCTTACAGTTACGATTGTTCTTAATATTCGCAAACTTGCTAGTCTGTTACTGAGCATCTGGCTT TTTGGAAATTCGTTGGCTACTGGGACTATCATTGGTGCCGTCATCGTATTCGGCTCAGGCGCTCTTTACTCGATT GGCTCGCGGCCGAAGCAAACTCATGAGTGCAGTCCAAGCGGCGATGAGCATAAAAAAAGACAATAA |
| Transcript | >OphauG2|592 ATGCCACAAGCCCGAGCTCGATATAAAGATGCGAGCACCGGCTCAGCAAACATTACTAAGCACATTGTCGCCGAT GCTGCCCCTTCACTTCTTCTCGTGGCGGTGATGCTTTGCCTTATATTTGGCGGGTGTTGTTCAAATGTCTATGCT CTCGAAGCTATTATAAACTTCGACCCTGCCAGCGGAACGCTCTTGACTTTTGTTCAATTCCTCTTCATAGCCATC ACGAGCTATGCTGCGCAGTTTGATTACACTCGTCCACCATTTTTCATCGCTCCATCTAAAGTGCCACTGAAACGG TGGCTCGTTAACATCACACTCTTCTTCAGTATTAACGTGCTCAACAACCATGCCTTTAGTTATGATATCTCTGTG CCGGTGCACATCATACTGCGCTCTGGTGGCAGCATCACCACCATGACTGCGGGCTACCTGTACGGTAAAAAATAC TCGCAACTCCAAGCGCTGGCCGTTGTTCTTTTGAGCTGTGGCGTTGTACTAGCTGCCTGGTCTGATGCGCAGGCA AAGACAAGCTTGCCGGCTACCAACTCCACCAGACCGGCTTTTAACATGGGACTTGTCGTCTTATTTGTCGCTCAG CTACTATCAGCTGCAATGGGTCTCTATACCGAGGCTACATATCGCATATATGGCCCTCATTGGCGCGAAAATCTC TTCTACTCGCACCTCTTGTCTTTGCCTTTGTTTCTACCCTTGGCGCCAGCAATGATTCGAACGTTAGATCGCATG ATGCAGAGCGAGCAAATACATGTCGCCCTACCGCTGCTCTCTCCAGGCACTGCAAAAAGTAACCTGCATATACCA ACTCAGGCATTATATCTAGCTATCAACGTCTTGACCCAATATGCTTGCATTCGCGGCGTCAATCTACTAGCCGCC GTCTCAACCGCGCTTACAGTTACGATTGTTCTTAATATTCGCAAACTTGCTAGTCTGTTACTGAGCATCTGGCTT TTTGGAAATTCGTTGGCTACTGGGACTATCATTGGTGCCGTCATCGTATTCGGCTCAGGCGCTCTTTACTCGATT GGCTCGCGGCCGAAGCAAACTCATGAGTGCAGTCCAAGCGGCGATGAGCATAAAAAAAGACAATAA |
| Gene | >OphauG2|592 ATGCCACAAGCCCGAGCTCGATATAAAGATGCGAGCACCGGCTCAGCAAACATTACTAAGCACATTGTCGCCGAT GCTGCCCCTTCACTTCTTCTCGTGGCGGTGATGCTTTGCCTTATATTTGGCGGGTGTTGTTCAAATGTGCGCATC CCTCAAAGAAACTAAGATGACATTGAAACTAATACGTTCACTCACGGTAGGTCTATGCTCTCGAAGCTATTATAA AGTAGGTAGGCTCCGCCTACGAGCCGTCGTATTCGGCCGGTGGTTAACTAGCTACTCTTCTCTTCTCCCTTCGCT TCAGCTTCGACCCTGCCAGCGGTGTGTGCAAACTCCAGGACACTCGCATACTCGGCACTATCGCTAAATTGGCTC TTGTTAGGAACGCTCTTGACTTTTGTTCAATTCCTCTTCATAGCCATCACGAGCTATGCTGCGCAGTTTGATTAC ACTCGTCCACCATTTTTCATCGCTCCATCTAAAGTGCCACTGAAACGGTGGCTCGTTAACATCACACTCTTCTTC AGTATTAACGTGCTCAACAACCATGCCTTTAGTTATGATATCTCTGTGCCGGTGCACATCATACTGCGCTCTGGT GGCAGCATCACCACCATGACTGCGGGCTACCTGTACGGTAAAAAATACTCGCAACTCCAAGCGCTGGCCGTTGTT CTTTTGAGCTGTGGCGTTGTACTAGCTGCCTGGTCTGATGCGCAGGCAAAGGTAGGTAAATCAAAGCTCAGAATA TCTCCCATGTTGAATCCAAATTAGCTCATTACCGTCAGACAAGCTTGCCGGCTACCAACTCCACCAGACCGGCTT TTAACATGGGACTTGTCGTCTTATTTGTCGCTCAGCTACTATCAGCTGCAATGGGTCTCTATACCGAGGCTACAT ATCGCATATATGGCCCTCATTGGCGCGAAAATCTCTTCTACTCGCACCTCTTGTCTTTGCCTTTGTTTCTACCCT TGGCGCCAGCAATGATTCGAACGTTAGATCGCATGATGCAGAGCGAGCAAATACATGTCGCCCTACCGCTGCTCT CTCCAGGCACTGCAAAAAGTAACCTGCATATACCAACTCAGGCATTATATCTAGCTATCAACGTCTTGACCCAAT ATGCTTGCATTCGCGGCGTCAATCTACTAGCCGCCGTCTCAACCGCGCTTACAGTTACGATTGTTCTTAATATTC GCAAACTTGCTAGTCTGTTACTGAGCATCTGGCTTTTTGGAAATTCGTTGGCTACTGGGACTATCATTGGTGCCG TCATCGTATTCGGCTCAGGCGCTCTTTACTCGATTGGCTCGCGGCCGAAGCAAACTCATGAGTGCAGTCCAAGCG GCGATGAGCATAAAAAAAGACAATAA |