Protein ID | OphauG2|5862 |
Gene name | |
Location | Contig_566:7928..10148 |
Strand | + |
Gene length (bp) | 2220 |
Transcript length (bp) | 2220 |
Coding sequence length (bp) | 2220 |
Protein length (aa) | 740 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF06011 | TRP | Transient receptor potential (TRP) ion channel | 7.6E-164 | 169 | 616 |
PF14558 | TRP_N | ML-like domain | 2.7E-43 | 28 | 164 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|P39719|FLC2_YEAST | Flavin carrier protein 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FLC2 PE=1 SV=2 | 23 | 670 | 1.0E-143 |
sp|Q08967|FLC1_YEAST | Flavin carrier protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FLC1 PE=1 SV=1 | 9 | 674 | 2.0E-143 |
sp|P53121|FLC3_YEAST | Putative flavin carrier protein 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FLC3 PE=1 SV=1 | 9 | 659 | 8.0E-138 |
sp|Q08844|YO365_YEAST | Uncharacterized membrane protein YOR365C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YOR365C PE=1 SV=1 | 22 | 619 | 3.0E-108 |
sp|Q09917|PKD2_SCHPO | TRP-like ion channel pkd2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pkd2 PE=1 SV=1 | 4 | 614 | 7.0E-105 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|P39719|FLC2_YEAST | Flavin carrier protein 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FLC2 PE=1 SV=2 | 23 | 670 | 1.0E-143 |
sp|Q08967|FLC1_YEAST | Flavin carrier protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FLC1 PE=1 SV=1 | 9 | 674 | 2.0E-143 |
sp|P53121|FLC3_YEAST | Putative flavin carrier protein 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FLC3 PE=1 SV=1 | 9 | 659 | 8.0E-138 |
sp|Q08844|YO365_YEAST | Uncharacterized membrane protein YOR365C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YOR365C PE=1 SV=1 | 22 | 619 | 3.0E-108 |
sp|Q09917|PKD2_SCHPO | TRP-like ion channel pkd2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pkd2 PE=1 SV=1 | 4 | 614 | 7.0E-105 |
sp|O74520|YCPE_SCHPO | Uncharacterized membrane protein C663.14c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC663.14c PE=3 SV=2 | 36 | 554 | 3.0E-27 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
Yes | 1 - 25 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 341 | 363 | 22 |
2 | 384 | 406 | 22 |
3 | 416 | 438 | 22 |
4 | 478 | 500 | 22 |
5 | 504 | 526 | 22 |
6 | 539 | 561 | 22 |
7 | 566 | 588 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >OphauG2|5862 MRSLFHAPLLLLSSMAALLAPAAGEKLLMSNSLNTCQADSSFTASLFNVVYTPNNSSASVNMVATSSVQGKVLFD LSISAYGYQFLRRTLNPCDMNLAGLCPMVAGKIPFGFNLPIDKSAASQIPGIAYNIPDLDATVRVFINMSSTGES IACVEADISNGKTVDLIGVKWATAIIAGLALLSSAIVNGLGHSNTAAHVAANSLSLFGYFQAQAILGLTGVHLPP IVQSWTQDFQWSMGIIRVGFMQDIFTWYQRATGGTPSTIFDSLTTVSVQVAKRSLDYASDAGLSLFRRGLAMMPK AAHSLMRRNNITTGSGSYIVFGIQRVAFRSKIETTNLFMTGLTFFCVFVVLTVVAVSAFKGLCELFVRQRWMDKD KFLEFRNGWLTVLKGILFRVALIGFPQMAILCLWEFTQVDSAAEVVLAVFFFFGLAITLAWGASKVIRIARRSVV MHRNPAYILFSDPQALNKWGFLYIQFRASAYYFIAPVLGYTLIKAMFIAFGQRSGVAQAIGFVIIEALALIGASV LRPWMDKSTNSFNIAICAINFINAIFLLIFSNVFGAPTLVVGVVGVVLFILNAAFALILLIMVIVSTTVTFFRKN PDARYQFMADDRASFMKSQTQLTTTTELDALAATARGDKAGFKSHLDLDDDNESLSSEDLRRRADPHGNNSQNSF HGGPRSPVNPSMPLFPAGGQRPQSPFRADSPNAMAYNRSGSSLGQHRAMNNVSPGGYRAQNSSR* |
Coding | >OphauG2|5862 ATGCGGTCGCTATTCCACGCGCCGCTGCTGCTTCTCTCGTCCATGGCGGCGCTGCTTGCGCCTGCCGCCGGCGAG AAACTCCTCATGTCCAACTCGCTCAATACCTGCCAGGCCGATTCGAGTTTTACTGCCTCGCTCTTCAATGTTGTC TACACACCCAACAATAGCTCAGCCAGTGTCAACATGGTGGCCACGTCGTCGGTTCAGGGCAAGGTGCTCTTTGAC CTCTCCATCTCGGCTTATGGCTACCAGTTTCTCCGCCGCACTCTCAACCCCTGCGACATGAATCTTGCTGGTCTC TGCCCCATGGTGGCGGGCAAGATTCCCTTTGGCTTCAATCTGCCCATTGACAAAAGCGCCGCTAGCCAAATCCCT GGCATTGCATACAACATTCCCGATCTCGATGCCACGGTTCGCGTCTTTATCAACATGTCGTCGACGGGCGAGAGT ATCGCTTGTGTCGAGGCTGACATCTCCAACGGAAAGACTGTCGACCTTATTGGCGTCAAGTGGGCCACGGCCATC ATTGCTGGCCTGGCACTCCTCTCCTCCGCCATTGTCAATGGTCTGGGCCACTCCAACACGGCTGCCCATGTCGCT GCCAACTCGTTGTCGCTCTTTGGTTACTTTCAGGCTCAGGCCATTCTTGGCTTGACCGGTGTCCACCTGCCGCCC ATTGTTCAATCTTGGACTCAAGACTTTCAGTGGTCCATGGGAATCATTCGAGTCGGCTTCATGCAAGATATTTTT ACCTGGTACCAGCGTGCCACTGGTGGTACTCCCTCGACCATTTTTGACTCCCTCACCACCGTCTCGGTTCAGGTT GCCAAGCGCTCCCTCGACTATGCCTCGGATGCCGGCCTCAGCCTCTTTCGACGCGGTCTTGCCATGATGCCCAAG GCCGCCCACAGCCTGATGCGTCGCAACAACATCACCACCGGCTCTGGCTCCTACATTGTCTTTGGCATCCAGCGC GTTGCATTCCGCTCAAAGATTGAGACGACAAATCTCTTCATGACGGGCCTGACCTTTTTCTGTGTCTTTGTCGTC CTCACCGTCGTCGCCGTTTCTGCCTTCAAGGGCCTCTGCGAGCTCTTTGTTCGCCAGCGTTGGATGGACAAGGAC AAGTTTCTCGAGTTCCGCAACGGCTGGCTGACGGTCCTCAAGGGCATCCTCTTCCGCGTTGCCCTTATTGGATTC CCTCAAATGGCCATTCTCTGCCTGTGGGAGTTTACCCAGGTCGACTCTGCTGCAGAGGTCGTCTTGGCCGTCTTC TTCTTCTTTGGTTTGGCCATTACTCTTGCTTGGGGTGCCAGCAAGGTGATACGCATTGCCCGTCGCTCTGTCGTG ATGCACCGCAACCCGGCATACATTCTCTTTTCTGATCCCCAGGCTCTCAACAAATGGGGCTTCCTCTATATCCAG TTTCGTGCGTCGGCTTACTACTTCATCGCCCCCGTTCTCGGCTACACCTTGATCAAGGCCATGTTTATTGCATTT GGCCAGCGCAGTGGCGTCGCCCAGGCCATTGGCTTCGTTATTATCGAGGCCTTGGCTCTTATTGGCGCCTCGGTG CTCCGCCCCTGGATGGACAAGAGCACCAACTCGTTCAACATTGCAATTTGCGCCATCAACTTTATTAATGCCATC TTCCTTTTAATCTTCTCAAACGTCTTTGGCGCTCCGACTCTAGTTGTTGGCGTTGTTGGCGTGGTTTTGTTTATT CTTAATGCCGCTTTTGCTCTAATCCTGCTCATCATGGTTATTGTTTCGACTACCGTTACCTTTTTCCGCAAGAAC CCCGACGCCCGTTACCAGTTCATGGCCGACGACCGCGCGTCATTTATGAAGTCGCAGACGCAACTGACGACGACA ACGGAGCTAGACGCCCTGGCAGCTACGGCCCGTGGAGACAAGGCAGGCTTCAAGTCGCACCTTGATCTCGACGAT GACAACGAGTCACTCTCGTCTGAAGATCTTCGACGCCGTGCAGACCCCCATGGTAACAACTCACAAAACTCTTTC CATGGAGGGCCGCGGTCGCCCGTCAATCCGTCGATGCCCCTGTTTCCCGCAGGGGGTCAGCGGCCACAGAGCCCC TTCCGCGCAGATTCGCCAAATGCCATGGCGTACAATCGGTCTGGGTCGTCGCTCGGGCAACATCGGGCCATGAAC AATGTGAGCCCTGGTGGATATCGTGCGCAAAATTCATCTAGGTGA |
Transcript | >OphauG2|5862 ATGCGGTCGCTATTCCACGCGCCGCTGCTGCTTCTCTCGTCCATGGCGGCGCTGCTTGCGCCTGCCGCCGGCGAG AAACTCCTCATGTCCAACTCGCTCAATACCTGCCAGGCCGATTCGAGTTTTACTGCCTCGCTCTTCAATGTTGTC TACACACCCAACAATAGCTCAGCCAGTGTCAACATGGTGGCCACGTCGTCGGTTCAGGGCAAGGTGCTCTTTGAC CTCTCCATCTCGGCTTATGGCTACCAGTTTCTCCGCCGCACTCTCAACCCCTGCGACATGAATCTTGCTGGTCTC TGCCCCATGGTGGCGGGCAAGATTCCCTTTGGCTTCAATCTGCCCATTGACAAAAGCGCCGCTAGCCAAATCCCT GGCATTGCATACAACATTCCCGATCTCGATGCCACGGTTCGCGTCTTTATCAACATGTCGTCGACGGGCGAGAGT ATCGCTTGTGTCGAGGCTGACATCTCCAACGGAAAGACTGTCGACCTTATTGGCGTCAAGTGGGCCACGGCCATC ATTGCTGGCCTGGCACTCCTCTCCTCCGCCATTGTCAATGGTCTGGGCCACTCCAACACGGCTGCCCATGTCGCT GCCAACTCGTTGTCGCTCTTTGGTTACTTTCAGGCTCAGGCCATTCTTGGCTTGACCGGTGTCCACCTGCCGCCC ATTGTTCAATCTTGGACTCAAGACTTTCAGTGGTCCATGGGAATCATTCGAGTCGGCTTCATGCAAGATATTTTT ACCTGGTACCAGCGTGCCACTGGTGGTACTCCCTCGACCATTTTTGACTCCCTCACCACCGTCTCGGTTCAGGTT GCCAAGCGCTCCCTCGACTATGCCTCGGATGCCGGCCTCAGCCTCTTTCGACGCGGTCTTGCCATGATGCCCAAG GCCGCCCACAGCCTGATGCGTCGCAACAACATCACCACCGGCTCTGGCTCCTACATTGTCTTTGGCATCCAGCGC GTTGCATTCCGCTCAAAGATTGAGACGACAAATCTCTTCATGACGGGCCTGACCTTTTTCTGTGTCTTTGTCGTC CTCACCGTCGTCGCCGTTTCTGCCTTCAAGGGCCTCTGCGAGCTCTTTGTTCGCCAGCGTTGGATGGACAAGGAC AAGTTTCTCGAGTTCCGCAACGGCTGGCTGACGGTCCTCAAGGGCATCCTCTTCCGCGTTGCCCTTATTGGATTC CCTCAAATGGCCATTCTCTGCCTGTGGGAGTTTACCCAGGTCGACTCTGCTGCAGAGGTCGTCTTGGCCGTCTTC TTCTTCTTTGGTTTGGCCATTACTCTTGCTTGGGGTGCCAGCAAGGTGATACGCATTGCCCGTCGCTCTGTCGTG ATGCACCGCAACCCGGCATACATTCTCTTTTCTGATCCCCAGGCTCTCAACAAATGGGGCTTCCTCTATATCCAG TTTCGTGCGTCGGCTTACTACTTCATCGCCCCCGTTCTCGGCTACACCTTGATCAAGGCCATGTTTATTGCATTT GGCCAGCGCAGTGGCGTCGCCCAGGCCATTGGCTTCGTTATTATCGAGGCCTTGGCTCTTATTGGCGCCTCGGTG CTCCGCCCCTGGATGGACAAGAGCACCAACTCGTTCAACATTGCAATTTGCGCCATCAACTTTATTAATGCCATC TTCCTTTTAATCTTCTCAAACGTCTTTGGCGCTCCGACTCTAGTTGTTGGCGTTGTTGGCGTGGTTTTGTTTATT CTTAATGCCGCTTTTGCTCTAATCCTGCTCATCATGGTTATTGTTTCGACTACCGTTACCTTTTTCCGCAAGAAC CCCGACGCCCGTTACCAGTTCATGGCCGACGACCGCGCGTCATTTATGAAGTCGCAGACGCAACTGACGACGACA ACGGAGCTAGACGCCCTGGCAGCTACGGCCCGTGGAGACAAGGCAGGCTTCAAGTCGCACCTTGATCTCGACGAT GACAACGAGTCACTCTCGTCTGAAGATCTTCGACGCCGTGCAGACCCCCATGGTAACAACTCACAAAACTCTTTC CATGGAGGGCCGCGGTCGCCCGTCAATCCGTCGATGCCCCTGTTTCCCGCAGGGGGTCAGCGGCCACAGAGCCCC TTCCGCGCAGATTCGCCAAATGCCATGGCGTACAATCGGTCTGGGTCGTCGCTCGGGCAACATCGGGCCATGAAC AATGTGAGCCCTGGTGGATATCGTGCGCAAAATTCATCTAGGTGA |
Gene | >OphauG2|5862 ATGCGGTCGCTATTCCACGCGCCGCTGCTGCTTCTCTCGTCCATGGCGGCGCTGCTTGCGCCTGCCGCCGGCGAG AAACTCCTCATGTCCAACTCGCTCAATACCTGCCAGGCCGATTCGAGTTTTACTGCCTCGCTCTTCAATGTTGTC TACACACCCAACAATAGCTCAGCCAGTGTCAACATGGTGGCCACGTCGTCGGTTCAGGGCAAGGTGCTCTTTGAC CTCTCCATCTCGGCTTATGGCTACCAGTTTCTCCGCCGCACTCTCAACCCCTGCGACATGAATCTTGCTGGTCTC TGCCCCATGGTGGCGGGCAAGATTCCCTTTGGCTTCAATCTGCCCATTGACAAAAGCGCCGCTAGCCAAATCCCT GGCATTGCATACAACATTCCCGATCTCGATGCCACGGTTCGCGTCTTTATCAACATGTCGTCGACGGGCGAGAGT ATCGCTTGTGTCGAGGCTGACATCTCCAACGGAAAGACTGTCGACCTTATTGGCGTCAAGTGGGCCACGGCCATC ATTGCTGGCCTGGCACTCCTCTCCTCCGCCATTGTCAATGGTCTGGGCCACTCCAACACGGCTGCCCATGTCGCT GCCAACTCGTTGTCGCTCTTTGGTTACTTTCAGGCTCAGGCCATTCTTGGCTTGACCGGTGTCCACCTGCCGCCC ATTGTTCAATCTTGGACTCAAGACTTTCAGTGGTCCATGGGAATCATTCGAGTCGGCTTCATGCAAGATATTTTT ACCTGGTACCAGCGTGCCACTGGTGGTACTCCCTCGACCATTTTTGACTCCCTCACCACCGTCTCGGTTCAGGTT GCCAAGCGCTCCCTCGACTATGCCTCGGATGCCGGCCTCAGCCTCTTTCGACGCGGTCTTGCCATGATGCCCAAG GCCGCCCACAGCCTGATGCGTCGCAACAACATCACCACCGGCTCTGGCTCCTACATTGTCTTTGGCATCCAGCGC GTTGCATTCCGCTCAAAGATTGAGACGACAAATCTCTTCATGACGGGCCTGACCTTTTTCTGTGTCTTTGTCGTC CTCACCGTCGTCGCCGTTTCTGCCTTCAAGGGCCTCTGCGAGCTCTTTGTTCGCCAGCGTTGGATGGACAAGGAC AAGTTTCTCGAGTTCCGCAACGGCTGGCTGACGGTCCTCAAGGGCATCCTCTTCCGCGTTGCCCTTATTGGATTC CCTCAAATGGCCATTCTCTGCCTGTGGGAGTTTACCCAGGTCGACTCTGCTGCAGAGGTCGTCTTGGCCGTCTTC TTCTTCTTTGGTTTGGCCATTACTCTTGCTTGGGGTGCCAGCAAGGTGATACGCATTGCCCGTCGCTCTGTCGTG ATGCACCGCAACCCGGCATACATTCTCTTTTCTGATCCCCAGGCTCTCAACAAATGGGGCTTCCTCTATATCCAG TTTCGTGCGTCGGCTTACTACTTCATCGCCCCCGTTCTCGGCTACACCTTGATCAAGGCCATGTTTATTGCATTT GGCCAGCGCAGTGGCGTCGCCCAGGCCATTGGCTTCGTTATTATCGAGGCCTTGGCTCTTATTGGCGCCTCGGTG CTCCGCCCCTGGATGGACAAGAGCACCAACTCGTTCAACATTGCAATTTGCGCCATCAACTTTATTAATGCCATC TTCCTTTTAATCTTCTCAAACGTCTTTGGCGCTCCGACTCTAGTTGTTGGCGTTGTTGGCGTGGTTTTGTTTATT CTTAATGCCGCTTTTGCTCTAATCCTGCTCATCATGGTTATTGTTTCGACTACCGTTACCTTTTTCCGCAAGAAC CCCGACGCCCGTTACCAGTTCATGGCCGACGACCGCGCGTCATTTATGAAGTCGCAGACGCAACTGACGACGACA ACGGAGCTAGACGCCCTGGCAGCTACGGCCCGTGGAGACAAGGCAGGCTTCAAGTCGCACCTTGATCTCGACGAT GACAACGAGTCACTCTCGTCTGAAGATCTTCGACGCCGTGCAGACCCCCATGGTAACAACTCACAAAACTCTTTC CATGGAGGGCCGCGGTCGCCCGTCAATCCGTCGATGCCCCTGTTTCCCGCAGGGGGTCAGCGGCCACAGAGCCCC TTCCGCGCAGATTCGCCAAATGCCATGGCGTACAATCGGTCTGGGTCGTCGCTCGGGCAACATCGGGCCATGAAC AATGTGAGCCCTGGTGGATATCGTGCGCAAAATTCATCTAGGTGA |