Fungal Genomics

at Utrecht University

General Properties

Protein ID	OphauG2\|5847
Gene name
Location	Contig_563:5270..6286
Strand	-
Gene length (bp)	1016
Transcript length (bp)	942
Coding sequence length (bp)	942
Protein length (aa)	314

PFAM Domains

(None)

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q9US27\|LOA1_SCHPO	Putative lysophosphatidic acid:oleoyl-CoA acyltransferase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vps66 PE=3 SV=2	7	312	2.0E-12

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 24	0.5

Transmembrane Domains

Domain #	Start	End	Length
1	30	52	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>OphauG2\|5847 MTRCARTGIAPFFPIVTPQSTLATLAHGLVFLFRLPLFLTYALSYFLLFHYLPLPVVARKIALWGLMAIPGIWWI DLQLDGVKRGTLSEQPPQRVPHAGSVIASNFTSPIDAIYLAAVFDPVFTVSYPNTRRLQRIGLLGAVLKALGPVC TSPPKGARLVDIQDLIKEHPNRVIAIFPECGTTNGKAILSLSPALAQCPSWVHIFPLSLRYTPSDVTTPVPGKWL TFFWNLLSRPTTCIRVRIAQGHQTDIDNPKHDAQPLRQRNTQVAATLPHEQQFLDRIAEALARLGRVKRVGLTMY NKAEFVAALKQQK*
Coding	>OphauG2\|5847 ATGACACGATGCGCCCGCACGGGCATCGCGCCCTTTTTCCCCATCGTCACTCCGCAGTCCACTCTCGCGACTCTG GCCCATGGCCTCGTCTTCCTCTTCCGCCTGCCCTTGTTCCTCACCTACGCCCTCAGCTACTTTCTCTTGTTCCAC TACCTGCCTCTGCCTGTTGTTGCGCGCAAGATTGCGCTATGGGGGCTCATGGCCATTCCCGGGATATGGTGGATC GATCTTCAGCTCGACGGCGTCAAACGCGGCACTCTCTCTGAGCAGCCTCCCCAGCGCGTCCCCCACGCCGGCTCC GTCATTGCCTCCAACTTTACCAGCCCCATTGACGCCATCTACCTCGCCGCCGTCTTTGACCCCGTCTTCACCGTC TCCTATCCCAACACGCGCCGCCTGCAGCGCATTGGCCTGCTGGGCGCTGTCTTGAAGGCTCTGGGTCCCGTCTGC ACCAGTCCGCCAAAGGGCGCGCGCCTCGTTGATATACAAGACCTCATCAAGGAACATCCCAACCGCGTCATTGCC ATCTTTCCCGAGTGTGGAACGACCAATGGCAAGGCCATCTTGTCCTTGAGCCCGGCTCTGGCCCAGTGTCCCTCG TGGGTGCACATCTTTCCACTCAGCCTTCGATACACTCCTTCCGACGTCACCACTCCGGTCCCGGGCAAGTGGTTG ACCTTTTTCTGGAATCTTCTCTCCCGGCCCACCACTTGTATCAGAGTTCGCATTGCCCAGGGCCACCAGACCGAC ATTGACAATCCAAAACATGACGCCCAACCTCTACGACAGCGTAATACCCAAGTCGCTGCCACTTTGCCTCATGAG CAGCAATTCTTGGATCGAATAGCCGAGGCACTGGCCCGCCTTGGCAGAGTCAAAAGAGTCGGCTTGACCATGTAC AACAAGGCAGAGTTTGTGGCAGCCTTGAAGCAACAAAAGTAA
Transcript	>OphauG2\|5847 ATGACACGATGCGCCCGCACGGGCATCGCGCCCTTTTTCCCCATCGTCACTCCGCAGTCCACTCTCGCGACTCTG GCCCATGGCCTCGTCTTCCTCTTCCGCCTGCCCTTGTTCCTCACCTACGCCCTCAGCTACTTTCTCTTGTTCCAC TACCTGCCTCTGCCTGTTGTTGCGCGCAAGATTGCGCTATGGGGGCTCATGGCCATTCCCGGGATATGGTGGATC GATCTTCAGCTCGACGGCGTCAAACGCGGCACTCTCTCTGAGCAGCCTCCCCAGCGCGTCCCCCACGCCGGCTCC GTCATTGCCTCCAACTTTACCAGCCCCATTGACGCCATCTACCTCGCCGCCGTCTTTGACCCCGTCTTCACCGTC TCCTATCCCAACACGCGCCGCCTGCAGCGCATTGGCCTGCTGGGCGCTGTCTTGAAGGCTCTGGGTCCCGTCTGC ACCAGTCCGCCAAAGGGCGCGCGCCTCGTTGATATACAAGACCTCATCAAGGAACATCCCAACCGCGTCATTGCC ATCTTTCCCGAGTGTGGAACGACCAATGGCAAGGCCATCTTGTCCTTGAGCCCGGCTCTGGCCCAGTGTCCCTCG TGGGTGCACATCTTTCCACTCAGCCTTCGATACACTCCTTCCGACGTCACCACTCCGGTCCCGGGCAAGTGGTTG ACCTTTTTCTGGAATCTTCTCTCCCGGCCCACCACTTGTATCAGAGTTCGCATTGCCCAGGGCCACCAGACCGAC ATTGACAATCCAAAACATGACGCCCAACCTCTACGACAGCGTAATACCCAAGTCGCTGCCACTTTGCCTCATGAG CAGCAATTCTTGGATCGAATAGCCGAGGCACTGGCCCGCCTTGGCAGAGTCAAAAGAGTCGGCTTGACCATGTAC AACAAGGCAGAGTTTGTGGCAGCCTTGAAGCAACAAAAGTAA
Gene	>OphauG2\|5847 ATGACACGATGCGCCCGTCGCCCAGCTTCAAGACCACGCTTGCTCGACTTCTCAGCCTCTAGCTAACCCAAGGCT TGCAAAAATCTCTAGGCACGGGCATCGCGCCCTTTTTCCCCATCGTCACTCCGCAGTCCACTCTCGCGACTCTGG CCCATGGCCTCGTCTTCCTCTTCCGCCTGCCCTTGTTCCTCACCTACGCCCTCAGCTACTTTCTCTTGTTCCACT ACCTGCCTCTGCCTGTTGTTGCGCGCAAGATTGCGCTATGGGGGCTCATGGCCATTCCCGGGATATGGTGGATCG ATCTTCAGCTCGACGGCGTCAAACGCGGCACTCTCTCTGAGCAGCCTCCCCAGCGCGTCCCCCACGCCGGCTCCG TCATTGCCTCCAACTTTACCAGCCCCATTGACGCCATCTACCTCGCCGCCGTCTTTGACCCCGTCTTCACCGTCT CCTATCCCAACACGCGCCGCCTGCAGCGCATTGGCCTGCTGGGCGCTGTCTTGAAGGCTCTGGGTCCCGTCTGCA CCAGTCCGCCAAAGGGCGCGCGCCTCGTTGATATACAAGACCTCATCAAGGAACATCCCAACCGCGTCATTGCCA TCTTTCCCGAGTGTGGAACGACCAATGGCAAGGCCATCTTGTCCTTGAGCCCGGCTCTGGCCCAGTGTCCCTCGT GGGTGCACATCTTTCCACTCAGCCTTCGATACACTCCTTCCGACGTCACCACTCCGGTCCCGGGCAAGTGGTTGA CCTTTTTCTGGAATCTTCTCTCCCGGCCCACCACTTGTATCAGAGTTCGCATTGCCCAGGGCCACCAGACCGACA TTGACAATCCAAAACATGACGCCCAACCTCTACGACAGCGTAATACCCAAGTCGCTGCCACTTTGCCTCATGAGC AGCAATTCTTGGATCGAATAGCCGAGGCACTGGCCCGCCTTGGCAGAGTCAAAAGAGTCGGCTTGACCATGTACA ACAAGGCAGAGTTTGTGGCAGCCTTGAAGCAACAAAAGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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