Fungal Genomics

at Utrecht University

General Properties

Protein ID	OphauG2\|5769
Gene name
Location	Contig_55:33539..34574
Strand	+
Gene length (bp)	1035
Transcript length (bp)	972
Coding sequence length (bp)	972
Protein length (aa)	324

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF04982	HPP	HPP family	2.0E-41	85	209

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q55EF8\|Y9096_DICDI	Transmembrane protein DDB_G0269096 OS=Dictyostelium discoideum GN=DDB_G0269096 PE=4 SV=1	27	213	2.0E-21
sp\|Q556Z9\|Y3361_DICDI	Transmembrane protein DDB_G0273707/DDB_G0273361 OS=Dictyostelium discoideum GN=DDB_G0273707 PE=4 SV=2	52	213	4.0E-18

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 11	0.5

Transmembrane Domains

Domain #	Start	End	Length
1	45	67	22
2	80	100	20
3	110	132	22
4	139	156	17
5	179	201	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>OphauG2\|5769 MTPRHWAWNFDIDGLLNPFVPRPPWRYLPYPIARFLGYRKTKPQATGNVVPIFWSFIGIFCAIIVIEQATKHVSA FEDKGVPTVIVGSFGAAAVLQFYAIESPLAQPRNAIGGQLLASIIGVGIAKLFRLSHRFDDIQWLGGALACSATT ALMGLTKTMHPPAGATALLAVVDKKLLDLGWRLIPVMMLGCALMLGVALLLNNIDRQFPMYWWTPQDLRQGKSIL QRVRENTSPKPPDKSVIDEEKVITTRGSSDDTEAGVLQQPSGLTHEAQDALEAAATGNVVTRRDQEYLIMKHGKV IVPNDMLLSQEEEQLLETMSYRL*
Coding	>OphauG2\|5769 ATGACGCCGCGACATTGGGCGTGGAACTTTGACATTGATGGCCTCCTCAACCCCTTTGTGCCTCGGCCGCCATGG CGCTATCTGCCCTACCCTATAGCCCGTTTCTTGGGCTACCGCAAGACGAAGCCGCAAGCCACTGGCAACGTGGTG CCTATATTTTGGTCCTTTATAGGCATATTCTGCGCCATCATTGTCATTGAGCAGGCAACCAAGCACGTGTCTGCG TTTGAGGACAAGGGTGTGCCCACTGTCATTGTTGGCTCGTTTGGCGCAGCGGCGGTGCTCCAATTCTACGCCATC GAGTCGCCTCTGGCTCAACCCCGCAACGCCATTGGCGGCCAGCTCTTGGCCAGTATCATAGGAGTTGGCATTGCA AAGCTGTTTCGCTTGAGCCATCGTTTTGATGACATTCAATGGCTTGGCGGAGCGTTGGCCTGTTCCGCGACCACG GCTCTCATGGGCCTCACCAAGACTATGCATCCTCCGGCCGGCGCTACGGCACTTCTTGCTGTTGTTGACAAGAAA CTGCTCGACTTGGGCTGGCGCCTCATTCCCGTCATGATGCTCGGATGTGCCCTGATGCTTGGCGTTGCCCTTCTT CTCAACAACATTGACCGTCAATTCCCAATGTACTGGTGGACGCCCCAAGATTTGCGCCAAGGAAAATCAATTCTG CAACGAGTGCGCGAGAACACGTCTCCAAAACCACCCGACAAGTCTGTAATCGACGAGGAAAAGGTAATAACAACG CGCGGTAGCAGCGACGATACAGAAGCTGGCGTATTGCAGCAGCCGTCTGGCCTGACGCACGAGGCACAAGATGCT CTAGAGGCTGCGGCCACAGGCAACGTGGTGACGCGCCGAGATCAAGAGTATCTCATCATGAAGCACGGCAAAGTC ATTGTGCCCAATGACATGCTCTTGTCACAAGAAGAAGAGCAATTGCTAGAAACCATGAGCTACAGACTTTAG
Transcript	>OphauG2\|5769 ATGACGCCGCGACATTGGGCGTGGAACTTTGACATTGATGGCCTCCTCAACCCCTTTGTGCCTCGGCCGCCATGG CGCTATCTGCCCTACCCTATAGCCCGTTTCTTGGGCTACCGCAAGACGAAGCCGCAAGCCACTGGCAACGTGGTG CCTATATTTTGGTCCTTTATAGGCATATTCTGCGCCATCATTGTCATTGAGCAGGCAACCAAGCACGTGTCTGCG TTTGAGGACAAGGGTGTGCCCACTGTCATTGTTGGCTCGTTTGGCGCAGCGGCGGTGCTCCAATTCTACGCCATC GAGTCGCCTCTGGCTCAACCCCGCAACGCCATTGGCGGCCAGCTCTTGGCCAGTATCATAGGAGTTGGCATTGCA AAGCTGTTTCGCTTGAGCCATCGTTTTGATGACATTCAATGGCTTGGCGGAGCGTTGGCCTGTTCCGCGACCACG GCTCTCATGGGCCTCACCAAGACTATGCATCCTCCGGCCGGCGCTACGGCACTTCTTGCTGTTGTTGACAAGAAA CTGCTCGACTTGGGCTGGCGCCTCATTCCCGTCATGATGCTCGGATGTGCCCTGATGCTTGGCGTTGCCCTTCTT CTCAACAACATTGACCGTCAATTCCCAATGTACTGGTGGACGCCCCAAGATTTGCGCCAAGGAAAATCAATTCTG CAACGAGTGCGCGAGAACACGTCTCCAAAACCACCCGACAAGTCTGTAATCGACGAGGAAAAGGTAATAACAACG CGCGGTAGCAGCGACGATACAGAAGCTGGCGTATTGCAGCAGCCGTCTGGCCTGACGCACGAGGCACAAGATGCT CTAGAGGCTGCGGCCACAGGCAACGTGGTGACGCGCCGAGATCAAGAGTATCTCATCATGAAGCACGGCAAAGTC ATTGTGCCCAATGACATGCTCTTGTCACAAGAAGAAGAGCAATTGCTAGAAACCATGAGCTACAGACTTTAG
Gene	>OphauG2\|5769 ATGACGCCGCGACATTGGGCGTGGAACTTTGACATTGATGGCCTCCTCAACCCCTTTGTGCCTCGGCCGCCATGG CGCTATCTGCCCTACCCTATAGCCCGTTTCTTGGGCTACCGCAAGACGAAGCCGCAAGCCACTGGCAACGTGGTG CCTATATTTTGGTCCTTTATAGGCATATTCTGCGCCATCATTGTCATTGAGCAGGCAACCAAGCACGTGTCTGCG TTTGAGGACAAGGGTGTGCCCACTGTCATTGTTGGCTCGTTTGTGAGTCGTGGCACTCATGTGACTTGAGTTGGC TGTATTGTGCTGACCCGACGCATCGAACAGGGCGCAGCGGCGGTGCTCCAATTCTACGCCATCGAGTCGCCTCTG GCTCAACCCCGCAACGCCATTGGCGGCCAGCTCTTGGCCAGTATCATAGGAGTTGGCATTGCAAAGCTGTTTCGC TTGAGCCATCGTTTTGATGACATTCAATGGCTTGGCGGAGCGTTGGCCTGTTCCGCGACCACGGCTCTCATGGGC CTCACCAAGACTATGCATCCTCCGGCCGGCGCTACGGCACTTCTTGCTGTTGTTGACAAGAAACTGCTCGACTTG GGCTGGCGCCTCATTCCCGTCATGATGCTCGGATGTGCCCTGATGCTTGGCGTTGCCCTTCTTCTCAACAACATT GACCGTCAATTCCCAATGTACTGGTGGACGCCCCAAGATTTGCGCCAAGGAAAATCAATTCTGCAACGAGTGCGC GAGAACACGTCTCCAAAACCACCCGACAAGTCTGTAATCGACGAGGAAAAGGTAATAACAACGCGCGGTAGCAGC GACGATACAGAAGCTGGCGTATTGCAGCAGCCGTCTGGCCTGACGCACGAGGCACAAGATGCTCTAGAGGCTGCG GCCACAGGCAACGTGGTGACGCGCCGAGATCAAGAGTATCTCATCATGAAGCACGGCAAAGTCATTGTGCCCAAT GACATGCTCTTGTCACAAGAAGAAGAGCAATTGCTAGAAACCATGAGCTACAGACTTTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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