© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauG2|5755 |
| Gene name | |
| Location | Contig_549:11616..12669 |
| Strand | + |
| Gene length (bp) | 1053 |
| Transcript length (bp) | 939 |
| Coding sequence length (bp) | 939 |
| Protein length (aa) | 313 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF05730 | CFEM | CFEM domain | 2.7E-13 | 28 | 91 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 23 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 100 | 122 | 22 |
| 2 | 184 | 206 | 22 |
| 3 | 213 | 235 | 22 |
| 4 | 259 | 281 | 22 |
| 5 | 294 | 311 | 17 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauG2|5755 MKTGSVARLAGLVALGAPVVVGQMAAQMSELPECAMRCIGGSMSKTQCSVSDAGCLCSDEGFQEVLTECIMHNCT VPEALVAKNTTSDSCGLAPRDRHKTYVAVSNAFGIISGVFLLMRLGFKLWARLDLGWDDGFALATALTGVPSTVF NATVLPRNGIGRDVWTQTPKQITSFARTFYVMEIIYFAEVAFVKLAMLFFYVRIFPAANVRRLLTGTIVFVSLYG VAYVVAAIFQCTPISYHWHQWDGMHHGRCINVNGLAWSNAILSIVLDFCMLAIPLWQLKILRMDWKKKAGVAVMF CVGTLLVVTLSP* |
| Coding | >OphauG2|5755 ATGAAGACGGGGTCAGTGGCGCGGCTGGCCGGCTTGGTGGCCCTGGGCGCCCCAGTGGTGGTTGGGCAGATGGCA GCACAAATGTCAGAGCTGCCCGAGTGTGCTATGAGGTGCATTGGCGGGAGCATGAGCAAGACACAGTGCTCTGTG AGCGACGCGGGCTGCCTGTGCAGTGACGAGGGCTTTCAAGAGGTGCTGACGGAATGCATCATGCACAACTGCACG GTTCCCGAGGCTCTGGTGGCCAAAAACACCACGTCGGACAGCTGCGGGCTCGCGCCGCGCGACCGGCACAAGACG TACGTGGCCGTGTCGAATGCGTTTGGCATCATCTCGGGCGTCTTCCTCCTCATGCGGCTGGGCTTCAAGCTGTGG GCGCGGCTCGACCTTGGGTGGGACGACGGGTTTGCGCTGGCGACGGCTCTGACGGGCGTGCCGAGCACCGTCTTC AACGCCACGGTGCTGCCGCGCAACGGCATCGGGCGCGACGTGTGGACGCAGACGCCCAAGCAAATCACCAGCTTT GCGCGCACCTTTTATGTCATGGAAATCATTTATTTTGCCGAAGTGGCCTTTGTCAAGCTGGCCATGCTCTTCTTT TATGTGCGCATCTTCCCGGCGGCCAACGTGCGGCGGCTGCTGACGGGCACCATTGTCTTTGTGTCGCTGTACGGC GTGGCCTATGTCGTTGCCGCCATCTTCCAGTGCACGCCCATCAGCTACCACTGGCATCAGTGGGACGGGATGCAT CACGGCCGCTGCATCAACGTCAATGGGCTGGCGTGGTCCAATGCCATTCTGAGCATCGTGTTGGATTTCTGCATG CTGGCCATTCCGCTGTGGCAGCTGAAGATTTTGCGCATGGACTGGAAGAAGAAGGCGGGCGTGGCCGTCATGTTT TGCGTCGGCACCTTGTTAGTAGTCACCCTATCCCCCTAG |
| Transcript | >OphauG2|5755 ATGAAGACGGGGTCAGTGGCGCGGCTGGCCGGCTTGGTGGCCCTGGGCGCCCCAGTGGTGGTTGGGCAGATGGCA GCACAAATGTCAGAGCTGCCCGAGTGTGCTATGAGGTGCATTGGCGGGAGCATGAGCAAGACACAGTGCTCTGTG AGCGACGCGGGCTGCCTGTGCAGTGACGAGGGCTTTCAAGAGGTGCTGACGGAATGCATCATGCACAACTGCACG GTTCCCGAGGCTCTGGTGGCCAAAAACACCACGTCGGACAGCTGCGGGCTCGCGCCGCGCGACCGGCACAAGACG TACGTGGCCGTGTCGAATGCGTTTGGCATCATCTCGGGCGTCTTCCTCCTCATGCGGCTGGGCTTCAAGCTGTGG GCGCGGCTCGACCTTGGGTGGGACGACGGGTTTGCGCTGGCGACGGCTCTGACGGGCGTGCCGAGCACCGTCTTC AACGCCACGGTGCTGCCGCGCAACGGCATCGGGCGCGACGTGTGGACGCAGACGCCCAAGCAAATCACCAGCTTT GCGCGCACCTTTTATGTCATGGAAATCATTTATTTTGCCGAAGTGGCCTTTGTCAAGCTGGCCATGCTCTTCTTT TATGTGCGCATCTTCCCGGCGGCCAACGTGCGGCGGCTGCTGACGGGCACCATTGTCTTTGTGTCGCTGTACGGC GTGGCCTATGTCGTTGCCGCCATCTTCCAGTGCACGCCCATCAGCTACCACTGGCATCAGTGGGACGGGATGCAT CACGGCCGCTGCATCAACGTCAATGGGCTGGCGTGGTCCAATGCCATTCTGAGCATCGTGTTGGATTTCTGCATG CTGGCCATTCCGCTGTGGCAGCTGAAGATTTTGCGCATGGACTGGAAGAAGAAGGCGGGCGTGGCCGTCATGTTT TGCGTCGGCACCTTGTTAGTAGTCACCCTATCCCCCTAG |
| Gene | >OphauG2|5755 ATGAAGACGGGGTCAGTGGCGCGGCTGGCCGGCTTGGTGGCCCTGGGCGCCCCAGTGGTGGTTGGGCAGATGGCA GCACAAATGTCAGAGCTGCCCGAGTGTGCTGTATGCCCTTGATGGCCACGTCTCTCCGAGAGCTGGCTCGCTGAC GCTGAGAATGGCAGATGAGGTGCATTGGCGGGAGCATGAGCAAGACACAGTGCTCTGTGAGCGACGCGGGCTGCC TGTGCAGTGACGAGGGCTTTCAAGAGGTGCTGACGGAATGCATCATGCACAACTGCACGGTTCCCGAGGCTCTGG GTAAGTCGAGGACGACGCCAAGGACGACAGCAAGACGACTGACTCGTGTCAACAGTGGCCAAAAACACCACGTCG GACAGCTGCGGGCTCGCGCCGCGCGACCGGCACAAGACGTACGTGGCCGTGTCGAATGCGTTTGGCATCATCTCG GGCGTCTTCCTCCTCATGCGGCTGGGCTTCAAGCTGTGGGCGCGGCTCGACCTTGGGTGGGACGACGGGTTTGCG CTGGCGACGGCTCTGACGGGCGTGCCGAGCACCGTCTTCAACGCCACGGTGCTGCCGCGCAACGGCATCGGGCGC GACGTGTGGACGCAGACGCCCAAGCAAATCACCAGCTTTGCGCGCACCTTTTATGTCATGGAAATCATTTATTTT GCCGAAGTGGCCTTTGTCAAGCTGGCCATGCTCTTCTTTTATGTGCGCATCTTCCCGGCGGCCAACGTGCGGCGG CTGCTGACGGGCACCATTGTCTTTGTGTCGCTGTACGGCGTGGCCTATGTCGTTGCCGCCATCTTCCAGTGCACG CCCATCAGCTACCACTGGCATCAGTGGGACGGGATGCATCACGGCCGCTGCATCAACGTCAATGGGCTGGCGTGG TCCAATGCCATTCTGAGCATCGTGTTGGATTTCTGCATGCTGGCCATTCCGCTGTGGCAGCTGAAGATTTTGCGC ATGGACTGGAAGAAGAAGGCGGGCGTGGCCGTCATGTTTTGCGTCGGCACCTTGTTAGTAGTCACCCTATCCCCC TAG |