Protein ID | OphauG2|5755 |
Gene name | |
Location | Contig_549:11616..12669 |
Strand | + |
Gene length (bp) | 1053 |
Transcript length (bp) | 939 |
Coding sequence length (bp) | 939 |
Protein length (aa) | 313 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF05730 | CFEM | CFEM domain | 2.7E-13 | 28 | 91 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
Yes | 1 - 23 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 100 | 122 | 22 |
2 | 184 | 206 | 22 |
3 | 213 | 235 | 22 |
4 | 259 | 281 | 22 |
5 | 294 | 311 | 17 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >OphauG2|5755 MKTGSVARLAGLVALGAPVVVGQMAAQMSELPECAMRCIGGSMSKTQCSVSDAGCLCSDEGFQEVLTECIMHNCT VPEALVAKNTTSDSCGLAPRDRHKTYVAVSNAFGIISGVFLLMRLGFKLWARLDLGWDDGFALATALTGVPSTVF NATVLPRNGIGRDVWTQTPKQITSFARTFYVMEIIYFAEVAFVKLAMLFFYVRIFPAANVRRLLTGTIVFVSLYG VAYVVAAIFQCTPISYHWHQWDGMHHGRCINVNGLAWSNAILSIVLDFCMLAIPLWQLKILRMDWKKKAGVAVMF CVGTLLVVTLSP* |
Coding | >OphauG2|5755 ATGAAGACGGGGTCAGTGGCGCGGCTGGCCGGCTTGGTGGCCCTGGGCGCCCCAGTGGTGGTTGGGCAGATGGCA GCACAAATGTCAGAGCTGCCCGAGTGTGCTATGAGGTGCATTGGCGGGAGCATGAGCAAGACACAGTGCTCTGTG AGCGACGCGGGCTGCCTGTGCAGTGACGAGGGCTTTCAAGAGGTGCTGACGGAATGCATCATGCACAACTGCACG GTTCCCGAGGCTCTGGTGGCCAAAAACACCACGTCGGACAGCTGCGGGCTCGCGCCGCGCGACCGGCACAAGACG TACGTGGCCGTGTCGAATGCGTTTGGCATCATCTCGGGCGTCTTCCTCCTCATGCGGCTGGGCTTCAAGCTGTGG GCGCGGCTCGACCTTGGGTGGGACGACGGGTTTGCGCTGGCGACGGCTCTGACGGGCGTGCCGAGCACCGTCTTC AACGCCACGGTGCTGCCGCGCAACGGCATCGGGCGCGACGTGTGGACGCAGACGCCCAAGCAAATCACCAGCTTT GCGCGCACCTTTTATGTCATGGAAATCATTTATTTTGCCGAAGTGGCCTTTGTCAAGCTGGCCATGCTCTTCTTT TATGTGCGCATCTTCCCGGCGGCCAACGTGCGGCGGCTGCTGACGGGCACCATTGTCTTTGTGTCGCTGTACGGC GTGGCCTATGTCGTTGCCGCCATCTTCCAGTGCACGCCCATCAGCTACCACTGGCATCAGTGGGACGGGATGCAT CACGGCCGCTGCATCAACGTCAATGGGCTGGCGTGGTCCAATGCCATTCTGAGCATCGTGTTGGATTTCTGCATG CTGGCCATTCCGCTGTGGCAGCTGAAGATTTTGCGCATGGACTGGAAGAAGAAGGCGGGCGTGGCCGTCATGTTT TGCGTCGGCACCTTGTTAGTAGTCACCCTATCCCCCTAG |
Transcript | >OphauG2|5755 ATGAAGACGGGGTCAGTGGCGCGGCTGGCCGGCTTGGTGGCCCTGGGCGCCCCAGTGGTGGTTGGGCAGATGGCA GCACAAATGTCAGAGCTGCCCGAGTGTGCTATGAGGTGCATTGGCGGGAGCATGAGCAAGACACAGTGCTCTGTG AGCGACGCGGGCTGCCTGTGCAGTGACGAGGGCTTTCAAGAGGTGCTGACGGAATGCATCATGCACAACTGCACG GTTCCCGAGGCTCTGGTGGCCAAAAACACCACGTCGGACAGCTGCGGGCTCGCGCCGCGCGACCGGCACAAGACG TACGTGGCCGTGTCGAATGCGTTTGGCATCATCTCGGGCGTCTTCCTCCTCATGCGGCTGGGCTTCAAGCTGTGG GCGCGGCTCGACCTTGGGTGGGACGACGGGTTTGCGCTGGCGACGGCTCTGACGGGCGTGCCGAGCACCGTCTTC AACGCCACGGTGCTGCCGCGCAACGGCATCGGGCGCGACGTGTGGACGCAGACGCCCAAGCAAATCACCAGCTTT GCGCGCACCTTTTATGTCATGGAAATCATTTATTTTGCCGAAGTGGCCTTTGTCAAGCTGGCCATGCTCTTCTTT TATGTGCGCATCTTCCCGGCGGCCAACGTGCGGCGGCTGCTGACGGGCACCATTGTCTTTGTGTCGCTGTACGGC GTGGCCTATGTCGTTGCCGCCATCTTCCAGTGCACGCCCATCAGCTACCACTGGCATCAGTGGGACGGGATGCAT CACGGCCGCTGCATCAACGTCAATGGGCTGGCGTGGTCCAATGCCATTCTGAGCATCGTGTTGGATTTCTGCATG CTGGCCATTCCGCTGTGGCAGCTGAAGATTTTGCGCATGGACTGGAAGAAGAAGGCGGGCGTGGCCGTCATGTTT TGCGTCGGCACCTTGTTAGTAGTCACCCTATCCCCCTAG |
Gene | >OphauG2|5755 ATGAAGACGGGGTCAGTGGCGCGGCTGGCCGGCTTGGTGGCCCTGGGCGCCCCAGTGGTGGTTGGGCAGATGGCA GCACAAATGTCAGAGCTGCCCGAGTGTGCTGTATGCCCTTGATGGCCACGTCTCTCCGAGAGCTGGCTCGCTGAC GCTGAGAATGGCAGATGAGGTGCATTGGCGGGAGCATGAGCAAGACACAGTGCTCTGTGAGCGACGCGGGCTGCC TGTGCAGTGACGAGGGCTTTCAAGAGGTGCTGACGGAATGCATCATGCACAACTGCACGGTTCCCGAGGCTCTGG GTAAGTCGAGGACGACGCCAAGGACGACAGCAAGACGACTGACTCGTGTCAACAGTGGCCAAAAACACCACGTCG GACAGCTGCGGGCTCGCGCCGCGCGACCGGCACAAGACGTACGTGGCCGTGTCGAATGCGTTTGGCATCATCTCG GGCGTCTTCCTCCTCATGCGGCTGGGCTTCAAGCTGTGGGCGCGGCTCGACCTTGGGTGGGACGACGGGTTTGCG CTGGCGACGGCTCTGACGGGCGTGCCGAGCACCGTCTTCAACGCCACGGTGCTGCCGCGCAACGGCATCGGGCGC GACGTGTGGACGCAGACGCCCAAGCAAATCACCAGCTTTGCGCGCACCTTTTATGTCATGGAAATCATTTATTTT GCCGAAGTGGCCTTTGTCAAGCTGGCCATGCTCTTCTTTTATGTGCGCATCTTCCCGGCGGCCAACGTGCGGCGG CTGCTGACGGGCACCATTGTCTTTGTGTCGCTGTACGGCGTGGCCTATGTCGTTGCCGCCATCTTCCAGTGCACG CCCATCAGCTACCACTGGCATCAGTGGGACGGGATGCATCACGGCCGCTGCATCAACGTCAATGGGCTGGCGTGG TCCAATGCCATTCTGAGCATCGTGTTGGATTTCTGCATGCTGGCCATTCCGCTGTGGCAGCTGAAGATTTTGCGC ATGGACTGGAAGAAGAAGGCGGGCGTGGCCGTCATGTTTTGCGTCGGCACCTTGTTAGTAGTCACCCTATCCCCC TAG |