Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauG2|5745
Gene name
LocationContig_547:10351..12122
Strand-
Gene length (bp)1771
Transcript length (bp)1629
Coding sequence length (bp)1629
Protein length (aa) 543

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01490 Aa_trans Transmembrane amino acid transporter protein 6.9E-25 111 513

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|P38680|MTR_NEUCR N amino acid transport system protein OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=mtr PE=3 SV=2 81 537 3.0E-58

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 43 0.45

Transmembrane Domains

Domain # Start End Length
1 119 141 22
2 146 168 22
3 189 211 22
4 226 245 19
5 257 279 22
6 307 329 22
7 341 363 22
8 387 409 22
9 421 443 22
10 453 475 22
11 496 518 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauG2|5745
MASSISKAGSVYNSPSASIAMDHDVEVGIGDKDKKQSSRPVDLSSPAPRFASIFGGKGVRVGPRIAPLPEWLKTD
GAVASPSDDDEAVVTSEDILNRQLASEDGASIQYRTCSWQKTAALLFSEYICLAIMSFPWSYSFLGLVPGLILTV
VIAGIVLYTSLVLWEFCLRHPEVRDVCDLGQMLFWGKSWAWWGTAAMFVLNNTFIQGLHVLVGAEYLNTMTAGSK
VGGCRSVEFAVVVTVICWIASLPRTFSMLSKLGTASAFFTFISVILATVFAGIQGKPAGYNSTLGEPIVTAFPAS
TTNFVKGMAAFLNISYTFIGQITLPSFIAEMRDPREFPKSLWACTIAEILTFSVVGAVMYAYTGNQYTTTPAFGS
LHDLYKKISFSFMIPTIIFLGCLYASVTSRFVFFRLFRNSRHLNDHTVIGWGSWTAILLATWIMAFIISQVIPFF
SSLLSVMSSLFDSWFGFIFWGVAYFRMRRADEEIGRRRRPVFDYMSMAFNIVIILTGIFFLTVGTYASVQGIIDA
FADGTVGGVFSCGTNGV*
Coding >OphauG2|5745
ATGGCTTCTTCCATTTCCAAGGCTGGCTCAGTCTACAATTCGCCCTCAGCCTCCATTGCCATGGACCATGACGTC
GAGGTTGGCATTGGCGACAAGGACAAGAAGCAATCGTCTAGACCAGTCGATTTATCCTCGCCGGCTCCGCGGTTT
GCCTCCATCTTTGGCGGCAAGGGTGTCCGTGTCGGTCCACGCATTGCTCCCTTGCCCGAGTGGCTCAAGACTGAT
GGTGCCGTTGCATCGCCCTCGGATGACGACGAAGCAGTCGTGACGAGCGAGGACATCCTCAACCGCCAACTTGCT
TCTGAGGATGGCGCGTCGATACAGTATCGCACCTGCAGCTGGCAAAAGACGGCCGCCCTGCTCTTCAGTGAATAC
ATCTGCCTGGCCATTATGAGCTTTCCCTGGTCATATAGTTTTCTCGGCCTCGTCCCCGGGCTCATCCTCACTGTC
GTTATTGCCGGCATTGTGCTCTACACCAGCCTCGTCCTCTGGGAGTTTTGCCTGCGCCATCCCGAGGTGCGCGAT
GTCTGTGATCTTGGCCAAATGCTCTTTTGGGGCAAGTCTTGGGCCTGGTGGGGAACGGCTGCCATGTTTGTCCTC
AACAACACCTTTATCCAAGGCCTCCACGTCTTGGTTGGCGCAGAGTACCTCAACACCATGACGGCCGGCTCCAAG
GTTGGCGGCTGTCGCTCTGTTGAATTCGCCGTTGTCGTTACCGTCATTTGCTGGATCGCTTCCCTGCCACGCACC
TTTAGCATGCTTTCCAAGCTGGGAACAGCCTCGGCCTTCTTTACCTTTATTTCCGTCATTCTCGCCACCGTCTTT
GCCGGCATCCAGGGAAAGCCAGCCGGGTATAACAGCACCCTTGGAGAGCCCATTGTCACAGCCTTCCCGGCCTCC
ACCACAAACTTTGTCAAGGGCATGGCTGCATTTCTCAACATTAGCTACACATTTATTGGCCAGATTACCCTGCCC
AGTTTTATTGCTGAGATGCGAGATCCACGAGAATTCCCAAAGTCGCTTTGGGCATGCACCATTGCCGAGATTCTC
ACCTTTAGCGTCGTCGGGGCCGTCATGTATGCCTACACGGGCAACCAGTACACGACGACGCCGGCTTTTGGCTCC
TTGCACGACCTGTACAAGAAGATATCATTTTCCTTCATGATACCCACCATTATCTTTTTGGGCTGTCTGTACGCC
TCGGTGACGTCTCGCTTCGTCTTTTTCCGACTCTTTCGCAACTCGCGCCACCTCAACGACCATACCGTCATTGGA
TGGGGCTCATGGACCGCCATCTTGCTCGCTACATGGATTATGGCCTTTATCATTTCTCAAGTTATTCCCTTTTTT
TCATCCCTCCTGTCTGTCATGTCATCGCTTTTCGACAGCTGGTTCGGCTTTATATTCTGGGGCGTGGCCTACTTT
CGCATGCGACGTGCCGATGAAGAAATCGGCCGCCGACGCCGCCCTGTTTTCGACTACATGTCAATGGCATTCAAT
ATTGTCATTATCCTGACGGGCATATTCTTCCTCACCGTCGGCACGTATGCCAGCGTACAAGGCATCATTGACGCT
TTTGCCGACGGTACTGTTGGGGGAGTGTTTTCATGCGGCACTAACGGCGTTTGA
Transcript >OphauG2|5745
ATGGCTTCTTCCATTTCCAAGGCTGGCTCAGTCTACAATTCGCCCTCAGCCTCCATTGCCATGGACCATGACGTC
GAGGTTGGCATTGGCGACAAGGACAAGAAGCAATCGTCTAGACCAGTCGATTTATCCTCGCCGGCTCCGCGGTTT
GCCTCCATCTTTGGCGGCAAGGGTGTCCGTGTCGGTCCACGCATTGCTCCCTTGCCCGAGTGGCTCAAGACTGAT
GGTGCCGTTGCATCGCCCTCGGATGACGACGAAGCAGTCGTGACGAGCGAGGACATCCTCAACCGCCAACTTGCT
TCTGAGGATGGCGCGTCGATACAGTATCGCACCTGCAGCTGGCAAAAGACGGCCGCCCTGCTCTTCAGTGAATAC
ATCTGCCTGGCCATTATGAGCTTTCCCTGGTCATATAGTTTTCTCGGCCTCGTCCCCGGGCTCATCCTCACTGTC
GTTATTGCCGGCATTGTGCTCTACACCAGCCTCGTCCTCTGGGAGTTTTGCCTGCGCCATCCCGAGGTGCGCGAT
GTCTGTGATCTTGGCCAAATGCTCTTTTGGGGCAAGTCTTGGGCCTGGTGGGGAACGGCTGCCATGTTTGTCCTC
AACAACACCTTTATCCAAGGCCTCCACGTCTTGGTTGGCGCAGAGTACCTCAACACCATGACGGCCGGCTCCAAG
GTTGGCGGCTGTCGCTCTGTTGAATTCGCCGTTGTCGTTACCGTCATTTGCTGGATCGCTTCCCTGCCACGCACC
TTTAGCATGCTTTCCAAGCTGGGAACAGCCTCGGCCTTCTTTACCTTTATTTCCGTCATTCTCGCCACCGTCTTT
GCCGGCATCCAGGGAAAGCCAGCCGGGTATAACAGCACCCTTGGAGAGCCCATTGTCACAGCCTTCCCGGCCTCC
ACCACAAACTTTGTCAAGGGCATGGCTGCATTTCTCAACATTAGCTACACATTTATTGGCCAGATTACCCTGCCC
AGTTTTATTGCTGAGATGCGAGATCCACGAGAATTCCCAAAGTCGCTTTGGGCATGCACCATTGCCGAGATTCTC
ACCTTTAGCGTCGTCGGGGCCGTCATGTATGCCTACACGGGCAACCAGTACACGACGACGCCGGCTTTTGGCTCC
TTGCACGACCTGTACAAGAAGATATCATTTTCCTTCATGATACCCACCATTATCTTTTTGGGCTGTCTGTACGCC
TCGGTGACGTCTCGCTTCGTCTTTTTCCGACTCTTTCGCAACTCGCGCCACCTCAACGACCATACCGTCATTGGA
TGGGGCTCATGGACCGCCATCTTGCTCGCTACATGGATTATGGCCTTTATCATTTCTCAAGTTATTCCCTTTTTT
TCATCCCTCCTGTCTGTCATGTCATCGCTTTTCGACAGCTGGTTCGGCTTTATATTCTGGGGCGTGGCCTACTTT
CGCATGCGACGTGCCGATGAAGAAATCGGCCGCCGACGCCGCCCTGTTTTCGACTACATGTCAATGGCATTCAAT
ATTGTCATTATCCTGACGGGCATATTCTTCCTCACCGTCGGCACGTATGCCAGCGTACAAGGCATCATTGACGCT
TTTGCCGACGGTACTGTTGGGGGAGTGTTTTCATGCGGCACTAACGGCGTTTGA
Gene >OphauG2|5745
ATGGCTTCTTCCATTTCCAAGGCTGGCTCAGTCTACAATTCGCCCTCAGCCTCCATTGCCATGGACCATGACGTC
GAGGTTGGCATTGGCGACAAGGACAAGAAGCAATCGTCTAGACCAGTCGATTTATCCTCGCCGGCTCCGCGGTTT
GCCTCCATCTTTGGCGGCAAGGGTGTCCGTGTCGGTCCACGCATTGCTCCCTTGCCCGAGTGGCTCAAGACTGAT
GGTGCCGTTGCATCGCCCTCGGATGACGACGAAGCAGTCGTGACGAGCGAGGACATCCTCAACCGCCAACTTGCT
TCTGAGGATGGCGCGTCGATACAGTATCGCACCTGCAGCTGGCAAAAGACGGCCGCCCTGCTCTTCAGTGAATAC
ATCTGCCTGGCCATTATGAGCTTTCCCTGGTCATATAGTTTTCTCGGCCTCGTCCCCGGGCTCATCCTCACTGTC
GTTATTGCCGGCATTGTGCTCTACACCAGCCTCGTCCTCTGGGAGTTTTGCCTGCGCCATCCCGAGGTGCGCGAT
GTCTGTGATCTTGGCCAAATGCTCTTTTGGGGCAAGTCTTGGGCCTGGTGGGGAACGGCTGCCATGTTTGTCCTC
AACAACACCTTTATCCAAGGCCTCCACGTCTTGGTTGGCGCAGAGTACCTCAACACCATGACGGCCGGCTCCAAG
GTTGGCGGCTGTCGCTCTGTTGAATTCGCCGTTGTCGTTACCGTCATTTGCTGGATCGCTTCCCTGCCACGCACC
TTTAGCATGCTTTCCAAGCTGGGAACAGCCTCGGCCTTCTTTACCTTTATTTCCGTCATTCTCGCCACCGTCTTT
GCCGGCATCCAGGGAAAGCCAGCCGGGTATAACAGCACCCTTGGAGAGCCCATTGTCACAGCCTTCCCGGCCTCC
ACCACAAACTTTGTCAAGGGCATGGCTGCATTTCTCAACATTAGCTACACATTTATTGGCCAGATTACCCTGCCC
AGTTTTATTGCTGAGATGCGAGATCCACGGTAAACCTTGATACAGACTCTGGTTCTTTGTCCCCCCTTGCCCCGA
ATATTGGAACTGATTTTTGTGTGCGCCAGAGAATTCCCAAAGTCGCTTTGGGCATGCACCATTGCCGAGATTCTC
ACCTTTAGCGTCGTCGGGGCCGTCATGTATGCCTACACGGGCAACCAGTACACGACGACGCCGGCTTTTGGCTCC
TTGCACGACCTGTACAAGAAGATATCATTTTCCTTCATGATACCCACCATTATCTTTTTGGGCTGTCTGTACGCC
TCGGTGACGTCTCGCTTCGTCTTTTTCCGACTCTTTCGCAACTCGCGCCACCTCAACGACCATACCGTCATTGGA
TGGGGCTCATGGACCGCCATCTTGCTCGCTACATGGATTATGGCCTTTATCATTTCTCAAGTTATTCCCTTTTTT
TCATCCCGTGAGTACATGGCCTGATGTGCATCAACGCGGTGAGAGAGAATAGTGGCTTACACAACGCTCGGCAGT
CCTGTCTGTCATGTCATCGCTTTTCGACAGCTGGTTCGGCTTTATATTCTGGGGCGTGGCCTACTTTCGCATGCG
ACGTGCCGATGAAGAAATCGGCCGCCGACGCCGCCCTGTTTTCGACTACATGTCAATGGCATTCAATATTGTCAT
TATCCTGACGGGCATATTCTTCCTCACCGTCGGCACGTATGCCAGCGTACAAGGCATCATTGACGCTTTTGCCGA
CGGTACTGTTGGGGGAGTGTTTTCATGCGGCACTAACGGCGTTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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