Fungal Genomics

at Utrecht University

General Properties

Protein ID	OphauG2\|5739
Gene name
Location	Contig_546:10978..12303
Strand	-
Gene length (bp)	1325
Transcript length (bp)	1116
Coding sequence length (bp)	1116
Protein length (aa)	372

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF01370	Epimerase	NAD dependent epimerase/dehydratase family	5.4E-15	8	230
PF04321	RmlD_sub_bind	RmlD substrate binding domain	9.7E-07	8	192

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 23	0.5

Transmembrane Domains

Domain #	Start	End	Length
1	7	26	19

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>OphauG2\|5739 MANDKPSVLIIGGLGYIGRFLALYIHEKQLASEVRLVDKVLPQLAWLAPEFAEACSQDKFMQADASKAEALARIF DRPNAEEWDWVFNCGGETRYSQDDEVYKLRSLNLSLAVGREAAKRKVKVFVELSTGMVYKSDSQPSKEKDKLKPW SKIAVFKLQAEEQLLNLVIVRLPHVYGPYASQWIGTALCMARVYQHLEGEMKWLWSKDLRTNTLHIHDTTRALWA IAAWFVAGKVNWTSAETGPVPIFNVVDKGQTTQGTIAGVIGDLFNIETGFQGQFISTFARLNLDRVVDDVNEETL GPWAELLHTADITRPGPLSPFMEKELLKDTDLSMDGSLLEKVVGFEYEKPAVSRKLVEEVVESYKKMKWWP*
Coding	>OphauG2\|5739 ATGGCCAACGACAAGCCGTCAGTCCTCATCATCGGCGGTCTCGGCTACATTGGCCGCTTCCTGGCGCTCTACATC CACGAGAAGCAGCTGGCGTCCGAGGTCCGGCTGGTGGACAAGGTGTTGCCTCAGCTTGCATGGCTTGCTCCCGAA TTCGCCGAGGCGTGTTCCCAAGACAAATTCATGCAAGCCGACGCCAGCAAAGCCGAGGCGCTCGCTCGAATATTC GATCGCCCCAACGCTGAGGAGTGGGATTGGGTCTTCAACTGCGGAGGCGAGACGCGATATTCCCAAGATGACGAG GTCTATAAGCTCCGGTCGCTCAATCTGTCTCTAGCTGTGGGTAGAGAGGCGGCCAAGCGCAAGGTCAAGGTGTTT GTTGAACTCAGCACGGGCATGGTCTACAAATCCGACTCGCAACCAAGCAAGGAGAAGGACAAGCTCAAACCATGG AGTAAAATTGCCGTCTTCAAGTTGCAGGCAGAGGAGCAACTCCTGAACCTCGTTATTGTGCGCTTGCCTCATGTT TATGGTCCGTATGCTTCTCAATGGATTGGAACAGCACTGTGCATGGCGCGCGTCTACCAGCACCTCGAAGGCGAG ATGAAGTGGCTATGGTCCAAAGATCTGCGGACCAACACTCTTCATATTCACGACACGACGCGTGCACTCTGGGCC ATTGCTGCATGGTTTGTAGCAGGCAAGGTCAACTGGACTAGCGCCGAGACGGGCCCGGTACCCATATTCAACGTG GTGGACAAGGGCCAGACGACCCAAGGCACCATTGCCGGTGTCATTGGCGATCTTTTCAACATTGAGACGGGCTTC CAGGGCCAGTTCATCAGCACCTTTGCCCGGCTCAATCTCGACCGCGTCGTCGACGACGTCAATGAGGAGACGCTG GGCCCGTGGGCAGAGCTGCTTCACACAGCCGACATCACGCGCCCAGGTCCACTGTCCCCATTTATGGAAAAGGAA CTACTCAAGGACACTGACCTTAGTATGGACGGAAGCCTGTTGGAAAAGGTGGTGGGCTTTGAGTACGAGAAACCG GCCGTGTCTAGGAAATTGGTGGAAGAGGTGGTTGAGAGTTACAAGAAGATGAAGTGGTGGCCTTGA
Transcript	>OphauG2\|5739 ATGGCCAACGACAAGCCGTCAGTCCTCATCATCGGCGGTCTCGGCTACATTGGCCGCTTCCTGGCGCTCTACATC CACGAGAAGCAGCTGGCGTCCGAGGTCCGGCTGGTGGACAAGGTGTTGCCTCAGCTTGCATGGCTTGCTCCCGAA TTCGCCGAGGCGTGTTCCCAAGACAAATTCATGCAAGCCGACGCCAGCAAAGCCGAGGCGCTCGCTCGAATATTC GATCGCCCCAACGCTGAGGAGTGGGATTGGGTCTTCAACTGCGGAGGCGAGACGCGATATTCCCAAGATGACGAG GTCTATAAGCTCCGGTCGCTCAATCTGTCTCTAGCTGTGGGTAGAGAGGCGGCCAAGCGCAAGGTCAAGGTGTTT GTTGAACTCAGCACGGGCATGGTCTACAAATCCGACTCGCAACCAAGCAAGGAGAAGGACAAGCTCAAACCATGG AGTAAAATTGCCGTCTTCAAGTTGCAGGCAGAGGAGCAACTCCTGAACCTCGTTATTGTGCGCTTGCCTCATGTT TATGGTCCGTATGCTTCTCAATGGATTGGAACAGCACTGTGCATGGCGCGCGTCTACCAGCACCTCGAAGGCGAG ATGAAGTGGCTATGGTCCAAAGATCTGCGGACCAACACTCTTCATATTCACGACACGACGCGTGCACTCTGGGCC ATTGCTGCATGGTTTGTAGCAGGCAAGGTCAACTGGACTAGCGCCGAGACGGGCCCGGTACCCATATTCAACGTG GTGGACAAGGGCCAGACGACCCAAGGCACCATTGCCGGTGTCATTGGCGATCTTTTCAACATTGAGACGGGCTTC CAGGGCCAGTTCATCAGCACCTTTGCCCGGCTCAATCTCGACCGCGTCGTCGACGACGTCAATGAGGAGACGCTG GGCCCGTGGGCAGAGCTGCTTCACACAGCCGACATCACGCGCCCAGGTCCACTGTCCCCATTTATGGAAAAGGAA CTACTCAAGGACACTGACCTTAGTATGGACGGAAGCCTGTTGGAAAAGGTGGTGGGCTTTGAGTACGAGAAACCG GCCGTGTCTAGGAAATTGGTGGAAGAGGTGGTTGAGAGTTACAAGAAGATGAAGTGGTGGCCTTGA
Gene	>OphauG2\|5739 ATGGCCAACGACAAGCCGTCAGTCCTCATCATCGGCGGTCTCGGCTACATTGGCCGCTTCCTGGCGCTCTACATC CACGAGAAGCAGCTGGCGTCCGAGGTCCGGCTGGTGGACAAGGTGTTGCCTCAGCTTGCATGGCTTGCTCCCGAA TTCGCCGAGGCGTGTTCCCAAGACAAATTCATGCAAGCCGACGCCAGCAAAGCCGGTCAGTAGCAACGCACCCGC ATATGCGCATGCATCCCCCCATGATGGTGCCTGCAGCTCCTCCCATCGATTCGCTTCCGAATTAAACTGGCATGC AAATGTGCAGACTGCTGACGCTTGCGTAGAGGCGCTCGCTCGAATATTCGATCGCCCCAACGCTGAGGAGTGGGA TTGGGTCTTCAACTGCGGAGGCGAGACGCGATATTCCCAAGATGACGAGGTCTATAAGCTCCGGTCGCTCAATCT GTCTCTAGCTGTGGGTAGAGAGGCGGCCAAGCGCAAGGTCAAGGTGTTTGTTGAACTCAGCACGGGCATGGTCTA CAAATCCGACTCGCAACCAAGCAAGGAGAAGGACAAGCTCAAACCATGGAGTAAAATTGCCGTCTTCAAGTTGCA GGCAGAGGAGCAACTGTCCAAGATTGAGGGGCAAGTTGTCACGAGTACCTCTTGTTGCAAGGAATCCCACAACGC TGACTTGATGTGCTCCTCCATACAGCCTGAACCTCGTTATTGTGCGCTTGCCTCATGTTTATGGTCCGTATGCTT CTCAATGGATTGGAACAGCACTGTGCATGGCGCGCGTCTACCAGCACCTCGAAGGCGAGATGAAGTGGCTATGGT CCAAAGATCTGCGGACCAACACTCTTCATATTCACGACACGACGCGTGCACTCTGGGCCATTGCTGCATGGTTTG TAGCAGGCAAGGTCAACTGGACTAGCGCCGAGACGGGCCCGGTACCCATATTCAACGTGGTGGACAAGGGCCAGA CGACCCAAGGCACCATTGCCGGTGTCATTGGCGATCTTTTCAACATTGAGACGGGCTTCCAGGGCCAGTTCATCA GCACCTTTGCCCGGCTCAATCTCGACCGCGTCGTCGACGACGTCAATGAGGAGACGCTGGGCCCGTGGGCAGAGC TGCTTCACACAGCCGACATCACGCGCCCAGGTCCACTGTCCCCATTTATGGAAAAGGAACTACTCAAGGACACTG ACCTTAGTATGGACGGAAGCCTGTTGGAAAAGGTGGTGGGCTTTGAGTACGAGAAACCGGCCGTGTCTAGGAAAT TGGTGGAAGAGGTGGTTGAGAGTTACAAGAAGATGAAGTGGTGGCCTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail