Fungal Genomics

at Utrecht University

General Properties

Protein ID	OphauG2\|5643
Gene name
Location	Contig_53:4661..5213
Strand	+
Gene length (bp)	552
Transcript length (bp)	438
Coding sequence length (bp)	438
Protein length (aa)	146

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF04991	LicD	LicD family	5.7E-07	57	109

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 48	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>OphauG2\|5643 MTVYYYQYRDMHPGRYFLLDINPHFRHRQDDDILNFIDARWIDMSTGLFIDITAARYALEHHAGQGMLYDKNGHE YRDTYLYPLRNTTFENVPAKIPFRYREMLESEYGKRALTNTRFHKHVFDQDGMQWVQEAEEEKVEEAIYA*
Coding	>OphauG2\|5643 ATGACTGTCTACTATTACCAATACCGCGATATGCACCCGGGACGCTACTTTCTCCTAGACATCAATCCGCACTTT CGTCATCGCCAAGACGATGATATACTCAACTTTATAGATGCTCGATGGATAGACATGTCGACAGGGCTCTTTATT GACATTACAGCCGCCAGGTATGCCCTTGAACACCATGCCGGCCAGGGCATGCTGTATGATAAGAACGGCCATGAA TATCGCGATACCTACCTTTACCCCTTGCGCAACACCACGTTTGAGAACGTACCAGCCAAGATTCCCTTTCGCTAC AGGGAAATGCTCGAGTCCGAGTATGGCAAAAGAGCCCTGACCAATACCCGTTTCCACAAACATGTATTTGATCAA GACGGCATGCAATGGGTACAAGAAGCAGAAGAAGAAAAAGTAGAGGAAGCCATTTATGCTTAG
Transcript	>OphauG2\|5643 ATGACTGTCTACTATTACCAATACCGCGATATGCACCCGGGACGCTACTTTCTCCTAGACATCAATCCGCACTTT CGTCATCGCCAAGACGATGATATACTCAACTTTATAGATGCTCGATGGATAGACATGTCGACAGGGCTCTTTATT GACATTACAGCCGCCAGGTATGCCCTTGAACACCATGCCGGCCAGGGCATGCTGTATGATAAGAACGGCCATGAA TATCGCGATACCTACCTTTACCCCTTGCGCAACACCACGTTTGAGAACGTACCAGCCAAGATTCCCTTTCGCTAC AGGGAAATGCTCGAGTCCGAGTATGGCAAAAGAGCCCTGACCAATACCCGTTTCCACAAACATGTATTTGATCAA GACGGCATGCAATGGGTACAAGAAGCAGAAGAAGAAAAAGTAGAGGAAGCCATTTATGCTTAG
Gene	>OphauG2\|5643 ATGACTGTCTACTATTACCAATACCGCGATATGCACCCGGGACGCTACTTTCTCCTAGACATCAATCCGCACTTT CGTCATCGCCAAGACGATGATATACTCAACTTTATAGATGCTCGATGGATAGACATGTCGACAGGGCTCTTTATT GACATTACAGCCGCCAGGTATGCCCTTGAACACCATGCCGGCCAGGGCATGCTGTATGATAAGAACGGCCATGAA TATCGCGTAGGTGACGTCTTTACCACTTTGCTTACACGAGCCCCAAACTGGCTGACCAGAGACACTCAGGATACC TACCTTTACCCCTTGCGCAACACCACGTTTGAGAACGTACCAGCCAAGATTCCCTTTCGCTACAGGGAAATGCTC GAGTCCGAGTATGGCAAAAGAGCCCTGACCAATACCCGTTTCCACAAGTATGTATCCTACTTGGTCTTGGATAGG TGTTTGTATCTGACGTTTTGTAGACATGTATTTGATCAAGACGGCATGCAATGGGTACAAGAAGCAGAAGAAGAA AAAGTAGAGGAAGCCATTTATGCTTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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