Fungal Genomics

at Utrecht University

General Properties

Protein ID	OphauG2\|5574
Gene name
Location	Contig_519:7750..9255
Strand	-
Gene length (bp)	1505
Transcript length (bp)	1431
Coding sequence length (bp)	1431
Protein length (aa)	477

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF01490	Aa_trans	Transmembrane amino acid transporter protein	8.1E-50	60	454

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|P38680\|MTR_NEUCR	N amino acid transport system protein OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=mtr PE=3 SV=2	44	475	1.0E-152

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 12	0.45

Transmembrane Domains

Domain #	Start	End	Length
1	63	85	22
2	89	111	22
3	131	153	22
4	168	190	22
5	199	221	22
6	241	260	19
7	281	303	22
8	323	345	22
9	366	388	22
10	393	415	22
11	436	458	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>OphauG2\|5574 MALSPTKSTNADFSQDTTCSLADHPLSQDGLSEKPSHHQTPRVGQVCEITLEKQQDTTHRLGWIRLTFALVVESV ALGSLSLPAAFATLGMVASVICCIGLGLVAIYTGFLVGKVKLRYPHVAHYADSGRLLMGNFGYELFGAMFSLSIV FVIASHVLTGTIAFVNITNSGLCSAIFGFISTLLLLILAIPPSFADIAILGYIDFVSILAAIGLTMIATGIQASK ASGLSASNWSAWPKPGITFIDAFVAIANIIFAYTFCVGQFSFMDEMHTPRDFMKSIWLLGVLEISIYTLTGAIIY SFVGVDVKSPALLSAGDQISKIAFGIALPVIFISGSINTTILGRYFHGRIFEKNSPDYYVKTPKGWAVWLIIVTC ISFAAFLIAELIPFFNPLLSLLSSLFVSGFCFYLPAIMWYRLLRHGSWYARKNIANSLMSLLSFLVGVIVLVCGT YASVANIIQLFQEGDIGEVFTCKPVG*
Coding	>OphauG2\|5574 ATGGCTTTGTCTCCCACTAAATCCACAAATGCCGACTTCTCTCAAGACACCACCTGCTCTCTTGCAGACCACCCA CTCTCTCAAGACGGCCTTTCTGAAAAACCCTCTCACCACCAAACCCCTCGCGTCGGCCAAGTCTGCGAGATAACC CTCGAAAAGCAACAAGACACCACACATCGCCTTGGCTGGATACGTCTGACCTTTGCCCTCGTCGTCGAGAGCGTT GCCCTCGGCAGCCTCAGTCTTCCCGCCGCCTTTGCTACCCTTGGAATGGTGGCCAGCGTTATTTGCTGCATTGGC CTAGGCCTCGTCGCCATCTACACTGGCTTTCTCGTCGGCAAAGTCAAGCTACGATATCCACACGTTGCCCACTAT GCTGACAGCGGCCGCTTGCTCATGGGTAACTTTGGCTACGAGCTCTTTGGCGCCATGTTTTCCCTCTCAATCGTC TTTGTCATTGCCTCTCATGTCCTTACCGGCACCATTGCCTTTGTTAATATTACAAACAGTGGCCTATGCTCGGCC ATCTTCGGCTTCATATCAACCCTCCTTCTTCTCATTCTCGCTATTCCGCCCTCCTTTGCAGACATAGCTATTCTA GGCTATATTGACTTTGTTTCCATCCTGGCTGCTATTGGCCTGACCATGATTGCCACTGGCATTCAGGCCAGTAAA GCCTCTGGTCTTTCGGCTAGCAACTGGTCTGCTTGGCCAAAACCGGGCATTACCTTTATCGACGCCTTTGTTGCT ATTGCTAATATTATATTTGCTTATACTTTTTGCGTCGGCCAGTTTTCATTCATGGATGAAATGCACACACCCAGA GACTTTATGAAATCTATATGGCTGCTCGGCGTCCTCGAGATTTCAATCTACACCCTCACCGGCGCTATTATATAC TCCTTTGTCGGTGTTGACGTCAAGTCACCAGCGCTTCTCTCGGCCGGCGACCAGATATCCAAGATAGCTTTTGGT ATCGCTTTACCCGTCATTTTTATTTCTGGCTCCATCAACACTACCATTCTCGGTCGATATTTTCATGGACGCATC TTCGAAAAGAACTCGCCCGACTACTACGTCAAGACGCCCAAGGGCTGGGCTGTCTGGTTAATCATTGTTACTTGT ATCTCCTTTGCAGCCTTTCTCATTGCCGAGCTCATTCCCTTTTTCAACCCTTTGCTTTCTCTGCTTTCTTCGCTC TTTGTTTCTGGCTTTTGCTTCTACTTGCCAGCCATTATGTGGTATCGACTGCTGCGCCACGGCAGCTGGTATGCC AGAAAAAACATTGCAAACAGTCTCATGAGTCTCCTTTCTTTTCTTGTTGGTGTCATTGTCCTCGTATGTGGAACT TATGCAAGCGTGGCCAATATTATACAATTGTTTCAAGAAGGCGACATTGGCGAGGTTTTTACCTGCAAGCCTGTT GGATAA
Transcript	>OphauG2\|5574 ATGGCTTTGTCTCCCACTAAATCCACAAATGCCGACTTCTCTCAAGACACCACCTGCTCTCTTGCAGACCACCCA CTCTCTCAAGACGGCCTTTCTGAAAAACCCTCTCACCACCAAACCCCTCGCGTCGGCCAAGTCTGCGAGATAACC CTCGAAAAGCAACAAGACACCACACATCGCCTTGGCTGGATACGTCTGACCTTTGCCCTCGTCGTCGAGAGCGTT GCCCTCGGCAGCCTCAGTCTTCCCGCCGCCTTTGCTACCCTTGGAATGGTGGCCAGCGTTATTTGCTGCATTGGC CTAGGCCTCGTCGCCATCTACACTGGCTTTCTCGTCGGCAAAGTCAAGCTACGATATCCACACGTTGCCCACTAT GCTGACAGCGGCCGCTTGCTCATGGGTAACTTTGGCTACGAGCTCTTTGGCGCCATGTTTTCCCTCTCAATCGTC TTTGTCATTGCCTCTCATGTCCTTACCGGCACCATTGCCTTTGTTAATATTACAAACAGTGGCCTATGCTCGGCC ATCTTCGGCTTCATATCAACCCTCCTTCTTCTCATTCTCGCTATTCCGCCCTCCTTTGCAGACATAGCTATTCTA GGCTATATTGACTTTGTTTCCATCCTGGCTGCTATTGGCCTGACCATGATTGCCACTGGCATTCAGGCCAGTAAA GCCTCTGGTCTTTCGGCTAGCAACTGGTCTGCTTGGCCAAAACCGGGCATTACCTTTATCGACGCCTTTGTTGCT ATTGCTAATATTATATTTGCTTATACTTTTTGCGTCGGCCAGTTTTCATTCATGGATGAAATGCACACACCCAGA GACTTTATGAAATCTATATGGCTGCTCGGCGTCCTCGAGATTTCAATCTACACCCTCACCGGCGCTATTATATAC TCCTTTGTCGGTGTTGACGTCAAGTCACCAGCGCTTCTCTCGGCCGGCGACCAGATATCCAAGATAGCTTTTGGT ATCGCTTTACCCGTCATTTTTATTTCTGGCTCCATCAACACTACCATTCTCGGTCGATATTTTCATGGACGCATC TTCGAAAAGAACTCGCCCGACTACTACGTCAAGACGCCCAAGGGCTGGGCTGTCTGGTTAATCATTGTTACTTGT ATCTCCTTTGCAGCCTTTCTCATTGCCGAGCTCATTCCCTTTTTCAACCCTTTGCTTTCTCTGCTTTCTTCGCTC TTTGTTTCTGGCTTTTGCTTCTACTTGCCAGCCATTATGTGGTATCGACTGCTGCGCCACGGCAGCTGGTATGCC AGAAAAAACATTGCAAACAGTCTCATGAGTCTCCTTTCTTTTCTTGTTGGTGTCATTGTCCTCGTATGTGGAACT TATGCAAGCGTGGCCAATATTATACAATTGTTTCAAGAAGGCGACATTGGCGAGGTTTTTACCTGCAAGCCTGTT GGATAA
Gene	>OphauG2\|5574 ATGGCTTTGTCTCCCACTAAATCCACAAATGCCGACTTCTCTCAAGACACCACCTGCTCTCTTGCAGACCACCCA CTCTCTCAAGACGGCCTTTCTGAAAAACCCTCTCACCACCAAACCCCTCGCGTCGGCCAAGTCTGCGAGATAACC CTCGAAAAGCAACAAGACACCACACATCGCCTTGGCTGGATACGTCTGACCTTTGCCCTCGTCGTCGAGAGCGTT GCCCTCGGCAGCCTCAGTCTTCCCGCCGCCTTTGCTACCCTTGGAATGGTGGCCAGCGTTATTTGCTGCATTGGC CTAGGCCTCGTCGCCATCTACACTGGCTTTCTCGTCGGCAAAGTCAAGCTACGATATCCACACGTTGCCCACTAT GCTGACAGCGGCCGCTTGCTCATGGGTAACTTTGGCTACGAGCTCTTTGGCGCCATGTTTTCCCTCTCAATCGTC TTTGTCATTGCCTCTCATGTCCTTACCGGCACCATTGCCTTTGTTAATATTACAAACAGTGGCCTATGCTCGGCC ATCTTCGGCTTCATATCAACCCTCCTTCTTCTCATTCTCGCTATTCCGCCCTCCTTTGCAGACATAGCTATTCTA GGCTATATTGACTTTGTTTCCATCCTGGCTGCTATTGGCCTGACCATGATTGCCACTGGCATTCAGGCCAGTAAA GCCTCTGGTCTTTCGGCTAGCAACTGGTCTGCTTGGCCAAAACCGGGCATTACCTTTATCGACGCCTTTGTTGCT ATTGCTAATATTATATTTGCTTATACTTTTTGCGTCGGCCAGTTTTCATTCATGGATGAAATGCACACACCCAGA GACTTTATGAAATCTATATGGCTGCTCGGCGTCCTCGAGATTTCAATCTACACCCTCACCGGCGCTATTATATAC TCCTTTGTCGGTGTTGACGTCAAGTCACCAGCGCTTCTCTCGGCCGGCGACCAGATATCCAAGATAGCTTTTGGT ATCGCTTTACCCGTCATTTTTATTTCTGGCTCCATCAACACTACCATTCTCGGTCGATATTTTCATGGACGCATC TTCGAAAAGAACTCGCCCGACTACTACGTCAAGACGCCCAAGGGCTGGGCTGTCTGGTTAATCATTGTTACTTGT ATCTCCTTTGCAGCCTTTCTCATTGCCGAGCTCATTCCCTTTTTCAACCCTTTGCTTTCTCTGCTTTCTTCGCTC TTTGTTTCTGGCTTTTGCTTCTACTTGCCAGCCATTATGTGGTATCGACTGCTGCGCCACGGCAGCTGGTATGCC AGAAAAAACATTGCAAACAGTCTCATGAGTCTCCTTTCTTTTCTTGTTGGTGTCATTGTCCTCGTATGTGGAACT TATGCAAGCGTGGCCAATATTGTGAGTCTTGGCGTTTTCCTCCTTGTTGAACTGACGTTGCTTCGTTGCGACGCT AACAAACTTTATACCCATAGATACAATTGTTTCAAGAAGGCGACATTGGCGAGGTTTTTACCTGCAAGCCTGTTG GATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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