© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauG2|5543 |
| Gene name | |
| Location | Contig_513:12179..13233 |
| Strand | - |
| Gene length (bp) | 1054 |
| Transcript length (bp) | 903 |
| Coding sequence length (bp) | 903 |
| Protein length (aa) | 301 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF10277 | Frag1 | Frag1/DRAM/Sfk1 family | 1.8E-43 | 9 | 222 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9Y7U1|SFK1_SCHPO | Protein sfk1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sfk1 PE=3 SV=1 | 11 | 225 | 6.0E-15 |
| sp|P35735|SFK1_YEAST | Protein SFK1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SFK1 PE=1 SV=1 | 11 | 230 | 2.0E-09 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 11 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 10 | 32 | 22 |
| 2 | 62 | 81 | 19 |
| 3 | 101 | 123 | 22 |
| 4 | 135 | 154 | 19 |
| 5 | 169 | 191 | 22 |
| 6 | 198 | 220 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauG2|5543 MAAHGFISYWLIPLFSSLVWLGMLLGMLLHWIIDTHRRHYPEMNPHASIAYISNIGAHKLKPLFIAGSVVTTLTL DASFVAERWLRHRGRLVPNASLGEKVLAILCIVFAVIGTVGLIILSIFDTWRHHRVHNIFLFFFIAGYIISAIFA CWEYQRLGIKNREYRILRASFWIKLAFIIVEIALAIAFAVCSWTNRRNLAAIFEWIVAFIFTLYILSYVLDLLPA AHTRHPATRFEKPGASQETADDGPYPYPSDYTSPAPSLTNEPAALAGHYPSASSPSARSPLPRREYPMDSNPPNF * |
| Coding | >OphauG2|5543 ATGGCCGCCCACGGCTTCATTTCGTACTGGCTCATCCCCCTCTTCTCCAGCCTCGTCTGGCTCGGCATGCTTCTC GGCATGCTTCTCCACTGGATCATCGACACCCACCGCCGCCACTACCCCGAGATGAACCCCCACGCCTCCATTGCC TACATCAGCAACATTGGCGCCCACAAACTCAAGCCCCTCTTCATTGCTGGCTCCGTCGTCACCACCCTGACCCTC GACGCCTCCTTCGTCGCAGAGCGCTGGCTGCGCCACCGTGGTCGCCTCGTCCCCAATGCGTCCCTCGGCGAAAAG GTGCTGGCCATTCTCTGCATTGTCTTTGCAGTCATTGGCACCGTTGGCCTCATTATTCTGTCCATTTTTGATACC TGGCGCCATCATCGCGTCCACAATATTTTTCTCTTCTTTTTTATTGCCGGTTACATTATATCTGCCATTTTTGCC TGCTGGGAGTATCAGCGCCTCGGCATCAAAAACCGCGAATACCGCATCCTCCGCGCCTCATTTTGGATCAAACTC GCCTTCATCATTGTGGAAATAGCCCTTGCCATTGCCTTTGCCGTCTGCTCGTGGACCAATCGCCGCAACCTTGCC GCCATCTTTGAGTGGATTGTCGCCTTCATCTTCACCCTCTACATCCTCTCCTACGTCCTCGATCTCTTGCCCGCT GCCCACACGCGTCATCCTGCCACCCGCTTCGAAAAACCAGGCGCCTCGCAGGAAACCGCTGACGATGGTCCCTAT CCTTATCCCTCTGACTATACCAGCCCTGCCCCCAGTCTTACCAACGAACCCGCTGCCCTTGCCGGACACTACCCT TCTGCGTCATCGCCCTCCGCCCGGAGTCCGCTGCCCCGACGAGAGTATCCCATGGACAGCAACCCCCCCAATTTT TGA |
| Transcript | >OphauG2|5543 ATGGCCGCCCACGGCTTCATTTCGTACTGGCTCATCCCCCTCTTCTCCAGCCTCGTCTGGCTCGGCATGCTTCTC GGCATGCTTCTCCACTGGATCATCGACACCCACCGCCGCCACTACCCCGAGATGAACCCCCACGCCTCCATTGCC TACATCAGCAACATTGGCGCCCACAAACTCAAGCCCCTCTTCATTGCTGGCTCCGTCGTCACCACCCTGACCCTC GACGCCTCCTTCGTCGCAGAGCGCTGGCTGCGCCACCGTGGTCGCCTCGTCCCCAATGCGTCCCTCGGCGAAAAG GTGCTGGCCATTCTCTGCATTGTCTTTGCAGTCATTGGCACCGTTGGCCTCATTATTCTGTCCATTTTTGATACC TGGCGCCATCATCGCGTCCACAATATTTTTCTCTTCTTTTTTATTGCCGGTTACATTATATCTGCCATTTTTGCC TGCTGGGAGTATCAGCGCCTCGGCATCAAAAACCGCGAATACCGCATCCTCCGCGCCTCATTTTGGATCAAACTC GCCTTCATCATTGTGGAAATAGCCCTTGCCATTGCCTTTGCCGTCTGCTCGTGGACCAATCGCCGCAACCTTGCC GCCATCTTTGAGTGGATTGTCGCCTTCATCTTCACCCTCTACATCCTCTCCTACGTCCTCGATCTCTTGCCCGCT GCCCACACGCGTCATCCTGCCACCCGCTTCGAAAAACCAGGCGCCTCGCAGGAAACCGCTGACGATGGTCCCTAT CCTTATCCCTCTGACTATACCAGCCCTGCCCCCAGTCTTACCAACGAACCCGCTGCCCTTGCCGGACACTACCCT TCTGCGTCATCGCCCTCCGCCCGGAGTCCGCTGCCCCGACGAGAGTATCCCATGGACAGCAACCCCCCCAATTTT TGA |
| Gene | >OphauG2|5543 ATGGCCGCCCACGGCTTCATTTCGTACTGGGTAACTCAATGCCCCATCCCTCAAAAACAAAACAAAAAACCTCTC AACTCACCGCCCTCGCCAGCTCATCCCCCTCTTCTCCAGCCTCGTCTGGCTCGGCATGCTTCTCGGCATGCTTCT CCACTGGATCATCGACACCCACCGCCGCCACTACCCCGAGATGAACCCCCACGCCTCCATTGCCTACATCAGCAA CATTGGCGCCCACAAACTCAAGCCCCTCTTCATTGCTGGCTCCGTCGTCACCACCCTGACCCTCGACGCCTCCTT CGTCGCAGAGCGCTGGCTGCGCCACCGTGGTCGCCTCGTCCCCAATGCGTCCCTCGGCGAAAAGGTGCTGGCCAT TCTCTGCATTGTCTTTGCAGTCATTGGCACCGTTGGCCTCATTATTCTGTCCATTTTTGATACCTGGCGCCATCA TCGCGTCCACAATATTTTTCTCTTCTTTTTTATTGCCGGTTACATTATATCTGCCATTTTTGCCTGCTGGGAGTA TCAGCGCCTCGGCATCAGTACGCCTACTCTCCAGCCTTGTCTCTTCTTTGATTCTTTATGCCCCCTTCTTCATAT CCATGCTTTCTAACACTTCTCGCCGCCAGAAAACCGCGAATACCGCATCCTCCGCGCCTCATTTTGGATCAAACT CGCCTTCATCATTGTGGAAATAGCCCTTGCCATTGCCTTTGCCGTCTGCTCGTGGACCAATCGCCGCAACCTTGC CGCCATCTTTGAGTGGATTGTCGCCTTCATCTTCACCCTCTACATCCTCTCCTACGTCCTCGATCTCTTGCCCGC TGCCCACACGCGTCATCCTGCCACCCGCTTCGAAAAACCAGGCGCCTCGCAGGAAACCGCTGACGATGGTCCCTA TCCTTATCCCTCTGACTATACCAGCCCTGCCCCCAGTCTTACCAACGAACCCGCTGCCCTTGCCGGACACTACCC TTCTGCGTCATCGCCCTCCGCCCGGAGTCCGCTGCCCCGACGAGAGTATCCCATGGACAGCAACCCCCCCAATTT TTGA |