Fungal Genomics

at Utrecht University

General Properties

Protein ID	OphauG2\|5533
Gene name
Location	Contig_511:8820..10242
Strand	-
Gene length (bp)	1422
Transcript length (bp)	1422
Coding sequence length (bp)	1422
Protein length (aa)	474

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF01266	DAO	FAD dependent oxidoreductase	8.5E-42	8	401

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|O43029\|FAP1_SCHPO	L-pipecolate oxidase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=fap1 PE=1 SV=1	7	421	3.0E-57
sp\|Q9UTM9\|FAP2_SCHPO	L-saccharopine oxidase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=fap2 PE=1 SV=1	7	424	6.0E-35
sp\|P40873\|MSOX_ARTST	Monomeric sarcosine oxidase OS=Arthrobacter sp. (strain TE1826) GN=soxA PE=1 SV=2	8	401	6.0E-15
sp\|P23342\|MSOX_BACSN	Monomeric sarcosine oxidase OS=Bacillus sp. (strain NS-129) GN=soxA PE=1 SV=1	4	401	3.0E-14
sp\|P40859\|MSOX_BACB0	Monomeric sarcosine oxidase OS=Bacillus sp. (strain B-0618) GN=soxA PE=1 SV=2	4	399	2.0E-13

GO

GO Term	Description	Terminal node
GO:0016491	oxidoreductase activity	Yes
GO:0003674	molecular_function	No
GO:0003824	catalytic activity	No

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 24	0.5

Transmembrane Domains

Domain #	Start	End	Length
1	5	24	19

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>OphauG2\|5533 MEQTPLSILIVGSGVFGLSTAWALTKRARFSMTAITVVDDARGQFPPADAASVDASRIVRADYADAQYTALASLA QREWRKNGDDDFGGQGRYAEPGLVLMAYQQDGNKSSMTYVEESWRNVAEHAAQNGYTEDTVQLLESREALKQSLG ISKHAGDWGYLNKLSGWADAAKAMDWLYKRVEATGRVRFVDAKVQQLETKGERVVGARLANGNVILADLVVVAAG AWSGSLVDLRGRVEATGHLLSYVDIDEQELEVLSKQPMVLQLSRGLFIIPPRERVLKVGFHGYGYVNPRSIATAL PLSPTAARVPIVASCPLTSRDGKLERMPDQDDAAMRSALRDLLPVSAMQDRPWREVRICWYADTTDGNWLVDWHP GWKGLFLATGDSGHAFKFLPVLGDKVVGCMLREGGELGNLWRWKDDARGEAVAVATQSHGQYCRLVASKDGSRGG EQPESFLGEALRALSDKPPRPWK*
Coding	>OphauG2\|5533 ATGGAGCAGACGCCTTTGTCCATTCTCATCGTCGGCTCAGGAGTGTTTGGACTCAGCACAGCATGGGCGCTGACG AAACGGGCTCGCTTCTCCATGACAGCCATCACAGTGGTGGATGATGCACGAGGCCAGTTCCCTCCTGCTGACGCA GCCAGTGTCGATGCGTCGCGCATTGTTCGAGCCGACTATGCAGATGCCCAGTACACGGCGTTGGCGTCGCTGGCG CAACGCGAATGGCGCAAGAATGGAGATGATGATTTTGGCGGTCAAGGGCGATACGCAGAACCAGGCTTGGTCCTC ATGGCGTACCAGCAAGACGGCAACAAGTCTTCCATGACGTACGTCGAGGAGAGCTGGAGGAACGTGGCCGAGCAT GCTGCGCAGAATGGTTACACGGAGGATACGGTGCAGCTGCTCGAGAGCCGGGAGGCACTGAAGCAGAGCTTGGGC ATCAGTAAGCACGCGGGAGATTGGGGATACTTGAACAAGCTGTCCGGGTGGGCCGACGCGGCAAAGGCCATGGAT TGGCTGTACAAACGGGTGGAGGCAACTGGCCGGGTGCGCTTCGTGGATGCCAAGGTACAACAGCTCGAGACCAAG GGGGAGCGAGTGGTGGGCGCCAGACTGGCCAACGGCAATGTCATTCTGGCCGACTTGGTGGTGGTGGCAGCGGGA GCCTGGTCGGGCTCTCTGGTCGATCTCAGAGGCCGCGTCGAGGCAACGGGACACCTTCTCAGCTACGTGGACATT GACGAGCAGGAGCTTGAGGTGCTTTCCAAGCAGCCCATGGTGCTGCAGCTGTCGCGGGGACTCTTCATCATCCCG CCACGGGAGCGAGTGCTCAAGGTTGGCTTTCATGGATACGGCTATGTCAATCCTCGATCGATTGCCACGGCACTG CCCCTCTCGCCGACGGCGGCGCGTGTGCCAATCGTGGCGTCATGCCCCCTGACGAGCCGAGACGGCAAGCTGGAG CGAATGCCGGACCAGGATGATGCGGCGATGCGGAGCGCGCTGCGAGATCTGCTGCCCGTGTCAGCCATGCAAGAC CGGCCGTGGCGCGAGGTGCGCATCTGCTGGTATGCCGACACGACTGACGGTAACTGGCTTGTTGACTGGCACCCA GGGTGGAAGGGGCTCTTCCTGGCAACGGGGGACAGCGGCCACGCCTTCAAGTTCCTGCCAGTGCTTGGAGACAAG GTGGTGGGCTGCATGTTGAGGGAGGGTGGAGAGCTGGGCAACTTGTGGCGGTGGAAGGACGACGCACGAGGCGAA GCCGTCGCCGTCGCCACACAAAGCCATGGCCAGTATTGCCGACTGGTGGCCAGCAAAGACGGGAGTCGTGGTGGA GAGCAGCCAGAGAGCTTCTTGGGCGAGGCTTTACGCGCTCTCTCGGACAAGCCGCCAAGGCCTTGGAAATGA
Transcript	>OphauG2\|5533 ATGGAGCAGACGCCTTTGTCCATTCTCATCGTCGGCTCAGGAGTGTTTGGACTCAGCACAGCATGGGCGCTGACG AAACGGGCTCGCTTCTCCATGACAGCCATCACAGTGGTGGATGATGCACGAGGCCAGTTCCCTCCTGCTGACGCA GCCAGTGTCGATGCGTCGCGCATTGTTCGAGCCGACTATGCAGATGCCCAGTACACGGCGTTGGCGTCGCTGGCG CAACGCGAATGGCGCAAGAATGGAGATGATGATTTTGGCGGTCAAGGGCGATACGCAGAACCAGGCTTGGTCCTC ATGGCGTACCAGCAAGACGGCAACAAGTCTTCCATGACGTACGTCGAGGAGAGCTGGAGGAACGTGGCCGAGCAT GCTGCGCAGAATGGTTACACGGAGGATACGGTGCAGCTGCTCGAGAGCCGGGAGGCACTGAAGCAGAGCTTGGGC ATCAGTAAGCACGCGGGAGATTGGGGATACTTGAACAAGCTGTCCGGGTGGGCCGACGCGGCAAAGGCCATGGAT TGGCTGTACAAACGGGTGGAGGCAACTGGCCGGGTGCGCTTCGTGGATGCCAAGGTACAACAGCTCGAGACCAAG GGGGAGCGAGTGGTGGGCGCCAGACTGGCCAACGGCAATGTCATTCTGGCCGACTTGGTGGTGGTGGCAGCGGGA GCCTGGTCGGGCTCTCTGGTCGATCTCAGAGGCCGCGTCGAGGCAACGGGACACCTTCTCAGCTACGTGGACATT GACGAGCAGGAGCTTGAGGTGCTTTCCAAGCAGCCCATGGTGCTGCAGCTGTCGCGGGGACTCTTCATCATCCCG CCACGGGAGCGAGTGCTCAAGGTTGGCTTTCATGGATACGGCTATGTCAATCCTCGATCGATTGCCACGGCACTG CCCCTCTCGCCGACGGCGGCGCGTGTGCCAATCGTGGCGTCATGCCCCCTGACGAGCCGAGACGGCAAGCTGGAG CGAATGCCGGACCAGGATGATGCGGCGATGCGGAGCGCGCTGCGAGATCTGCTGCCCGTGTCAGCCATGCAAGAC CGGCCGTGGCGCGAGGTGCGCATCTGCTGGTATGCCGACACGACTGACGGTAACTGGCTTGTTGACTGGCACCCA GGGTGGAAGGGGCTCTTCCTGGCAACGGGGGACAGCGGCCACGCCTTCAAGTTCCTGCCAGTGCTTGGAGACAAG GTGGTGGGCTGCATGTTGAGGGAGGGTGGAGAGCTGGGCAACTTGTGGCGGTGGAAGGACGACGCACGAGGCGAA GCCGTCGCCGTCGCCACACAAAGCCATGGCCAGTATTGCCGACTGGTGGCCAGCAAAGACGGGAGTCGTGGTGGA GAGCAGCCAGAGAGCTTCTTGGGCGAGGCTTTACGCGCTCTCTCGGACAAGCCGCCAAGGCCTTGGAAATGA
Gene	>OphauG2\|5533 ATGGAGCAGACGCCTTTGTCCATTCTCATCGTCGGCTCAGGAGTGTTTGGACTCAGCACAGCATGGGCGCTGACG AAACGGGCTCGCTTCTCCATGACAGCCATCACAGTGGTGGATGATGCACGAGGCCAGTTCCCTCCTGCTGACGCA GCCAGTGTCGATGCGTCGCGCATTGTTCGAGCCGACTATGCAGATGCCCAGTACACGGCGTTGGCGTCGCTGGCG CAACGCGAATGGCGCAAGAATGGAGATGATGATTTTGGCGGTCAAGGGCGATACGCAGAACCAGGCTTGGTCCTC ATGGCGTACCAGCAAGACGGCAACAAGTCTTCCATGACGTACGTCGAGGAGAGCTGGAGGAACGTGGCCGAGCAT GCTGCGCAGAATGGTTACACGGAGGATACGGTGCAGCTGCTCGAGAGCCGGGAGGCACTGAAGCAGAGCTTGGGC ATCAGTAAGCACGCGGGAGATTGGGGATACTTGAACAAGCTGTCCGGGTGGGCCGACGCGGCAAAGGCCATGGAT TGGCTGTACAAACGGGTGGAGGCAACTGGCCGGGTGCGCTTCGTGGATGCCAAGGTACAACAGCTCGAGACCAAG GGGGAGCGAGTGGTGGGCGCCAGACTGGCCAACGGCAATGTCATTCTGGCCGACTTGGTGGTGGTGGCAGCGGGA GCCTGGTCGGGCTCTCTGGTCGATCTCAGAGGCCGCGTCGAGGCAACGGGACACCTTCTCAGCTACGTGGACATT GACGAGCAGGAGCTTGAGGTGCTTTCCAAGCAGCCCATGGTGCTGCAGCTGTCGCGGGGACTCTTCATCATCCCG CCACGGGAGCGAGTGCTCAAGGTTGGCTTTCATGGATACGGCTATGTCAATCCTCGATCGATTGCCACGGCACTG CCCCTCTCGCCGACGGCGGCGCGTGTGCCAATCGTGGCGTCATGCCCCCTGACGAGCCGAGACGGCAAGCTGGAG CGAATGCCGGACCAGGATGATGCGGCGATGCGGAGCGCGCTGCGAGATCTGCTGCCCGTGTCAGCCATGCAAGAC CGGCCGTGGCGCGAGGTGCGCATCTGCTGGTATGCCGACACGACTGACGGTAACTGGCTTGTTGACTGGCACCCA GGGTGGAAGGGGCTCTTCCTGGCAACGGGGGACAGCGGCCACGCCTTCAAGTTCCTGCCAGTGCTTGGAGACAAG GTGGTGGGCTGCATGTTGAGGGAGGGTGGAGAGCTGGGCAACTTGTGGCGGTGGAAGGACGACGCACGAGGCGAA GCCGTCGCCGTCGCCACACAAAGCCATGGCCAGTATTGCCGACTGGTGGCCAGCAAAGACGGGAGTCGTGGTGGA GAGCAGCCAGAGAGCTTCTTGGGCGAGGCTTTACGCGCTCTCTCGGACAAGCCGCCAAGGCCTTGGAAATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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