Protein ID | OphauG2|5519 |
Gene name | |
Location | Contig_51:31631..33764 |
Strand | - |
Gene length (bp) | 2133 |
Transcript length (bp) | 2004 |
Coding sequence length (bp) | 2004 |
Protein length (aa) | 668 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF01363 | FYVE | FYVE zinc finger | 9.7E-07 | 175 | 244 |
PF01363 | FYVE | FYVE zinc finger | 7.8E-17 | 329 | 413 |
PF11464 | Rbsn | Rabenosyn Rab binding domain | 2.9E-15 | 605 | 646 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|P32609|PEP7_YEAST | Vacuolar segregation protein PEP7 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PEP7 PE=1 SV=2 | 121 | 650 | 7.0E-62 |
sp|O13786|PEP7_SCHPO | Vacuolar segregation protein pep7 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pep7 PE=3 SV=1 | 74 | 654 | 1.0E-52 |
sp|Q9H1K0|RBNS5_HUMAN | Rabenosyn-5 OS=Homo sapiens GN=RBSN PE=1 SV=2 | 253 | 539 | 4.0E-12 |
sp|Q80Y56|RBNS5_MOUSE | Rabenosyn-5 OS=Mus musculus GN=Rbsn PE=1 SV=1 | 253 | 539 | 5.0E-09 |
GO Term | Description | Terminal node |
---|---|---|
GO:0046872 | metal ion binding | Yes |
GO:0003674 | molecular_function | No |
GO:0043169 | cation binding | No |
GO:0005488 | binding | No |
GO:0043167 | ion binding | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 11 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >OphauG2|5519 MSGRRLGGGRILGSGKGLAPPIATPSAAPRARSPFAPSDSSLSLGSHSLSPPVSISLTDPGPDIGSSVSLGTQAK GTVAPSTDLVTLLQLNRHIDDNHQELPEHEQNEVNTWFDKQVLKAKRFQPLSLINQKLRGLDVFESNESSIPSSI PHAAASSTSRADSFADPDDFITRSHWQRGTNSDRCTDPTCGKSLGSINGSINCRKCGKLFCEEHTMYQMKLSRSA NHEPVRGYWSRVCETCYKSREGYNDHTGVSVDHTAMFAEMRRKRVERQKLEVSRLEKRLTKLTSLLADAPTTLAA SNGGSLLAPVSSLMGQKDGRKLLEQSVVTWEEDEAVSKCPFCQQEFGSWTFRRHHCRICGHVVCADPLTACSSEV SLNIKSPSSPRTEKALTNGESDQLHANIRMCRDCNHTIFSARDFAASLLYKPPDQRAYETLCQFERGIRLLLPSF HRVLMALQPSKLSNGETDLSKPPPTHAQIQEAAKIRKRLIDSFGKYGAAAKRMRNLQTDKPSQKRLQEAVYTYAS GFLHTNMLPLKSLPQMLRACSTASPIGRYMSTPTHSASNLRHTELATSSDVDSQAPSDEASTVVSQLESEEKELK ERLAVLQEQKFLVQDMMRMATGARRFEEASALSRNIKELETEIDELSARVDQVEQRWEGVYGNGKPA* |
Coding | >OphauG2|5519 ATGTCTGGCCGGAGGCTCGGGGGCGGCCGCATCCTGGGCAGCGGCAAAGGCCTGGCGCCGCCCATAGCGACTCCG TCGGCCGCCCCCCGAGCTCGCAGCCCCTTTGCTCCTTCGGATAGCTCCCTTTCCCTCGGCTCCCACTCTCTTTCG CCGCCTGTCAGCATCAGCCTCACCGACCCGGGTCCGGACATTGGCTCCAGCGTCAGTCTGGGCACTCAGGCCAAG GGCACCGTTGCCCCGTCGACGGACCTCGTGACGCTGTTGCAGCTCAATCGCCACATTGACGACAATCACCAGGAG CTCCCTGAGCATGAGCAGAACGAAGTCAACACATGGTTCGACAAGCAAGTCCTCAAGGCCAAGCGTTTCCAGCCC CTGTCGCTCATCAACCAGAAGCTTCGGGGACTAGACGTGTTCGAGTCCAACGAGTCCAGTATTCCTTCATCCATC CCTCACGCCGCCGCGAGCAGCACATCACGCGCCGACAGTTTCGCCGACCCCGATGACTTCATCACAAGGAGCCAT TGGCAGCGAGGCACCAACTCGGATCGATGCACAGATCCCACCTGTGGCAAGAGCCTGGGCTCCATCAATGGGAGC ATAAACTGTCGAAAGTGCGGCAAGCTATTCTGCGAGGAGCACACCATGTATCAAATGAAGCTCAGTAGAAGCGCC AACCACGAGCCTGTCAGGGGCTACTGGTCCCGCGTCTGCGAGACTTGCTACAAATCCAGAGAGGGCTATAATGAC CACACTGGCGTCTCTGTCGACCACACAGCCATGTTTGCCGAGATGAGACGAAAGAGGGTAGAGCGACAGAAGCTG GAAGTATCACGACTGGAAAAGCGCTTGACCAAGCTGACCAGTCTTTTGGCTGACGCTCCAACAACCTTGGCGGCC TCAAACGGGGGCTCCTTATTGGCGCCCGTCTCGTCCTTGATGGGACAGAAAGATGGCCGTAAACTACTTGAGCAA TCCGTCGTGACGTGGGAGGAGGATGAGGCCGTATCAAAGTGTCCCTTTTGCCAGCAAGAGTTTGGTTCCTGGACA TTTCGGCGCCACCATTGCCGTATATGCGGCCACGTCGTGTGCGCAGACCCCTTGACAGCCTGCTCGTCTGAAGTC AGCCTGAACATCAAGAGCCCCTCAAGTCCCAGGACCGAAAAGGCCTTGACCAACGGAGAGAGCGACCAACTGCAC GCCAATATCAGGATGTGTAGGGATTGCAATCATACAATCTTCTCGGCCCGAGACTTTGCCGCCTCGCTGCTTTAC AAGCCTCCGGATCAGCGAGCGTACGAGACTCTGTGCCAATTTGAGCGCGGCATTCGTCTGCTGCTGCCTTCCTTC CACCGCGTTCTCATGGCTTTACAACCCAGCAAATTGAGCAATGGAGAAACAGATTTGAGCAAGCCTCCCCCGACC CACGCGCAGATTCAAGAAGCAGCCAAGATACGGAAACGCCTGATTGACAGCTTTGGCAAATACGGCGCTGCGGCA AAGAGGATGCGCAATCTCCAGACGGACAAGCCGTCTCAGAAACGACTACAAGAAGCCGTCTACACCTATGCCAGC GGCTTTTTGCACACAAACATGCTGCCGCTAAAGAGCTTGCCGCAGATGCTGCGCGCATGCTCTACGGCTTCTCCC ATTGGCCGCTACATGTCCACGCCCACTCACTCGGCCTCGAATCTGCGGCACACGGAGCTTGCCACCTCGTCCGAC GTGGACTCGCAGGCACCCAGTGACGAAGCCAGCACTGTTGTCAGTCAGCTTGAATCGGAGGAGAAGGAGCTCAAG GAGCGGCTGGCGGTGCTCCAGGAGCAAAAGTTTCTGGTGCAAGACATGATGCGCATGGCTACGGGCGCGCGTCGC TTCGAAGAGGCGAGTGCCTTGTCGCGCAATATCAAGGAGCTCGAGACCGAGATTGATGAGCTAAGCGCAAGGGTT GACCAGGTTGAGCAGAGGTGGGAGGGCGTCTATGGTAATGGCAAACCTGCTTGA |
Transcript | >OphauG2|5519 ATGTCTGGCCGGAGGCTCGGGGGCGGCCGCATCCTGGGCAGCGGCAAAGGCCTGGCGCCGCCCATAGCGACTCCG TCGGCCGCCCCCCGAGCTCGCAGCCCCTTTGCTCCTTCGGATAGCTCCCTTTCCCTCGGCTCCCACTCTCTTTCG CCGCCTGTCAGCATCAGCCTCACCGACCCGGGTCCGGACATTGGCTCCAGCGTCAGTCTGGGCACTCAGGCCAAG GGCACCGTTGCCCCGTCGACGGACCTCGTGACGCTGTTGCAGCTCAATCGCCACATTGACGACAATCACCAGGAG CTCCCTGAGCATGAGCAGAACGAAGTCAACACATGGTTCGACAAGCAAGTCCTCAAGGCCAAGCGTTTCCAGCCC CTGTCGCTCATCAACCAGAAGCTTCGGGGACTAGACGTGTTCGAGTCCAACGAGTCCAGTATTCCTTCATCCATC CCTCACGCCGCCGCGAGCAGCACATCACGCGCCGACAGTTTCGCCGACCCCGATGACTTCATCACAAGGAGCCAT TGGCAGCGAGGCACCAACTCGGATCGATGCACAGATCCCACCTGTGGCAAGAGCCTGGGCTCCATCAATGGGAGC ATAAACTGTCGAAAGTGCGGCAAGCTATTCTGCGAGGAGCACACCATGTATCAAATGAAGCTCAGTAGAAGCGCC AACCACGAGCCTGTCAGGGGCTACTGGTCCCGCGTCTGCGAGACTTGCTACAAATCCAGAGAGGGCTATAATGAC CACACTGGCGTCTCTGTCGACCACACAGCCATGTTTGCCGAGATGAGACGAAAGAGGGTAGAGCGACAGAAGCTG GAAGTATCACGACTGGAAAAGCGCTTGACCAAGCTGACCAGTCTTTTGGCTGACGCTCCAACAACCTTGGCGGCC TCAAACGGGGGCTCCTTATTGGCGCCCGTCTCGTCCTTGATGGGACAGAAAGATGGCCGTAAACTACTTGAGCAA TCCGTCGTGACGTGGGAGGAGGATGAGGCCGTATCAAAGTGTCCCTTTTGCCAGCAAGAGTTTGGTTCCTGGACA TTTCGGCGCCACCATTGCCGTATATGCGGCCACGTCGTGTGCGCAGACCCCTTGACAGCCTGCTCGTCTGAAGTC AGCCTGAACATCAAGAGCCCCTCAAGTCCCAGGACCGAAAAGGCCTTGACCAACGGAGAGAGCGACCAACTGCAC GCCAATATCAGGATGTGTAGGGATTGCAATCATACAATCTTCTCGGCCCGAGACTTTGCCGCCTCGCTGCTTTAC AAGCCTCCGGATCAGCGAGCGTACGAGACTCTGTGCCAATTTGAGCGCGGCATTCGTCTGCTGCTGCCTTCCTTC CACCGCGTTCTCATGGCTTTACAACCCAGCAAATTGAGCAATGGAGAAACAGATTTGAGCAAGCCTCCCCCGACC CACGCGCAGATTCAAGAAGCAGCCAAGATACGGAAACGCCTGATTGACAGCTTTGGCAAATACGGCGCTGCGGCA AAGAGGATGCGCAATCTCCAGACGGACAAGCCGTCTCAGAAACGACTACAAGAAGCCGTCTACACCTATGCCAGC GGCTTTTTGCACACAAACATGCTGCCGCTAAAGAGCTTGCCGCAGATGCTGCGCGCATGCTCTACGGCTTCTCCC ATTGGCCGCTACATGTCCACGCCCACTCACTCGGCCTCGAATCTGCGGCACACGGAGCTTGCCACCTCGTCCGAC GTGGACTCGCAGGCACCCAGTGACGAAGCCAGCACTGTTGTCAGTCAGCTTGAATCGGAGGAGAAGGAGCTCAAG GAGCGGCTGGCGGTGCTCCAGGAGCAAAAGTTTCTGGTGCAAGACATGATGCGCATGGCTACGGGCGCGCGTCGC TTCGAAGAGGCGAGTGCCTTGTCGCGCAATATCAAGGAGCTCGAGACCGAGATTGATGAGCTAAGCGCAAGGGTT GACCAGGTTGAGCAGAGGTGGGAGGGCGTCTATGGTAATGGCAAACCTGCTTGA |
Gene | >OphauG2|5519 ATGTCTGGCCGGAGGCTCGGGGGCGGCCGCATCCTGGGCAGCGGCAAAGGCCTGGCGCCGCCCATAGCGACTCCG TCGGCCGCCCCCCGAGCTCGCAGCCCCTTTGCTCCTTCGGATAGCTCCCTTTCCCTCGGCTCCCACTCTCTTTCG CCGCCTGTCAGCATCAGCCTCACCGACCCGGGTCCGGACATTGGCTCCAGCGTCAGTCTGGGCACTCAGGCCAAG GGCACCGTTGCCCCGTCGACGGACCTCGTCTGTCCCATTTGCAATGAGGAAATGGCATGTGTGTCTTGCTTGCAT GGCTCGGACCTGGTGCTGACCTGATGCTCACAGGTGACGCTGTTGCAGCTCAATCGCCACATTGACGACAATCAC CAGGAGCTCCCTGAGCATGAGCAGAACGAAGTCAACACATGGTTCGACAAGCAAGTCCTCAAGGCCAAGCGTTTC CAGCCCCTGTCGCTCATCAACCAGAAGCTTCGGGGACTAGACGTGTTCGAGTCCAACGAGTCCAGTATTCCTTCA TCCATCCCTCACGCCGCCGCGAGCAGCACATCACGCGCCGACAGTTTCGCCGACCCCGATGACTTCATCACAAGG AGCCATTGGCAGCGAGGCACCAACTCGGATCGATGCACAGATCCCACCTGTGGCAAGAGCCTGGGCTCCATCAAT GGGAGCATAAACTGTCGAAAGTGCGGCAAGCTATTCTGCGAGGAGCACACCATGTATCAAATGAAGCTCAGTAGA AGCGCCAACCACGAGCCTGTCAGGGGCTACTGGTCCCGCGTCTGCGAGACTTGCTACAAATCCAGAGAGGGCTAT AATGACCACACTGGCGTCTCTGTCGACCACACAGCCATGTTTGCCGAGATGAGACGAAAGAGGGTAGAGCGACAG AAGCTGGAAGTATCACGACTGGAAAAGCGCTTGACCAAGCTGACCAGTCTTTTGGCTGACGCTCCAACAACCTTG GCGGCCTCAAACGGGGGCTCCTTATTGGCGCCCGTCTCGTCCTTGATGGGACAGAAAGATGGCCGTAAACTACTT GAGCAATCCGTCGTGACGTGGGAGGAGGATGAGGCCGTATCAAAGTGTCCCTTTTGCCAGCAAGAGTTTGGTTCC TGGACATTTCGGCGCCACCATTGCCGTATATGCGGCCACGTCGTGTGCGCAGACCCCTTGACAGCCTGCTCGTCT GAAGTCAGCCTGAACATCAAGAGCCGTAAGTTGACTTTGCTGCGTTTGTCGAGACAGCACTAACTCGTCCCAGCC TCAAGTCCCAGGACCGAAAAGGCCTTGACCAACGGAGAGAGCGACCAACTGCACGCCAATATCAGGATGTGTAGG GATTGCAATCATACAATCTTCTCGGCCCGAGACTTTGCCGCCTCGCTGCTTTACAAGCCTCCGGATCAGCGAGCG TACGAGACTCTGTGCCAATTTGAGCGCGGCATTCGTCTGCTGCTGCCTTCCTTCCACCGCGTTCTCATGGCTTTA CAACCCAGCAAATTGAGCAATGGAGAAACAGATTTGAGCAAGCCTCCCCCGACCCACGCGCAGATTCAAGAAGCA GCCAAGATACGGAAACGCCTGATTGACAGCTTTGGCAAATACGGCGCTGCGGCAAAGAGGATGCGCAATCTCCAG ACGGACAAGCCGTCTCAGAAACGACTACAAGAAGCCGTCTACACCTATGCCAGCGGCTTTTTGCACACAAACATG CTGCCGCTAAAGAGCTTGCCGCAGATGCTGCGCGCATGCTCTACGGCTTCTCCCATTGGCCGCTACATGTCCACG CCCACTCACTCGGCCTCGAATCTGCGGCACACGGAGCTTGCCACCTCGTCCGACGTGGACTCGCAGGCACCCAGT GACGAAGCCAGCACTGTTGTCAGTCAGCTTGAATCGGAGGAGAAGGAGCTCAAGGAGCGGCTGGCGGTGCTCCAG GAGCAAAAGTTTCTGGTGCAAGACATGATGCGCATGGCTACGGGCGCGCGTCGCTTCGAAGAGGCGAGTGCCTTG TCGCGCAATATCAAGGAGCTCGAGACCGAGATTGATGAGCTAAGCGCAAGGGTTGACCAGGTTGAGCAGAGGTGG GAGGGCGTCTATGGTAATGGCAAACCTGCTTGA |