Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauG2|5486
Gene name
LocationContig_505:13010..13939
Strand+
Gene length (bp)929
Transcript length (bp)675
Coding sequence length (bp)675
Protein length (aa) 225

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00026 Asp Eukaryotic aspartyl protease 1.8E-13 118 222

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|Q4LAL9|CATD_CANLF Cathepsin D OS=Canis lupus familiaris GN=CTSD PE=2 SV=1 83 201 4.0E-08
sp|P07339|CATD_HUMAN Cathepsin D OS=Homo sapiens GN=CTSD PE=1 SV=1 83 201 1.0E-07
sp|P80209|CATD_BOVIN Cathepsin D OS=Bos taurus GN=CTSD PE=1 SV=2 104 201 2.0E-07
sp|D4AIS3|OPSB_ARTBC Probable aspartic-type endopeptidase OPSB OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=OPSB PE=3 SV=1 84 216 3.0E-07
sp|D4DFT3|OPSB_TRIVH Probable aspartic-type endopeptidase OPSB OS=Trichophyton verrucosum (strain HKI 0517) GN=OPSB PE=3 SV=1 118 216 3.0E-07
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|Q4LAL9|CATD_CANLF Cathepsin D OS=Canis lupus familiaris GN=CTSD PE=2 SV=1 83 201 4.0E-08
sp|P07339|CATD_HUMAN Cathepsin D OS=Homo sapiens GN=CTSD PE=1 SV=1 83 201 1.0E-07
sp|P80209|CATD_BOVIN Cathepsin D OS=Bos taurus GN=CTSD PE=1 SV=2 104 201 2.0E-07
sp|D4AIS3|OPSB_ARTBC Probable aspartic-type endopeptidase OPSB OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=OPSB PE=3 SV=1 84 216 3.0E-07
sp|D4DFT3|OPSB_TRIVH Probable aspartic-type endopeptidase OPSB OS=Trichophyton verrucosum (strain HKI 0517) GN=OPSB PE=3 SV=1 118 216 3.0E-07
sp|Q9MZS8|CATD_SHEEP Cathepsin D (Fragment) OS=Ovis aries GN=CTSD PE=1 SV=1 104 201 4.0E-07
sp|Q05744|CATD_CHICK Cathepsin D OS=Gallus gallus GN=CTSD PE=1 SV=1 106 188 8.0E-07
sp|Q6DYE7|RENI_CANLF Renin OS=Canis lupus familiaris GN=REN PE=2 SV=1 103 202 3.0E-06
sp|P24268|CATD_RAT Cathepsin D OS=Rattus norvegicus GN=Ctsd PE=1 SV=1 101 201 3.0E-06
sp|O13340|CARP_PODAS Podosporapepsin OS=Podospora anserina GN=PAPA PE=2 SV=1 100 190 5.0E-06
sp|Q9D7R7|PEPC_MOUSE Gastricsin OS=Mus musculus GN=Pgc PE=2 SV=1 115 188 6.0E-06
sp|Q9XEC4|APA3_ARATH Aspartic proteinase A3 OS=Arabidopsis thaliana GN=APA3 PE=1 SV=1 95 188 8.0E-06
sp|C5FS55|CARP_ARTOC Vacuolar protease A OS=Arthroderma otae (strain ATCC MYA-4605 / CBS 113480) GN=PEP2 PE=3 SV=1 118 188 8.0E-06
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GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 20 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauG2|5486
MAPAATALLLALALSTVNARPPQMQHGPQLPGSSLAPEIATTFARSRSGPIGRQSVSRKGAVQGAAQDSSDAQTV
AAQETTGGPLSMQVVHGRAAPKLDKRTNGSSPEMLATRGDIAYYARLDIGTPPQKIYAQLDTGSFELWINPDCAK
VDATDRQFCHSVGHYTSSQSTTAFVSNNTNMLRYGIGAANITYVLDYVSLPGAGPAMTKQPMQFGVATATQDQT*
Coding >OphauG2|5486
ATGGCTCCTGCTGCCACAGCCTTGCTCTTGGCCCTCGCCTTGTCGACGGTAAACGCCCGTCCACCACAGATGCAG
CACGGGCCCCAGCTGCCTGGCTCCTCACTGGCTCCCGAAATCGCTACCACCTTCGCCAGGTCTCGCTCTGGGCCC
ATTGGCAGGCAGTCGGTGTCTCGGAAAGGTGCTGTTCAGGGCGCTGCCCAAGACTCAAGCGATGCGCAAACAGTT
GCAGCCCAGGAGACCACTGGTGGTCCCTTATCCATGCAAGTAGTCCACGGGCGAGCAGCGCCAAAGCTGGACAAG
AGAACAAACGGGTCATCGCCAGAAATGTTGGCTACCAGGGGCGACATTGCCTATTATGCCAGACTTGATATTGGC
ACGCCTCCACAGAAGATATACGCTCAACTCGACACGGGCTCCTTTGAGCTCTGGATCAACCCCGACTGCGCCAAG
GTGGACGCCACGGACCGGCAGTTCTGCCACAGCGTCGGCCACTACACGTCGTCCCAGTCCACGACGGCTTTTGTC
AGCAACAACACCAACATGCTGCGCTACGGCATTGGCGCGGCAAACATCACGTATGTGCTGGATTACGTGTCTCTG
CCTGGGGCAGGGCCTGCCATGACGAAGCAGCCCATGCAGTTTGGGGTTGCCACGGCGACGCAGGACCAAACCTGA
Transcript >OphauG2|5486
ATGGCTCCTGCTGCCACAGCCTTGCTCTTGGCCCTCGCCTTGTCGACGGTAAACGCCCGTCCACCACAGATGCAG
CACGGGCCCCAGCTGCCTGGCTCCTCACTGGCTCCCGAAATCGCTACCACCTTCGCCAGGTCTCGCTCTGGGCCC
ATTGGCAGGCAGTCGGTGTCTCGGAAAGGTGCTGTTCAGGGCGCTGCCCAAGACTCAAGCGATGCGCAAACAGTT
GCAGCCCAGGAGACCACTGGTGGTCCCTTATCCATGCAAGTAGTCCACGGGCGAGCAGCGCCAAAGCTGGACAAG
AGAACAAACGGGTCATCGCCAGAAATGTTGGCTACCAGGGGCGACATTGCCTATTATGCCAGACTTGATATTGGC
ACGCCTCCACAGAAGATATACGCTCAACTCGACACGGGCTCCTTTGAGCTCTGGATCAACCCCGACTGCGCCAAG
GTGGACGCCACGGACCGGCAGTTCTGCCACAGCGTCGGCCACTACACGTCGTCCCAGTCCACGACGGCTTTTGTC
AGCAACAACACCAACATGCTGCGCTACGGCATTGGCGCGGCAAACATCACGTATGTGCTGGATTACGTGTCTCTG
CCTGGGGCAGGGCCTGCCATGACGAAGCAGCCCATGCAGTTTGGGGTTGCCACGGCGACGCAGGACCAAACCTGA
Gene >OphauG2|5486
ATGGCTCCTGCTGCCACAGCCTTGCTCTTGGCCCTCGCCTTGTCGACGGTAAACGCCCGTCCACCACAGATGCAG
CACGGGCCCCAGCTGCCTGGCTCCTCACTGGCTCCCGAAATCGCTACCACCTTCGCCAGGTCTCGCTCTGGGCCC
ATTGGCAGGCAGTCGGTGTCTCGGAAAGGTGCTGTTCAGGGCGCTGCCCAAGACTCAAGCGATGCGCAAACAGTT
GCAGCCCAGGAGACCACTGGTGGTCCCTTATCCATGCAAGTAGTCCACGGGCGAGCAGCGCCAAAGCTGGACAAG
AGAACAAACGGGTCATCGCCAGAAATGTTGGCTACCAGGGGCGACATTGCCTATTATGCCAGACGTGCGTTCCAT
CAAGAGTCCCCTGCATGAAGACCAAGGAGAAGACCAAGGACGAGAGGAAGAGGGGGAGAGAGAAAAAGAGAGAAA
GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGGAGAGAGAAGAAAAAGACCAAAAAAAGAGAGCTAATAATCA
AATGCTGACAGTTGATATTGGCACGCCTCCACAGAAGATATACGCTCAACTCGACACGGGCTCCTTTGAGCTCTG
GATCAACCCCGACTGCGCCAAGGTGGACGCCACGGACCGGCAGTTCTGCCACAGCGTCGGCCACTACACGTCGTC
CCAGTCCACGACGGCTTTTGTCAGCAACAACACCAACATGCTGCGCTACGGCATTGGCGCGGCAAACATCACGTA
TGTGCTGGATTACGTGTCTCTGCCTGGGGCAGGGCCTGCCATGACGAAGCAGCCCATGCAGTTTGGGGTTGCCAC
GGCGACGCAGGACCAGTTTGCGGGAATCCTGGGCATTGGCTTTGGCCAAAACATGACGATTGGCTACAAAAACTT
CATCGACCACTTGCAGGCGCAGAACCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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