© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauG2|5465 |
| Gene name | |
| Location | Contig_502:5774..7208 |
| Strand | + |
| Gene length (bp) | 1434 |
| Transcript length (bp) | 1434 |
| Coding sequence length (bp) | 1434 |
| Protein length (aa) | 478 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00892 | EamA | EamA-like transporter family | 3.3E-08 | 108 | 244 |
| PF00892 | EamA | EamA-like transporter family | 2.4E-08 | 287 | 428 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q08980|YP264_YEAST | Probable transport protein YPL264C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YPL264C PE=1 SV=1 | 98 | 428 | 4.0E-56 |
| sp|Q04835|YM87_YEAST | Uncharacterized membrane protein YMR253C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YMR253C PE=1 SV=1 | 36 | 451 | 2.0E-55 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016020 | membrane | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0005575 | cellular_component | No |
| GO:0110165 | cellular anatomical entity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 20 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 110 | 132 | 22 |
| 2 | 142 | 161 | 19 |
| 3 | 173 | 195 | 22 |
| 4 | 200 | 222 | 22 |
| 5 | 235 | 254 | 19 |
| 6 | 286 | 308 | 22 |
| 7 | 315 | 337 | 22 |
| 8 | 357 | 379 | 22 |
| 9 | 403 | 425 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauG2|5465 MHQLQSLSISIAGPRPEFTSHIYHCSAQSPHHGSNHPSDPRVVANGSHVDKKPHTTTMELRYLSPSSPLTFPSFP CSFGPTIRSPWQEKTSLNPDETRALRRFWTRNKPAILVALAQLFAASMNLSARILELQGGGMHPVQVLLLRQLLT STCCFGYMWWNKVPGFPFGGSDVRWLLVTRGMTGFMGILGMWYSMMYLPLAEATILTFLAPGVAGLGCYLLLGQP FTRAEQVATLAALLGVILIAQPTAFFAGSEPSVSGISSNSQEQNGSLPDANHQTTSKERLMAVSVAMLGVIGAAG AFTALRAIGRRANPVVSVNLFAVICTVVCGGALMVAPTLDVDQPALRWVTPSSAKQWLLILALAALGFIMQYLLT AGLGADKSNRANAMVYTQMVFAVAFDRWVFGHVMELMSLLGCSLILGSAVSVVLAKRPATVQPPLKADDCESRVS LGGDAEGAPMLLAAGGNATSVGRDDSR* |
| Coding | >OphauG2|5465 ATGCATCAGCTACAATCTTTAAGCATCTCCATTGCCGGACCGCGGCCCGAGTTTACCTCGCATATCTATCATTGC AGCGCGCAAAGTCCTCACCATGGCTCAAATCACCCCTCAGACCCACGGGTCGTTGCCAATGGCTCTCACGTCGAC AAGAAGCCGCACACGACAACAATGGAGCTGCGATACCTGTCTCCAAGCTCGCCGTTGACCTTTCCGAGCTTTCCT TGTTCTTTTGGACCCACAATCCGTAGTCCTTGGCAAGAAAAGACGTCTCTGAACCCAGATGAAACTCGTGCGCTC AGACGATTCTGGACTAGAAACAAGCCTGCTATTCTTGTGGCCTTGGCTCAGCTCTTTGCTGCATCAATGAATCTG AGTGCTCGCATACTAGAGCTCCAAGGTGGAGGCATGCATCCTGTCCAGGTGCTGCTTCTCAGACAACTTCTGACA TCGACCTGCTGTTTCGGGTACATGTGGTGGAACAAGGTGCCTGGTTTCCCGTTTGGCGGCAGTGATGTGCGCTGG CTTCTGGTGACGCGAGGAATGACCGGCTTCATGGGCATCTTGGGCATGTGGTATTCCATGATGTATCTCCCACTA GCTGAAGCCACTATCCTTACCTTTTTGGCGCCTGGAGTTGCGGGCCTGGGCTGCTACCTCTTACTTGGCCAGCCA TTCACGCGGGCCGAACAAGTAGCAACTCTTGCGGCGCTGCTTGGTGTCATTCTCATTGCACAGCCTACGGCTTTC TTTGCCGGCTCAGAACCGTCAGTGAGTGGTATTAGCAGCAACAGTCAGGAGCAAAATGGTAGCCTTCCTGATGCC AATCATCAAACCACGTCCAAAGAACGGCTCATGGCTGTCAGTGTTGCCATGCTTGGAGTCATTGGAGCGGCTGGA GCCTTTACCGCGTTGCGAGCCATTGGCAGGCGCGCAAACCCCGTTGTCTCAGTCAACCTCTTTGCTGTGATTTGC ACGGTTGTGTGTGGCGGTGCTCTGATGGTCGCTCCGACTCTCGACGTTGACCAGCCGGCACTGCGCTGGGTGACA CCTTCATCAGCCAAGCAATGGCTGCTCATCCTGGCCCTCGCAGCGCTGGGTTTCATTATGCAGTATCTGTTGACT GCAGGCCTGGGAGCGGACAAGTCGAATCGGGCCAATGCCATGGTTTACACGCAAATGGTCTTCGCAGTCGCCTTT GACCGCTGGGTGTTTGGTCACGTCATGGAGCTCATGAGTCTACTGGGCTGCTCCTTGATCTTGGGAAGTGCTGTC AGTGTGGTCCTGGCCAAGAGACCTGCGACGGTCCAGCCACCACTCAAGGCAGACGATTGCGAGAGTCGGGTCTCA TTGGGCGGAGACGCAGAGGGGGCTCCGATGCTCCTTGCGGCTGGAGGCAATGCCACGAGTGTCGGCCGAGATGAC AGCCGTTGA |
| Transcript | >OphauG2|5465 ATGCATCAGCTACAATCTTTAAGCATCTCCATTGCCGGACCGCGGCCCGAGTTTACCTCGCATATCTATCATTGC AGCGCGCAAAGTCCTCACCATGGCTCAAATCACCCCTCAGACCCACGGGTCGTTGCCAATGGCTCTCACGTCGAC AAGAAGCCGCACACGACAACAATGGAGCTGCGATACCTGTCTCCAAGCTCGCCGTTGACCTTTCCGAGCTTTCCT TGTTCTTTTGGACCCACAATCCGTAGTCCTTGGCAAGAAAAGACGTCTCTGAACCCAGATGAAACTCGTGCGCTC AGACGATTCTGGACTAGAAACAAGCCTGCTATTCTTGTGGCCTTGGCTCAGCTCTTTGCTGCATCAATGAATCTG AGTGCTCGCATACTAGAGCTCCAAGGTGGAGGCATGCATCCTGTCCAGGTGCTGCTTCTCAGACAACTTCTGACA TCGACCTGCTGTTTCGGGTACATGTGGTGGAACAAGGTGCCTGGTTTCCCGTTTGGCGGCAGTGATGTGCGCTGG CTTCTGGTGACGCGAGGAATGACCGGCTTCATGGGCATCTTGGGCATGTGGTATTCCATGATGTATCTCCCACTA GCTGAAGCCACTATCCTTACCTTTTTGGCGCCTGGAGTTGCGGGCCTGGGCTGCTACCTCTTACTTGGCCAGCCA TTCACGCGGGCCGAACAAGTAGCAACTCTTGCGGCGCTGCTTGGTGTCATTCTCATTGCACAGCCTACGGCTTTC TTTGCCGGCTCAGAACCGTCAGTGAGTGGTATTAGCAGCAACAGTCAGGAGCAAAATGGTAGCCTTCCTGATGCC AATCATCAAACCACGTCCAAAGAACGGCTCATGGCTGTCAGTGTTGCCATGCTTGGAGTCATTGGAGCGGCTGGA GCCTTTACCGCGTTGCGAGCCATTGGCAGGCGCGCAAACCCCGTTGTCTCAGTCAACCTCTTTGCTGTGATTTGC ACGGTTGTGTGTGGCGGTGCTCTGATGGTCGCTCCGACTCTCGACGTTGACCAGCCGGCACTGCGCTGGGTGACA CCTTCATCAGCCAAGCAATGGCTGCTCATCCTGGCCCTCGCAGCGCTGGGTTTCATTATGCAGTATCTGTTGACT GCAGGCCTGGGAGCGGACAAGTCGAATCGGGCCAATGCCATGGTTTACACGCAAATGGTCTTCGCAGTCGCCTTT GACCGCTGGGTGTTTGGTCACGTCATGGAGCTCATGAGTCTACTGGGCTGCTCCTTGATCTTGGGAAGTGCTGTC AGTGTGGTCCTGGCCAAGAGACCTGCGACGGTCCAGCCACCACTCAAGGCAGACGATTGCGAGAGTCGGGTCTCA TTGGGCGGAGACGCAGAGGGGGCTCCGATGCTCCTTGCGGCTGGAGGCAATGCCACGAGTGTCGGCCGAGATGAC AGCCGTTGA |
| Gene | >OphauG2|5465 ATGCATCAGCTACAATCTTTAAGCATCTCCATTGCCGGACCGCGGCCCGAGTTTACCTCGCATATCTATCATTGC AGCGCGCAAAGTCCTCACCATGGCTCAAATCACCCCTCAGACCCACGGGTCGTTGCCAATGGCTCTCACGTCGAC AAGAAGCCGCACACGACAACAATGGAGCTGCGATACCTGTCTCCAAGCTCGCCGTTGACCTTTCCGAGCTTTCCT TGTTCTTTTGGACCCACAATCCGTAGTCCTTGGCAAGAAAAGACGTCTCTGAACCCAGATGAAACTCGTGCGCTC AGACGATTCTGGACTAGAAACAAGCCTGCTATTCTTGTGGCCTTGGCTCAGCTCTTTGCTGCATCAATGAATCTG AGTGCTCGCATACTAGAGCTCCAAGGTGGAGGCATGCATCCTGTCCAGGTGCTGCTTCTCAGACAACTTCTGACA TCGACCTGCTGTTTCGGGTACATGTGGTGGAACAAGGTGCCTGGTTTCCCGTTTGGCGGCAGTGATGTGCGCTGG CTTCTGGTGACGCGAGGAATGACCGGCTTCATGGGCATCTTGGGCATGTGGTATTCCATGATGTATCTCCCACTA GCTGAAGCCACTATCCTTACCTTTTTGGCGCCTGGAGTTGCGGGCCTGGGCTGCTACCTCTTACTTGGCCAGCCA TTCACGCGGGCCGAACAAGTAGCAACTCTTGCGGCGCTGCTTGGTGTCATTCTCATTGCACAGCCTACGGCTTTC TTTGCCGGCTCAGAACCGTCAGTGAGTGGTATTAGCAGCAACAGTCAGGAGCAAAATGGTAGCCTTCCTGATGCC AATCATCAAACCACGTCCAAAGAACGGCTCATGGCTGTCAGTGTTGCCATGCTTGGAGTCATTGGAGCGGCTGGA GCCTTTACCGCGTTGCGAGCCATTGGCAGGCGCGCAAACCCCGTTGTCTCAGTCAACCTCTTTGCTGTGATTTGC ACGGTTGTGTGTGGCGGTGCTCTGATGGTCGCTCCGACTCTCGACGTTGACCAGCCGGCACTGCGCTGGGTGACA CCTTCATCAGCCAAGCAATGGCTGCTCATCCTGGCCCTCGCAGCGCTGGGTTTCATTATGCAGTATCTGTTGACT GCAGGCCTGGGAGCGGACAAGTCGAATCGGGCCAATGCCATGGTTTACACGCAAATGGTCTTCGCAGTCGCCTTT GACCGCTGGGTGTTTGGTCACGTCATGGAGCTCATGAGTCTACTGGGCTGCTCCTTGATCTTGGGAAGTGCTGTC AGTGTGGTCCTGGCCAAGAGACCTGCGACGGTCCAGCCACCACTCAAGGCAGACGATTGCGAGAGTCGGGTCTCA TTGGGCGGAGACGCAGAGGGGGCTCCGATGCTCCTTGCGGCTGGAGGCAATGCCACGAGTGTCGGCCGAGATGAC AGCCGTTGA |