© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauG2|5440 |
| Gene name | |
| Location | Contig_5:66449..67546 |
| Strand | + |
| Gene length (bp) | 1097 |
| Transcript length (bp) | 921 |
| Coding sequence length (bp) | 921 |
| Protein length (aa) | 307 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF06687 | SUR7 | SUR7/PalI family | 3.9E-26 | 10 | 285 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O13729|PUN1_SCHPO | SUR7 family protein pun1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pun1 PE=3 SV=1 | 32 | 295 | 3.0E-11 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0005886 | plasma membrane | Yes |
| GO:0005575 | cellular_component | No |
| GO:0016020 | membrane | No |
| GO:0110165 | cellular anatomical entity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 17 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 7 | 29 | 22 |
| 2 | 189 | 211 | 22 |
| 3 | 218 | 240 | 22 |
| 4 | 269 | 291 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauG2|5440 MVPVTRLAILLPLVFALVSFVLTSIALFSGYHQGTLEDYDVVRLNTSGIGHDLFDGKKDSAKKDGDGKDGEKKDG ILGDIQQWWDDTKDGARDKLNDITGDAADKLLDKLGISQWYSLHIMDTCQGEFTPTFNVTNCTSSTPSNRFNLTA VLDHQVSVGPVKINLATLEWPQSLQDKIDLLNGALLGLFVVYVVAMGFCGLSMLASLATFFLPAKRGIVFGNLAL ASFAALACLIGSIITTIVGSKGVSEINERGERFGVKAARGSKFYIISWIATGLMLGAALFWFGQLLTGRKRTGVK SDKASA* |
| Coding | >OphauG2|5440 ATGGTGCCCGTTACGAGGCTCGCGATTTTGCTGCCGCTCGTCTTTGCCCTGGTTAGCTTCGTGCTGACTTCGATT GCCCTCTTTTCTGGCTATCACCAGGGGACTCTGGAGGACTATGACGTTGTTAGGCTAAACACGTCTGGAATCGGC CATGATCTCTTTGACGGCAAAAAGGACAGCGCCAAGAAAGACGGCGATGGAAAGGACGGTGAGAAAAAGGATGGC ATCCTCGGCGATATCCAGCAGTGGTGGGACGATACAAAGGACGGCGCGCGAGACAAGTTAAACGACATTACCGGC GACGCCGCCGACAAGCTGCTCGACAAACTCGGCATCTCGCAATGGTACTCGCTGCACATTATGGATACCTGCCAG GGCGAATTCACGCCCACATTCAACGTGACAAACTGCACCTCGTCGACGCCCTCGAACCGCTTCAACCTGACGGCC GTTCTCGACCATCAAGTCAGCGTTGGCCCCGTCAAGATTAACCTCGCGACGCTCGAATGGCCGCAAAGCCTCCAA GATAAAATCGATCTTCTCAACGGCGCCCTCCTCGGCCTTTTTGTCGTCTACGTTGTCGCCATGGGCTTCTGTGGT CTATCCATGCTCGCCAGCCTGGCTACCTTTTTTCTACCCGCCAAGCGAGGCATCGTCTTTGGCAATCTCGCTCTC GCTTCTTTCGCGGCGCTGGCCTGCCTCATTGGTAGTATAATCACCACGATTGTCGGGTCCAAAGGCGTCAGCGAA ATTAACGAGCGCGGCGAGCGGTTCGGCGTCAAGGCGGCGCGGGGGTCCAAGTTTTACATAATAAGCTGGATTGCT ACCGGCTTGATGCTTGGCGCCGCGCTCTTTTGGTTTGGCCAGTTGCTGACGGGGCGCAAACGGACGGGGGTTAAG AGTGACAAGGCAAGCGCCTAG |
| Transcript | >OphauG2|5440 ATGGTGCCCGTTACGAGGCTCGCGATTTTGCTGCCGCTCGTCTTTGCCCTGGTTAGCTTCGTGCTGACTTCGATT GCCCTCTTTTCTGGCTATCACCAGGGGACTCTGGAGGACTATGACGTTGTTAGGCTAAACACGTCTGGAATCGGC CATGATCTCTTTGACGGCAAAAAGGACAGCGCCAAGAAAGACGGCGATGGAAAGGACGGTGAGAAAAAGGATGGC ATCCTCGGCGATATCCAGCAGTGGTGGGACGATACAAAGGACGGCGCGCGAGACAAGTTAAACGACATTACCGGC GACGCCGCCGACAAGCTGCTCGACAAACTCGGCATCTCGCAATGGTACTCGCTGCACATTATGGATACCTGCCAG GGCGAATTCACGCCCACATTCAACGTGACAAACTGCACCTCGTCGACGCCCTCGAACCGCTTCAACCTGACGGCC GTTCTCGACCATCAAGTCAGCGTTGGCCCCGTCAAGATTAACCTCGCGACGCTCGAATGGCCGCAAAGCCTCCAA GATAAAATCGATCTTCTCAACGGCGCCCTCCTCGGCCTTTTTGTCGTCTACGTTGTCGCCATGGGCTTCTGTGGT CTATCCATGCTCGCCAGCCTGGCTACCTTTTTTCTACCCGCCAAGCGAGGCATCGTCTTTGGCAATCTCGCTCTC GCTTCTTTCGCGGCGCTGGCCTGCCTCATTGGTAGTATAATCACCACGATTGTCGGGTCCAAAGGCGTCAGCGAA ATTAACGAGCGCGGCGAGCGGTTCGGCGTCAAGGCGGCGCGGGGGTCCAAGTTTTACATAATAAGCTGGATTGCT ACCGGCTTGATGCTTGGCGCCGCGCTCTTTTGGTTTGGCCAGTTGCTGACGGGGCGCAAACGGACGGGGGTTAAG AGTGACAAGGCAAGCGCCTAG |
| Gene | >OphauG2|5440 ATGGTGCCCGTTACGAGGCTCGCGATTTTGCTGCCGCTCGTCTTTGCCCTGGTTAGCTTCGTGCTGACTTCGATT GCCCTCTTTTCTGGCTATCACCAGGGGACTCTGGAGGACTATGACGTTGTTAGGGTGAGGTGTCTTGCTACTCTT GTGTTTTGAGATCAAGACTGGATTTACCACGGCGACTACTTTTCTTTTTGCTATTGCTAACAACAGGTAGCTAAA CACGTCTGGAATCGGCCATGATCTCTTTGACGGCAAAAAGGACAGCGCCAAGAAAGACGGCGATGGAAAGGACGG TGAGAAAAAGGATGGCATCCTCGGCGATATCCAGCAGTGGTGGGACGATACAAAGGACGGCGCGCGAGACAAGTT AAACGACATTACCGGCGACGCCGCCGACAAGCTGCTCGACAAACTCGGCATCTCGCAATGGTACTCGCTGCACAT TATGGATACCTGCCAGGGCGAATTCACGCCCACATTCAACGTGACAAACTGCACCTCGTCGACGCCCTCGAGTAC GTGCCAAGCTGGGCAGTCAATGCTCGTATCCCAAAACAACATGCCGACGCTTTGGCTGACACTTTTGTTCTCCCT CTCCAGACCGCTTCAACCTGACGGCCGTTCTCGACCATCAAGTCAGCGTTGGCCCCGTCAAGATTAACCTCGCGA CGCTCGAATGGCCGCAAAGCCTCCAAGATAAAATCGATCTTCTCAACGGCGCCCTCCTCGGCCTTTTTGTCGTCT ACGTTGTCGCCATGGGCTTCTGTGGTCTATCCATGCTCGCCAGCCTGGCTACCTTTTTTCTACCCGCCAAGCGAG GCATCGTCTTTGGCAATCTCGCTCTCGCTTCTTTCGCGGCGCTGGCCTGCCTCATTGGTAGTATAATCACCACGA TTGTCGGGTCCAAAGGCGTCAGCGAAATTAACGAGCGCGGCGAGCGGTTCGGCGTCAAGGCGGCGCGGGGGTCCA AGTTTTACATAATAAGCTGGATTGCTACCGGCTTGATGCTTGGCGCCGCGCTCTTTTGGTTTGGCCAGTTGCTGA CGGGGCGCAAACGGACGGGGGTTAAGAGTGACAAGGCAAGCGCCTAG |