Protein ID | OphauG2|5432 |
Gene name | |
Location | Contig_5:49722..50115 |
Strand | + |
Gene length (bp) | 393 |
Transcript length (bp) | 393 |
Coding sequence length (bp) | 393 |
Protein length (aa) | 131 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF04178 | Got1 | Got1/Sft2-like family | 3.9E-11 | 32 | 106 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q03554|GOT1_YEAST | Protein transport protein GOT1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GOT1 PE=1 SV=1 | 32 | 120 | 8.0E-21 |
sp|Q54CL4|GOT1_DICDI | Protein transport protein got1 homolog OS=Dictyostelium discoideum GN=golt1 PE=3 SV=1 | 38 | 124 | 3.0E-13 |
sp|Q9DCQ3|GOT1A_MOUSE | Vesicle transport protein GOT1A OS=Mus musculus GN=Golt1a PE=2 SV=1 | 32 | 94 | 6.0E-11 |
sp|Q20263|GOT1_CAEEL | Probable Golgi transport protein 1 OS=Caenorhabditis elegans GN=F41C3.4 PE=3 SV=2 | 32 | 106 | 2.0E-10 |
sp|Q6ZVE7|GOT1A_HUMAN | Vesicle transport protein GOT1A OS=Homo sapiens GN=GOLT1A PE=2 SV=1 | 14 | 94 | 2.0E-10 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q03554|GOT1_YEAST | Protein transport protein GOT1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GOT1 PE=1 SV=1 | 32 | 120 | 8.0E-21 |
sp|Q54CL4|GOT1_DICDI | Protein transport protein got1 homolog OS=Dictyostelium discoideum GN=golt1 PE=3 SV=1 | 38 | 124 | 3.0E-13 |
sp|Q9DCQ3|GOT1A_MOUSE | Vesicle transport protein GOT1A OS=Mus musculus GN=Golt1a PE=2 SV=1 | 32 | 94 | 6.0E-11 |
sp|Q20263|GOT1_CAEEL | Probable Golgi transport protein 1 OS=Caenorhabditis elegans GN=F41C3.4 PE=3 SV=2 | 32 | 106 | 2.0E-10 |
sp|Q6ZVE7|GOT1A_HUMAN | Vesicle transport protein GOT1A OS=Homo sapiens GN=GOLT1A PE=2 SV=1 | 14 | 94 | 2.0E-10 |
sp|Q2NKV8|GOT1A_BOVIN | Vesicle transport protein GOT1A OS=Bos taurus GN=GOLT1A PE=2 SV=1 | 32 | 95 | 3.0E-10 |
sp|Q9USJ2|GOT1_SCHPO | Protein transport protein got1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=got1 PE=3 SV=1 | 36 | 112 | 2.0E-09 |
sp|Q9CR60|GOT1B_MOUSE | Vesicle transport protein GOT1B OS=Mus musculus GN=Golt1b PE=1 SV=1 | 32 | 120 | 6.0E-08 |
sp|Q9Y3E0|GOT1B_HUMAN | Vesicle transport protein GOT1B OS=Homo sapiens GN=GOLT1B PE=1 SV=1 | 32 | 120 | 3.0E-07 |
sp|Q2YDE3|GOT1B_BOVIN | Vesicle transport protein GOT1B OS=Bos taurus GN=GOLT1B PE=2 SV=1 | 32 | 120 | 3.0E-07 |
GO Term | Description | Terminal node |
---|---|---|
GO:0016192 | vesicle-mediated transport | Yes |
GO:0051234 | establishment of localization | No |
GO:0051179 | localization | No |
GO:0006810 | transport | No |
GO:0008150 | biological_process | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 11 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 33 | 50 | 17 |
2 | 60 | 82 | 22 |
3 | 94 | 116 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >OphauG2|5432 MRNTRLAMGNVRITLLSLDPIPRKLILDMRKQLLFLIGLTIIIGPQKTMLFFARRQKAKGTAAFFAGLTLILMRW TFIGFLVESYGIAILFGDFLGTFASFARGLPIIGPYIGLLVDKIGLGRRNADLPV* |
Coding | >OphauG2|5432 ATGCGCAATACCAGGCTCGCAATGGGAAACGTACGCATTACCCTTCTCTCCCTCGACCCGATTCCTCGCAAGCTA ATCCTCGACATGCGAAAACAGCTTCTGTTTCTCATTGGCTTGACCATCATAATCGGACCGCAAAAGACAATGCTC TTCTTCGCCCGGAGGCAAAAGGCAAAGGGCACAGCTGCCTTTTTTGCGGGCCTCACCCTCATACTCATGCGCTGG ACCTTTATCGGGTTTCTCGTCGAATCTTATGGAATCGCCATTCTCTTTGGGGACTTTCTCGGCACGTTTGCCAGC TTCGCCCGCGGTCTGCCCATTATTGGACCCTACATTGGCCTGCTCGTCGACAAGATTGGCCTGGGGCGCAGAAAC GCCGATTTGCCTGTATAG |
Transcript | >OphauG2|5432 ATGCGCAATACCAGGCTCGCAATGGGAAACGTACGCATTACCCTTCTCTCCCTCGACCCGATTCCTCGCAAGCTA ATCCTCGACATGCGAAAACAGCTTCTGTTTCTCATTGGCTTGACCATCATAATCGGACCGCAAAAGACAATGCTC TTCTTCGCCCGGAGGCAAAAGGCAAAGGGCACAGCTGCCTTTTTTGCGGGCCTCACCCTCATACTCATGCGCTGG ACCTTTATCGGGTTTCTCGTCGAATCTTATGGAATCGCCATTCTCTTTGGGGACTTTCTCGGCACGTTTGCCAGC TTCGCCCGCGGTCTGCCCATTATTGGACCCTACATTGGCCTGCTCGTCGACAAGATTGGCCTGGGGCGCAGAAAC GCCGATTTGCCTGTATAG |
Gene | >OphauG2|5432 ATGCGCAATACCAGGCTCGCAATGGGAAACGTACGCATTACCCTTCTCTCCCTCGACCCGATTCCTCGCAAGCTA ATCCTCGACATGCGAAAACAGCTTCTGTTTCTCATTGGCTTGACCATCATAATCGGACCGCAAAAGACAATGCTC TTCTTCGCCCGGAGGCAAAAGGCAAAGGGCACAGCTGCCTTTTTTGCGGGCCTCACCCTCATACTCATGCGCTGG ACCTTTATCGGGTTTCTCGTCGAATCTTATGGAATCGCCATTCTCTTTGGGGACTTTCTCGGCACGTTTGCCAGC TTCGCCCGCGGTCTGCCCATTATTGGACCCTACATTGGCCTGCTCGTCGACAAGATTGGCCTGGGGCGCAGAAAC GCCGATTTGCCTGTATAG |