Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauG2|5422
Gene name
LocationContig_5:27342..29373
Strand-
Gene length (bp)2031
Transcript length (bp)2031
Coding sequence length (bp)2031
Protein length (aa) 677

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF08608 Wyosine_form Wyosine base formation 3.1E-24 527 595
PF04055 Radical_SAM Radical SAM superfamily 3.9E-22 342 516
PF00258 Flavodoxin_1 Flavodoxin 5.2E-07 24 165

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q08960|TYW1_YEAST S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TYW1 PE=1 SV=1 39 671 0.0E+00
sp|O59761|TYW1_SCHPO S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=tyw1 PE=3 SV=1 2 660 0.0E+00
sp|Q08C92|TYW1_DANRE S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase OS=Danio rerio GN=tyw1 PE=2 SV=1 23 660 2.0E-147
sp|Q2KHP8|TYW1_XENLA S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase OS=Xenopus laevis GN=tyw1 PE=2 SV=1 23 660 1.0E-145
sp|Q9NV66|TYW1_HUMAN S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase OS=Homo sapiens GN=TYW1 PE=2 SV=2 23 660 2.0E-145
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Swissprot ID Swissprot Description Start End E-value
sp|Q08960|TYW1_YEAST S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TYW1 PE=1 SV=1 39 671 0.0E+00
sp|O59761|TYW1_SCHPO S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=tyw1 PE=3 SV=1 2 660 0.0E+00
sp|Q08C92|TYW1_DANRE S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase OS=Danio rerio GN=tyw1 PE=2 SV=1 23 660 2.0E-147
sp|Q2KHP8|TYW1_XENLA S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase OS=Xenopus laevis GN=tyw1 PE=2 SV=1 23 660 1.0E-145
sp|Q9NV66|TYW1_HUMAN S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase OS=Homo sapiens GN=TYW1 PE=2 SV=2 23 660 2.0E-145
sp|Q8BJM7|TYW1_MOUSE S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase OS=Mus musculus GN=Tyw1 PE=1 SV=1 23 660 5.0E-145
sp|Q5REF9|TYW1_PONAB S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase OS=Pongo abelii GN=TYW1 PE=2 SV=1 23 660 2.0E-144
sp|Q8RXN5|TYW1_ARATH S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase OS=Arabidopsis thaliana GN=TYW1 PE=2 SV=1 84 672 1.0E-142
sp|Q8H8N3|TYW1_ORYSJ S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase OS=Oryza sativa subsp. japonica GN=TYW1 PE=2 SV=1 276 661 1.0E-138
sp|Q6NUM6|TYW1B_HUMAN S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase OS=Homo sapiens GN=TYW1B PE=2 SV=3 14 660 1.0E-112
sp|O59412|TYW1_PYRHO S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase OS=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) GN=taw1 PE=1 SV=1 270 597 1.0E-56
sp|Q9V1F9|TYW1_PYRAB S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase OS=Pyrococcus abyssi (strain GE5 / Orsay) GN=taw1 PE=1 SV=1 270 597 2.0E-56
sp|Q57705|TYW1_METJA S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=taw1 PE=1 SV=1 290 604 6.0E-41
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GO

GO Term Description Terminal node
GO:0003824 catalytic activity Yes
GO:0010181 FMN binding Yes
GO:0051536 iron-sulfur cluster binding Yes
GO:0003674 molecular_function No
GO:0032553 ribonucleotide binding No
GO:1901363 heterocyclic compound binding No
GO:0036094 small molecule binding No
GO:0005488 binding No
GO:0043168 anion binding No
GO:0051540 metal cluster binding No
GO:0097367 carbohydrate derivative binding No
GO:0043167 ion binding No
GO:0097159 organic cyclic compound binding No
GO:0000166 nucleotide binding No
GO:1901265 nucleoside phosphate binding No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup4420
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|5422 (this protein)
Ophiocordyceps australis map64 (Brazil) OphauB2|3883
Ophiocordyceps camponoti-floridani Ophcf2|04125
Ophiocordyceps camponoti-rufipedis Ophun1|4034
Ophiocordyceps kimflemingae Ophio5|7035
Ophiocordyceps subramaniannii Hirsu2|9150

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauG2|5422
MVFFSSVTAKTEAIAREYMAALKGSTTQLARDSGRQFLEPELHDLSEIDFEDFFVAPPKSVANAQFFYLFLIPSY
NIDTINDTLLQHLEETHHDFRIDTAPLAPLIGYSVFGFGDREGWPDEANGFCFQAKHLDKYMSKLTGRKRAYPIG
MGDMKSGHALRFSEWAGGIHDVLGHVARTRSLGEGVPGSGDAEESDDGEAADEDDGEAQLDLDQVGQSSADSSRP
LDDVEDLGKMMGSTDGETLPLAVDFTNYGGLFANTSTKPKATRCKTTAQLGPQVVKEMVAKNSPTYAALTKQGYS
IVGSHSGVKICRWTKSALRGRGSCYKYSLYGINSHQCMETTPSLSCSNKCVFCWRHGTNPVGTTWRWVVDAPDLI
FEGVKEQHYKKIKMMRGVPGVRAERYAEALRIRHCALSLVGEPIFYPHINEFLALLHNERISSFLVCNAQHPEQL
AALKAVTQLYVSIDASNRESLRKIDRPLHRDFWERFQRCLDILREKRFRHRTVFRLTLVKGFNVEDEAEGYAALV
DRGLPCFVEIKGVTYCGTSTSSNAGLSMSNVPFYWEVCDFARALEARLRARGLAYSIAAEHAHSCCILLASERFR
VAGKWHTHIDYERFFELLEERGADGEWTPEDYMGQETPEWALWGNGGFDPRDQRVDRKGRRIENVVVREQPPGEV
W*
Coding >OphauG2|5422
ATGGTCTTCTTTTCTTCCGTCACGGCAAAGACTGAAGCCATTGCCCGTGAATACATGGCTGCTTTGAAGGGGTCA
ACCACACAGCTGGCCAGAGACTCGGGTCGACAGTTTCTCGAGCCCGAGTTGCACGACCTATCTGAAATCGACTTT
GAAGACTTCTTTGTGGCACCGCCAAAGTCGGTGGCCAACGCTCAGTTTTTCTACCTTTTTTTGATACCCAGCTAC
AACATCGACACAATCAACGACACCCTTCTTCAGCACTTGGAGGAGACACACCACGACTTCCGCATTGACACAGCT
CCACTTGCTCCTCTGATTGGCTATTCTGTTTTTGGATTTGGCGACAGAGAGGGCTGGCCCGATGAAGCAAACGGC
TTCTGCTTCCAAGCCAAGCACTTGGACAAGTACATGTCCAAGCTAACGGGCCGCAAGCGGGCGTATCCCATCGGT
ATGGGAGACATGAAGAGTGGCCACGCCCTTCGCTTTTCCGAATGGGCTGGCGGTATCCACGATGTCTTGGGCCAC
GTTGCGCGCACTCGTAGCCTTGGAGAGGGCGTGCCTGGGAGTGGCGATGCCGAAGAGAGTGACGATGGCGAAGCA
GCAGACGAGGACGATGGCGAAGCGCAGCTTGACCTGGACCAGGTGGGCCAAAGTTCGGCCGACTCGTCGAGACCA
CTGGACGATGTCGAGGACCTTGGAAAAATGATGGGCTCGACAGATGGCGAGACGCTGCCCCTAGCAGTCGATTTT
ACAAACTATGGTGGTCTGTTCGCCAACACCAGTACAAAACCAAAGGCAACAAGATGCAAGACGACGGCCCAGCTA
GGACCTCAAGTGGTCAAGGAAATGGTTGCCAAGAACTCGCCAACGTACGCAGCCCTGACCAAACAAGGCTACTCC
ATTGTCGGCTCCCACTCGGGCGTCAAGATATGCCGCTGGACAAAGTCGGCGCTGCGCGGGCGCGGAAGCTGCTAC
AAGTATTCGCTCTACGGCATCAACTCGCACCAGTGCATGGAGACGACGCCGTCGCTCTCGTGCTCCAACAAGTGT
GTGTTTTGCTGGAGACACGGCACCAACCCTGTGGGCACGACATGGCGGTGGGTGGTGGATGCGCCAGACTTGATA
TTCGAGGGCGTCAAGGAGCAGCATTATAAAAAGATCAAAATGATGCGAGGTGTGCCGGGCGTGCGGGCGGAACGC
TACGCCGAGGCCTTGCGGATTCGGCACTGCGCCCTCTCGCTCGTGGGCGAGCCCATTTTCTATCCCCATATCAAT
GAGTTTTTGGCCCTGCTGCACAACGAGCGCATTTCTTCATTTCTCGTCTGCAACGCACAGCACCCAGAGCAGCTC
GCGGCGCTCAAGGCCGTCACGCAGCTCTACGTCTCCATTGACGCCTCGAACCGCGAGTCGCTGCGCAAAATCGAC
CGGCCGCTTCACCGCGACTTTTGGGAGCGTTTTCAGCGTTGCCTCGACATTCTGCGCGAGAAGCGCTTCCGCCAC
CGTACCGTCTTTCGCCTCACCCTTGTCAAGGGTTTCAACGTTGAGGACGAGGCAGAAGGCTATGCTGCGCTCGTG
GACCGCGGTCTTCCATGTTTTGTCGAAATCAAGGGCGTCACGTACTGCGGCACCTCGACGTCGTCGAATGCCGGG
CTGAGCATGTCGAATGTGCCTTTTTACTGGGAGGTGTGCGACTTTGCGCGGGCGCTTGAGGCGCGGCTGCGGGCT
CGCGGGCTCGCATATAGCATTGCGGCGGAGCATGCGCATAGCTGCTGCATCTTGCTGGCTAGCGAGCGCTTTAGA
GTTGCGGGCAAGTGGCACACGCATATTGACTATGAGCGCTTTTTTGAGCTGCTGGAAGAGAGGGGCGCCGACGGA
GAGTGGACGCCCGAGGATTACATGGGACAAGAGACGCCTGAGTGGGCTCTATGGGGGAATGGCGGGTTTGACCCG
CGCGACCAGAGGGTTGATCGCAAGGGGCGCAGGATTGAAAATGTAGTGGTTCGCGAGCAGCCGCCAGGCGAGGTT
TGGTGA
Transcript >OphauG2|5422
ATGGTCTTCTTTTCTTCCGTCACGGCAAAGACTGAAGCCATTGCCCGTGAATACATGGCTGCTTTGAAGGGGTCA
ACCACACAGCTGGCCAGAGACTCGGGTCGACAGTTTCTCGAGCCCGAGTTGCACGACCTATCTGAAATCGACTTT
GAAGACTTCTTTGTGGCACCGCCAAAGTCGGTGGCCAACGCTCAGTTTTTCTACCTTTTTTTGATACCCAGCTAC
AACATCGACACAATCAACGACACCCTTCTTCAGCACTTGGAGGAGACACACCACGACTTCCGCATTGACACAGCT
CCACTTGCTCCTCTGATTGGCTATTCTGTTTTTGGATTTGGCGACAGAGAGGGCTGGCCCGATGAAGCAAACGGC
TTCTGCTTCCAAGCCAAGCACTTGGACAAGTACATGTCCAAGCTAACGGGCCGCAAGCGGGCGTATCCCATCGGT
ATGGGAGACATGAAGAGTGGCCACGCCCTTCGCTTTTCCGAATGGGCTGGCGGTATCCACGATGTCTTGGGCCAC
GTTGCGCGCACTCGTAGCCTTGGAGAGGGCGTGCCTGGGAGTGGCGATGCCGAAGAGAGTGACGATGGCGAAGCA
GCAGACGAGGACGATGGCGAAGCGCAGCTTGACCTGGACCAGGTGGGCCAAAGTTCGGCCGACTCGTCGAGACCA
CTGGACGATGTCGAGGACCTTGGAAAAATGATGGGCTCGACAGATGGCGAGACGCTGCCCCTAGCAGTCGATTTT
ACAAACTATGGTGGTCTGTTCGCCAACACCAGTACAAAACCAAAGGCAACAAGATGCAAGACGACGGCCCAGCTA
GGACCTCAAGTGGTCAAGGAAATGGTTGCCAAGAACTCGCCAACGTACGCAGCCCTGACCAAACAAGGCTACTCC
ATTGTCGGCTCCCACTCGGGCGTCAAGATATGCCGCTGGACAAAGTCGGCGCTGCGCGGGCGCGGAAGCTGCTAC
AAGTATTCGCTCTACGGCATCAACTCGCACCAGTGCATGGAGACGACGCCGTCGCTCTCGTGCTCCAACAAGTGT
GTGTTTTGCTGGAGACACGGCACCAACCCTGTGGGCACGACATGGCGGTGGGTGGTGGATGCGCCAGACTTGATA
TTCGAGGGCGTCAAGGAGCAGCATTATAAAAAGATCAAAATGATGCGAGGTGTGCCGGGCGTGCGGGCGGAACGC
TACGCCGAGGCCTTGCGGATTCGGCACTGCGCCCTCTCGCTCGTGGGCGAGCCCATTTTCTATCCCCATATCAAT
GAGTTTTTGGCCCTGCTGCACAACGAGCGCATTTCTTCATTTCTCGTCTGCAACGCACAGCACCCAGAGCAGCTC
GCGGCGCTCAAGGCCGTCACGCAGCTCTACGTCTCCATTGACGCCTCGAACCGCGAGTCGCTGCGCAAAATCGAC
CGGCCGCTTCACCGCGACTTTTGGGAGCGTTTTCAGCGTTGCCTCGACATTCTGCGCGAGAAGCGCTTCCGCCAC
CGTACCGTCTTTCGCCTCACCCTTGTCAAGGGTTTCAACGTTGAGGACGAGGCAGAAGGCTATGCTGCGCTCGTG
GACCGCGGTCTTCCATGTTTTGTCGAAATCAAGGGCGTCACGTACTGCGGCACCTCGACGTCGTCGAATGCCGGG
CTGAGCATGTCGAATGTGCCTTTTTACTGGGAGGTGTGCGACTTTGCGCGGGCGCTTGAGGCGCGGCTGCGGGCT
CGCGGGCTCGCATATAGCATTGCGGCGGAGCATGCGCATAGCTGCTGCATCTTGCTGGCTAGCGAGCGCTTTAGA
GTTGCGGGCAAGTGGCACACGCATATTGACTATGAGCGCTTTTTTGAGCTGCTGGAAGAGAGGGGCGCCGACGGA
GAGTGGACGCCCGAGGATTACATGGGACAAGAGACGCCTGAGTGGGCTCTATGGGGGAATGGCGGGTTTGACCCG
CGCGACCAGAGGGTTGATCGCAAGGGGCGCAGGATTGAAAATGTAGTGGTTCGCGAGCAGCCGCCAGGCGAGGTT
TGGTGA
Gene >OphauG2|5422
ATGGTCTTCTTTTCTTCCGTCACGGCAAAGACTGAAGCCATTGCCCGTGAATACATGGCTGCTTTGAAGGGGTCA
ACCACACAGCTGGCCAGAGACTCGGGTCGACAGTTTCTCGAGCCCGAGTTGCACGACCTATCTGAAATCGACTTT
GAAGACTTCTTTGTGGCACCGCCAAAGTCGGTGGCCAACGCTCAGTTTTTCTACCTTTTTTTGATACCCAGCTAC
AACATCGACACAATCAACGACACCCTTCTTCAGCACTTGGAGGAGACACACCACGACTTCCGCATTGACACAGCT
CCACTTGCTCCTCTGATTGGCTATTCTGTTTTTGGATTTGGCGACAGAGAGGGCTGGCCCGATGAAGCAAACGGC
TTCTGCTTCCAAGCCAAGCACTTGGACAAGTACATGTCCAAGCTAACGGGCCGCAAGCGGGCGTATCCCATCGGT
ATGGGAGACATGAAGAGTGGCCACGCCCTTCGCTTTTCCGAATGGGCTGGCGGTATCCACGATGTCTTGGGCCAC
GTTGCGCGCACTCGTAGCCTTGGAGAGGGCGTGCCTGGGAGTGGCGATGCCGAAGAGAGTGACGATGGCGAAGCA
GCAGACGAGGACGATGGCGAAGCGCAGCTTGACCTGGACCAGGTGGGCCAAAGTTCGGCCGACTCGTCGAGACCA
CTGGACGATGTCGAGGACCTTGGAAAAATGATGGGCTCGACAGATGGCGAGACGCTGCCCCTAGCAGTCGATTTT
ACAAACTATGGTGGTCTGTTCGCCAACACCAGTACAAAACCAAAGGCAACAAGATGCAAGACGACGGCCCAGCTA
GGACCTCAAGTGGTCAAGGAAATGGTTGCCAAGAACTCGCCAACGTACGCAGCCCTGACCAAACAAGGCTACTCC
ATTGTCGGCTCCCACTCGGGCGTCAAGATATGCCGCTGGACAAAGTCGGCGCTGCGCGGGCGCGGAAGCTGCTAC
AAGTATTCGCTCTACGGCATCAACTCGCACCAGTGCATGGAGACGACGCCGTCGCTCTCGTGCTCCAACAAGTGT
GTGTTTTGCTGGAGACACGGCACCAACCCTGTGGGCACGACATGGCGGTGGGTGGTGGATGCGCCAGACTTGATA
TTCGAGGGCGTCAAGGAGCAGCATTATAAAAAGATCAAAATGATGCGAGGTGTGCCGGGCGTGCGGGCGGAACGC
TACGCCGAGGCCTTGCGGATTCGGCACTGCGCCCTCTCGCTCGTGGGCGAGCCCATTTTCTATCCCCATATCAAT
GAGTTTTTGGCCCTGCTGCACAACGAGCGCATTTCTTCATTTCTCGTCTGCAACGCACAGCACCCAGAGCAGCTC
GCGGCGCTCAAGGCCGTCACGCAGCTCTACGTCTCCATTGACGCCTCGAACCGCGAGTCGCTGCGCAAAATCGAC
CGGCCGCTTCACCGCGACTTTTGGGAGCGTTTTCAGCGTTGCCTCGACATTCTGCGCGAGAAGCGCTTCCGCCAC
CGTACCGTCTTTCGCCTCACCCTTGTCAAGGGTTTCAACGTTGAGGACGAGGCAGAAGGCTATGCTGCGCTCGTG
GACCGCGGTCTTCCATGTTTTGTCGAAATCAAGGGCGTCACGTACTGCGGCACCTCGACGTCGTCGAATGCCGGG
CTGAGCATGTCGAATGTGCCTTTTTACTGGGAGGTGTGCGACTTTGCGCGGGCGCTTGAGGCGCGGCTGCGGGCT
CGCGGGCTCGCATATAGCATTGCGGCGGAGCATGCGCATAGCTGCTGCATCTTGCTGGCTAGCGAGCGCTTTAGA
GTTGCGGGCAAGTGGCACACGCATATTGACTATGAGCGCTTTTTTGAGCTGCTGGAAGAGAGGGGCGCCGACGGA
GAGTGGACGCCCGAGGATTACATGGGACAAGAGACGCCTGAGTGGGCTCTATGGGGGAATGGCGGGTTTGACCCG
CGCGACCAGAGGGTTGATCGCAAGGGGCGCAGGATTGAAAATGTAGTGGTTCGCGAGCAGCCGCCAGGCGAGGTT
TGGTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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