Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauG2|5407
Gene name
LocationContig_499:4244..5430
Strand-
Gene length (bp)1186
Transcript length (bp)999
Coding sequence length (bp)999
Protein length (aa) 333

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00106 adh_short short chain dehydrogenase 8.0E-11 26 178
PF13561 adh_short_C2 Enoyl-(Acyl carrier protein) reductase 8.0E-12 32 226

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q6RVV4|TIC32_PEA Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum sativum GN=TIC32 PE=1 SV=1 25 327 4.0E-33
sp|A2RVM0|TIC32_ARATH Short-chain dehydrogenase TIC 32, chloroplastic OS=Arabidopsis thaliana GN=TIC32 PE=2 SV=1 25 323 2.0E-32
sp|Q91WL8|WWOX_MOUSE WW domain-containing oxidoreductase OS=Mus musculus GN=Wwox PE=1 SV=1 23 324 3.0E-32
sp|Q5F389|WWOX_CHICK WW domain-containing oxidoreductase OS=Gallus gallus GN=WWOX PE=2 SV=2 23 331 2.0E-31
sp|Q9QYF1|RDH11_MOUSE Retinol dehydrogenase 11 OS=Mus musculus GN=Rdh11 PE=1 SV=2 23 325 1.0E-30
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Swissprot ID Swissprot Description Start End E-value
sp|Q6RVV4|TIC32_PEA Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum sativum GN=TIC32 PE=1 SV=1 25 327 4.0E-33
sp|A2RVM0|TIC32_ARATH Short-chain dehydrogenase TIC 32, chloroplastic OS=Arabidopsis thaliana GN=TIC32 PE=2 SV=1 25 323 2.0E-32
sp|Q91WL8|WWOX_MOUSE WW domain-containing oxidoreductase OS=Mus musculus GN=Wwox PE=1 SV=1 23 324 3.0E-32
sp|Q5F389|WWOX_CHICK WW domain-containing oxidoreductase OS=Gallus gallus GN=WWOX PE=2 SV=2 23 331 2.0E-31
sp|Q9QYF1|RDH11_MOUSE Retinol dehydrogenase 11 OS=Mus musculus GN=Rdh11 PE=1 SV=2 23 325 1.0E-30
sp|Q8BYK4|RDH12_MOUSE Retinol dehydrogenase 12 OS=Mus musculus GN=Rdh12 PE=2 SV=1 23 325 3.0E-30
sp|Q8TC12|RDH11_HUMAN Retinol dehydrogenase 11 OS=Homo sapiens GN=RDH11 PE=1 SV=2 23 325 1.0E-29
sp|Q9NZC7|WWOX_HUMAN WW domain-containing oxidoreductase OS=Homo sapiens GN=WWOX PE=1 SV=1 23 328 2.0E-29
sp|Q5R9W5|WWOX_PONAB WW domain-containing oxidoreductase OS=Pongo abelii GN=WWOX PE=2 SV=1 23 328 3.0E-29
sp|Q96NR8|RDH12_HUMAN Retinol dehydrogenase 12 OS=Homo sapiens GN=RDH12 PE=1 SV=3 23 325 2.0E-28
sp|Q9ERI6|RDH14_MOUSE Retinol dehydrogenase 14 OS=Mus musculus GN=Rdh14 PE=1 SV=1 22 325 3.0E-27
sp|P59837|RDH12_BOVIN Retinol dehydrogenase 12 OS=Bos taurus GN=RDH12 PE=2 SV=1 25 325 4.0E-27
sp|Q9HBH5|RDH14_HUMAN Retinol dehydrogenase 14 OS=Homo sapiens GN=RDH14 PE=1 SV=1 22 325 4.0E-27
sp|O74959|YJCD_SCHPO Uncharacterized oxidoreductase C736.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC736.13 PE=3 SV=1 23 290 3.0E-26
sp|Q803A8|WWOX_DANRE WW domain-containing oxidoreductase OS=Danio rerio GN=wwox PE=2 SV=1 23 326 6.0E-24
sp|Q9VLU5|WWOX_DROME WW domain-containing oxidoreductase OS=Drosophila melanogaster GN=Wwox PE=2 SV=1 23 326 6.0E-23
sp|Q8NBN7|RDH13_HUMAN Retinol dehydrogenase 13 OS=Homo sapiens GN=RDH13 PE=1 SV=2 23 233 5.0E-21
sp|Q8CEE7|RDH13_MOUSE Retinol dehydrogenase 13 OS=Mus musculus GN=Rdh13 PE=1 SV=1 23 325 1.0E-20
sp|Q8N5I4|DHRSX_HUMAN Dehydrogenase/reductase SDR family member on chromosome X OS=Homo sapiens GN=DHRSX PE=2 SV=2 54 290 1.0E-18
sp|P35320|OXIR_STRLI Probable oxidoreductase OS=Streptomyces lividans PE=3 SV=1 21 290 1.0E-17
sp|Q03326|OXIR_STRAT Probable oxidoreductase OS=Streptomyces antibioticus PE=3 SV=1 21 290 2.0E-17
sp|Q08651|ENV9_YEAST Probable oxidoreductase ENV9 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ENV9 PE=1 SV=1 109 290 7.0E-16
sp|Q5SS80|DHR13_MOUSE Dehydrogenase/reductase SDR family member 13 OS=Mus musculus GN=Dhrs13 PE=1 SV=1 23 325 7.0E-14
sp|Q17QU7|DHR13_BOVIN Dehydrogenase/reductase SDR family member 13 OS=Bos taurus GN=DHRS13 PE=2 SV=1 23 325 1.0E-12
sp|Q8VBZ0|DHRSX_MOUSE Dehydrogenase/reductase SDR family member on chromosome X homolog OS=Mus musculus GN=Dhrsx PE=1 SV=2 25 298 1.0E-11
sp|Q6UX07|DHR13_HUMAN Dehydrogenase/reductase SDR family member 13 OS=Homo sapiens GN=DHRS13 PE=2 SV=1 23 325 2.0E-11
sp|Q42536|PORA_ARATH Protochlorophyllide reductase A, chloroplastic OS=Arabidopsis thaliana GN=PORA PE=1 SV=2 7 325 2.0E-09
sp|Q42850|PORB_HORVU Protochlorophyllide reductase B, chloroplastic OS=Hordeum vulgare GN=PORB PE=2 SV=1 8 325 1.0E-08
sp|A0PJE2|DHR12_HUMAN Dehydrogenase/reductase SDR family member 12 OS=Homo sapiens GN=DHRS12 PE=2 SV=2 23 223 1.0E-08
sp|Q9ZAU1|DNRU_STRPE Putative daunorubicin C-13 ketoreductase DnrU OS=Streptomyces peucetius GN=dnrU PE=3 SV=1 23 306 1.0E-08
sp|Q53877|DNRU_STRS5 Putative daunorubicin C-13 ketoreductase DnrU OS=Streptomyces sp. (strain C5) PE=3 SV=1 23 309 2.0E-08
sp|Q8W3D9|PORB_ORYSJ Protochlorophyllide reductase B, chloroplastic OS=Oryza sativa subsp. japonica GN=PORB PE=2 SV=1 10 325 6.0E-08
sp|A6QP05|DHR12_BOVIN Dehydrogenase/reductase SDR family member 12 OS=Bos taurus GN=DHRS12 PE=2 SV=1 23 256 3.0E-07
sp|Q39617|POR_CHLRE Protochlorophyllide reductase, chloroplastic OS=Chlamydomonas reinhardtii GN=PORA PE=3 SV=1 26 325 7.0E-07
sp|O13822|YEE6_SCHPO Uncharacterized oxidoreductase C19A8.06 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC19A8.06 PE=3 SV=1 16 230 2.0E-06
sp|Q7XKF3|PORA_ORYSJ Protochlorophyllide reductase A, chloroplastic OS=Oryza sativa subsp. japonica GN=PORA PE=2 SV=1 78 325 3.0E-06
sp|Q41578|PORA_WHEAT Protochlorophyllide reductase A, chloroplastic OS=Triticum aestivum GN=PORA PE=3 SV=1 78 325 5.0E-06
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GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 62 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauG2|5407
MSETPKTAVPTAAEMTAKYADLIKGKTILTTGVSPTSIGAEFVKAVAAASPALLILAGRDADKLKQTQEHIVEQH
PKTAIRLLLLNLDSQAAIRKAADEVKSWASVPCIHVVVNSAGIMAQPYGQTEDGIERHLGSNHIGHFLFVNLIMD
KILAAPEPRIVSVTSDGHRLSAIRWADYNFDEGRTYNRWLAYGQSKTANILFAVSLAEKLGKRGLRAYSVHPGVI
YGTGLGSHLDMSPTGDFAELAALERSQGNQAGWQPFDLISAQQGAATHVYASFDPDVKKHNGVYLLECRVSDPWT
DAVKCWSVNEIEAELLWRLSEKLVGQEFSYKQ*
Coding >OphauG2|5407
ATGTCAGAGACTCCAAAGACGGCCGTCCCAACGGCGGCGGAAATGACGGCCAAGTACGCGGATTTGATCAAGGGC
AAGACCATCCTGACGACAGGAGTGTCACCGACTAGCATTGGGGCAGAATTTGTCAAGGCCGTGGCCGCAGCATCT
CCGGCGCTGCTGATTCTGGCGGGCCGCGACGCGGACAAGCTGAAGCAGACGCAAGAGCACATCGTTGAGCAGCAC
CCCAAGACGGCGATACGGCTGCTGCTGCTGAATCTGGACTCGCAGGCGGCGATACGCAAGGCGGCTGATGAGGTC
AAGTCGTGGGCCAGTGTGCCATGTATCCATGTCGTGGTCAACAGCGCTGGCATCATGGCGCAGCCCTACGGCCAG
ACTGAGGATGGCATCGAGAGACATTTGGGTTCCAACCACATTGGGCACTTTCTCTTTGTCAATCTCATCATGGAT
AAGATTCTGGCGGCACCAGAGCCACGCATCGTGAGCGTTACCAGCGACGGCCATCGGCTCAGCGCGATTCGATGG
GCCGACTACAACTTTGACGAGGGCCGAACATACAACCGGTGGCTGGCCTACGGACAATCCAAGACTGCCAATATT
CTCTTTGCCGTGTCGCTGGCTGAGAAACTGGGCAAGCGAGGCCTGAGGGCATACAGCGTGCATCCAGGCGTCATC
TATGGCACCGGTCTGGGCAGCCATCTCGACATGTCTCCCACTGGCGACTTTGCCGAGCTGGCTGCACTGGAGCGC
AGTCAGGGAAACCAAGCAGGCTGGCAGCCGTTTGATCTGATTTCAGCGCAACAAGGAGCCGCAACACACGTCTAT
GCGTCGTTTGACCCTGACGTCAAGAAGCACAATGGCGTCTATCTGCTCGAGTGTCGAGTGTCGGACCCGTGGACC
GACGCCGTCAAGTGCTGGAGCGTCAACGAAATTGAAGCCGAGCTGCTGTGGCGGCTCAGTGAGAAGCTGGTGGGC
CAAGAGTTTTCCTACAAACAATGA
Transcript >OphauG2|5407
ATGTCAGAGACTCCAAAGACGGCCGTCCCAACGGCGGCGGAAATGACGGCCAAGTACGCGGATTTGATCAAGGGC
AAGACCATCCTGACGACAGGAGTGTCACCGACTAGCATTGGGGCAGAATTTGTCAAGGCCGTGGCCGCAGCATCT
CCGGCGCTGCTGATTCTGGCGGGCCGCGACGCGGACAAGCTGAAGCAGACGCAAGAGCACATCGTTGAGCAGCAC
CCCAAGACGGCGATACGGCTGCTGCTGCTGAATCTGGACTCGCAGGCGGCGATACGCAAGGCGGCTGATGAGGTC
AAGTCGTGGGCCAGTGTGCCATGTATCCATGTCGTGGTCAACAGCGCTGGCATCATGGCGCAGCCCTACGGCCAG
ACTGAGGATGGCATCGAGAGACATTTGGGTTCCAACCACATTGGGCACTTTCTCTTTGTCAATCTCATCATGGAT
AAGATTCTGGCGGCACCAGAGCCACGCATCGTGAGCGTTACCAGCGACGGCCATCGGCTCAGCGCGATTCGATGG
GCCGACTACAACTTTGACGAGGGCCGAACATACAACCGGTGGCTGGCCTACGGACAATCCAAGACTGCCAATATT
CTCTTTGCCGTGTCGCTGGCTGAGAAACTGGGCAAGCGAGGCCTGAGGGCATACAGCGTGCATCCAGGCGTCATC
TATGGCACCGGTCTGGGCAGCCATCTCGACATGTCTCCCACTGGCGACTTTGCCGAGCTGGCTGCACTGGAGCGC
AGTCAGGGAAACCAAGCAGGCTGGCAGCCGTTTGATCTGATTTCAGCGCAACAAGGAGCCGCAACACACGTCTAT
GCGTCGTTTGACCCTGACGTCAAGAAGCACAATGGCGTCTATCTGCTCGAGTGTCGAGTGTCGGACCCGTGGACC
GACGCCGTCAAGTGCTGGAGCGTCAACGAAATTGAAGCCGAGCTGCTGTGGCGGCTCAGTGAGAAGCTGGTGGGC
CAAGAGTTTTCCTACAAACAATGA
Gene >OphauG2|5407
ATGTCAGAGACTCCAAAGACGGCCGTCCCAACGGCGGCGGAAATGACGGCCAAGTACGCGGATTTGATCAAGGGC
AAGACCATCCTGACGACAGGAGTGTCACCGACTAGCATTGGGGCAGAATTTGTCAAGGCCGTGGCCGCAGCATCT
CCGGCGCTGCTGATTCTGGCGGGCCGCGACGCGGACAAGCTGAAGCAGACGCAAGAGCACATCGTTGAGCAGCAC
CCCAAGACGGCGATACGGCTGCTGCTGCTGAATCTGGACTCGCAGGCGGCGATACGCAAGGCGGCTGATGAGGTC
AAGTCGTGGGCCAGTGTGCCATGTATCCATGTCGTGGTCAACAGCGCTGGCATCATGGCGCAGCCCTACGGCCAG
ACTGAGGATGGCATCGAGAGACATTTGGGTTCCAACCACATTGGGCACTTTCTCTTTGTCAATCTCATCATGGAT
AAGATTCTGGCGGCACCAGAGCCACGCATCGTGAGCGTTACCAGCGACGGCCATCGGCTCAGCGCGATTCGATGG
GCCGACTACAACTTTGACGTGAGCGCGCGCGCGCAACCGGCCTCTGCTGCTGTGAGCTGACTTGGCTTGGCATGT
AGGAGGGCCGAACATACAACCGGTGGCTGGCCTACGGACAATCCAAGACTGCCAATATTCTCTTTGCCGTGTCGC
TGGCTGAGAAACTGGGCAAGCGAGGCCTGAGGGCATACAGCGTGCATCCAGGCGTCATCTATGGCACCGGTCTGG
GCAGCCATCTCGACATGTCTCCCACTGGCGACTTTGCCGAGCTGGGTATGTCTGTCCATGCAGCTCCCAATTCCA
TGAGTGCTGGGGGCCCAGGCTGATTGATTCTACTGGCGTGCAGCTGCACTGGAGCGCAGTCAGGGAAACCAAGCA
GGCTGGCAGCCGTTTGATCTGATTTCAGCGCAACAAGGAGCCGCAACACACGTCTATGCGTCGTTTGACCCTGAC
GTCAAGAGTTAGCCATAAAGCCAAGGACTCGGTGTGTGGTAAAAGGGCTAATTCGACTCTAGAGCACAATGGCGT
CTATCTGCTCGAGTGTCGAGTGTCGGACCCGTGGACCGACGCCGTCAAGTGCTGGAGCGTCAACGAAATTGAAGC
CGAGCTGCTGTGGCGGCTCAGTGAGAAGCTGGTGGGCCAAGAGTTTTCCTACAAACAATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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