© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauG2|5263 |
| Gene name | |
| Location | Contig_477:4192..4935 |
| Strand | - |
| Gene length (bp) | 743 |
| Transcript length (bp) | 693 |
| Coding sequence length (bp) | 693 |
| Protein length (aa) | 231 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF06687 | SUR7 | SUR7/PalI family | 5.1E-18 | 10 | 188 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q7SFN5|PALI_NEUCR | pH-response regulator protein palI/prr-5 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=prr-5 PE=3 SV=2 | 14 | 211 | 3.0E-10 |
| sp|Q51MB1|PALI_MAGO7 | pH-response regulator protein palI/RIM9 OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN=RIM9 PE=3 SV=1 | 51 | 211 | 1.0E-08 |
| sp|Q08157|YOL19_YEAST | Uncharacterized membrane protein YOL019W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YOL019W PE=1 SV=1 | 16 | 206 | 7.0E-08 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0005886 | plasma membrane | Yes |
| GO:0005575 | cellular_component | No |
| GO:0016020 | membrane | No |
| GO:0110165 | cellular anatomical entity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 31 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 10 | 32 | 22 |
| 2 | 106 | 128 | 22 |
| 3 | 133 | 155 | 22 |
| 4 | 175 | 197 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauG2|5263 MGVGTFIHHIGTFLLLVALVLLIVVDVTAPVVNKRAIMRVHLGNTVPGNQVTFGTFGYCHLGIRDSDECSHSRIG YNPAAVMSRIDGSTFSRSAERSAKVLTRVMVLHPIATFLCLVALLLCIAAGMVGSFLAAIFAGLAFLTTIIAMIC DFVLFSIIKHDVNKHGRSRASWSSGIWLMLVSAICTLLASAIVFSTCCVRRSSKRRATQNKDETWTETTPAPRRH FWQRR* |
| Coding | >OphauG2|5263 ATGGGTGTCGGCACCTTTATCCACCACATCGGCACCTTCCTGCTGCTTGTGGCACTGGTGCTTCTCATCGTGGTC GATGTGACTGCACCTGTTGTCAACAAGCGAGCCATTATGCGTGTCCATCTGGGAAACACGGTCCCGGGGAACCAG GTCACCTTTGGCACCTTTGGTTACTGCCACCTGGGCATTCGTGACTCGGACGAGTGCTCACACTCGCGCATCGGC TATAATCCTGCCGCCGTCATGTCGCGCATCGACGGCTCCACATTCAGCAGAAGCGCTGAACGCAGCGCCAAGGTG CTCACCCGCGTCATGGTGCTTCACCCCATTGCCACCTTTCTGTGTCTGGTCGCCCTGCTCCTGTGCATCGCCGCC GGCATGGTGGGCTCCTTTCTCGCCGCCATCTTTGCCGGCCTGGCCTTCCTCACCACCATCATTGCCATGATTTGC GACTTTGTCCTCTTCAGCATCATCAAGCACGACGTCAACAAGCACGGCCGCAGCCGAGCCTCCTGGAGCTCGGGC ATCTGGCTCATGCTCGTCTCTGCCATCTGCACTCTCCTTGCCTCGGCCATTGTCTTTTCTACCTGCTGTGTCAGA CGCTCAAGCAAGCGCCGTGCAACACAGAACAAGGACGAGACGTGGACCGAAACCACTCCCGCCCCGCGCCGTCAC TTCTGGCAACGCCGCTAA |
| Transcript | >OphauG2|5263 ATGGGTGTCGGCACCTTTATCCACCACATCGGCACCTTCCTGCTGCTTGTGGCACTGGTGCTTCTCATCGTGGTC GATGTGACTGCACCTGTTGTCAACAAGCGAGCCATTATGCGTGTCCATCTGGGAAACACGGTCCCGGGGAACCAG GTCACCTTTGGCACCTTTGGTTACTGCCACCTGGGCATTCGTGACTCGGACGAGTGCTCACACTCGCGCATCGGC TATAATCCTGCCGCCGTCATGTCGCGCATCGACGGCTCCACATTCAGCAGAAGCGCTGAACGCAGCGCCAAGGTG CTCACCCGCGTCATGGTGCTTCACCCCATTGCCACCTTTCTGTGTCTGGTCGCCCTGCTCCTGTGCATCGCCGCC GGCATGGTGGGCTCCTTTCTCGCCGCCATCTTTGCCGGCCTGGCCTTCCTCACCACCATCATTGCCATGATTTGC GACTTTGTCCTCTTCAGCATCATCAAGCACGACGTCAACAAGCACGGCCGCAGCCGAGCCTCCTGGAGCTCGGGC ATCTGGCTCATGCTCGTCTCTGCCATCTGCACTCTCCTTGCCTCGGCCATTGTCTTTTCTACCTGCTGTGTCAGA CGCTCAAGCAAGCGCCGTGCAACACAGAACAAGGACGAGACGTGGACCGAAACCACTCCCGCCCCGCGCCGTCAC TTCTGGCAACGCCGCTAA |
| Gene | >OphauG2|5263 ATGGGTGTCGGCACCTTTATCCACCACATCGGCACCTTCCTGCTGCTTGTGGCACTGGTGCTTCTCATCGTGGTC GATGTGACTGCACCTGTTGTCAACAAGCGAGCCATTATGCGTGTCCATCTGGGAAACACGGTCCCGGGGAACCAG GTCACCTTTGGCACCTTTGGTTACTGCCACCTGGGCATTCGGTAAGTTGCCAACATTACCATCCATAGTCACTCA ACACTGACTCCCGCAGTGACTCGGACGAGTGCTCACACTCGCGCATCGGCTATAATCCTGCCGCCGTCATGTCGC GCATCGACGGCTCCACATTCAGCAGAAGCGCTGAACGCAGCGCCAAGGTGCTCACCCGCGTCATGGTGCTTCACC CCATTGCCACCTTTCTGTGTCTGGTCGCCCTGCTCCTGTGCATCGCCGCCGGCATGGTGGGCTCCTTTCTCGCCG CCATCTTTGCCGGCCTGGCCTTCCTCACCACCATCATTGCCATGATTTGCGACTTTGTCCTCTTCAGCATCATCA AGCACGACGTCAACAAGCACGGCCGCAGCCGAGCCTCCTGGAGCTCGGGCATCTGGCTCATGCTCGTCTCTGCCA TCTGCACTCTCCTTGCCTCGGCCATTGTCTTTTCTACCTGCTGTGTCAGACGCTCAAGCAAGCGCCGTGCAACAC AGAACAAGGACGAGACGTGGACCGAAACCACTCCCGCCCCGCGCCGTCACTTCTGGCAACGCCGCTAA |