Fungal Genomics

at Utrecht University

General Properties

Protein ID	OphauG2\|5240
Gene name
Location	Contig_473:3760..4771
Strand	-
Gene length (bp)	1011
Transcript length (bp)	870
Coding sequence length (bp)	870
Protein length (aa)	290

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF04893	Yip1	Yip1 domain	3.2E-14	93	252

Swissprot hits

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q9UTD3\|YIP5_SCHPO	Protein YIP5 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=yip5 PE=3 SV=1	10	263	3.0E-43
sp\|Q9Y548\|YIPF1_HUMAN	Protein YIPF1 OS=Homo sapiens GN=YIPF1 PE=1 SV=1	67	262	9.0E-31
sp\|Q5RBL0\|YIPF1_PONAB	Protein YIPF1 OS=Pongo abelii GN=YIPF1 PE=2 SV=1	67	262	3.0E-30
sp\|Q6P6G5\|YIPF1_RAT	Protein YIPF1 OS=Rattus norvegicus GN=Yipf1 PE=2 SV=1	67	262	3.0E-30
sp\|Q91VU1\|YIPF1_MOUSE	Protein YIPF1 OS=Mus musculus GN=Yipf1 PE=2 SV=1	67	262	3.0E-30

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q9UTD3\|YIP5_SCHPO	Protein YIP5 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=yip5 PE=3 SV=1	10	263	3.0E-43
sp\|Q9Y548\|YIPF1_HUMAN	Protein YIPF1 OS=Homo sapiens GN=YIPF1 PE=1 SV=1	67	262	9.0E-31
sp\|Q5RBL0\|YIPF1_PONAB	Protein YIPF1 OS=Pongo abelii GN=YIPF1 PE=2 SV=1	67	262	3.0E-30
sp\|Q6P6G5\|YIPF1_RAT	Protein YIPF1 OS=Rattus norvegicus GN=Yipf1 PE=2 SV=1	67	262	3.0E-30
sp\|Q91VU1\|YIPF1_MOUSE	Protein YIPF1 OS=Mus musculus GN=Yipf1 PE=2 SV=1	67	262	3.0E-30
sp\|Q54TS4\|YIPF1_DICDI	Protein YIPF1 homolog OS=Dictyostelium discoideum GN=yipf1 PE=3 SV=1	53	266	2.0E-27
sp\|Q99LP8\|YIPF2_MOUSE	Protein YIPF2 OS=Mus musculus GN=Yipf2 PE=2 SV=1	60	262	1.0E-25
sp\|Q9BWQ6\|YIPF2_HUMAN	Protein YIPF2 OS=Homo sapiens GN=YIPF2 PE=1 SV=1	67	272	2.0E-25
sp\|Q5XIT3\|YIPF2_RAT	Protein YIPF2 OS=Rattus norvegicus GN=Yipf2 PE=2 SV=1	60	262	1.0E-21
sp\|P53108\|YIP5_YEAST	Protein YIP5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YIP5 PE=1 SV=1	70	262	2.0E-15

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GO

GO Term	Description	Terminal node
GO:0016020	membrane	Yes
GO:0005575	cellular_component	No
GO:0110165	cellular anatomical entity	No

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 57	0.45

Transmembrane Domains

Domain #	Start	End	Length
1	110	132	22
2	147	169	22
3	182	201	19
4	206	228	22
5	241	263	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>OphauG2\|5240 MSGSGYDAVVDVDDEGDLGHTDLREDLEFHNSNFDEAATNNRKGGASSGLPPPATASNPSSSSKRFLWTISFYAQ FFDVDTSAVLARCWASLFPRANFLDVLEGNPDLYGPFWIATTVVLILFLGGTISQYLSMTKSTPFAYDFRLLSGA AGLVYGYTLFIPVILFLALRYFGSDTANLLECWALYGYSNLIWIPVAVISWSPIEILNWVFVGIGFGMSVAFLVR NLYPVLSATDRQVSKALLIMVVVLHAGLSLTIKILFFAHGSPVARAPGQGGPDKAAGDGGPERL*
Coding	>OphauG2\|5240 ATGTCTGGGTCTGGCTACGATGCCGTGGTGGATGTGGACGACGAGGGCGATCTAGGACACACGGATCTCCGAGAG GACCTTGAATTCCACAACTCCAACTTTGACGAAGCGGCGACGAACAACCGCAAAGGCGGAGCATCGTCTGGGCTC CCTCCGCCAGCGACAGCTTCCAACCCATCCTCCTCGTCGAAGCGGTTTCTCTGGACCATTTCCTTTTACGCGCAA TTCTTCGATGTGGACACGTCTGCGGTGCTGGCGCGGTGCTGGGCGTCTCTGTTCCCGCGGGCAAACTTTCTCGAC GTGCTGGAGGGGAATCCCGACCTGTACGGACCGTTTTGGATCGCGACAACGGTCGTCTTGATTCTCTTTTTAGGC GGGACTATAAGCCAGTACCTGTCCATGACCAAGTCGACGCCGTTTGCGTATGATTTTAGATTGTTGAGCGGAGCG GCTGGCTTGGTCTATGGGTACACGCTCTTCATACCCGTCATTCTCTTCCTTGCCCTGAGGTATTTCGGCAGCGAC ACGGCAAACCTGCTCGAGTGCTGGGCTCTCTACGGCTACTCAAACCTCATTTGGATCCCGGTGGCCGTGATTAGC TGGTCGCCGATTGAAATCCTCAACTGGGTCTTTGTCGGGATTGGGTTTGGCATGTCGGTGGCGTTTTTGGTGCGC AATCTCTACCCAGTCTTGAGCGCCACGGATCGCCAGGTCAGCAAGGCACTGCTCATCATGGTTGTCGTGCTGCAC GCCGGCCTCTCTCTAACCATTAAGATTCTCTTTTTTGCCCATGGGAGCCCTGTGGCGAGGGCGCCGGGCCAAGGC GGGCCAGACAAGGCGGCTGGGGACGGGGGCCCAGAAAGATTGTAA
Transcript	>OphauG2\|5240 ATGTCTGGGTCTGGCTACGATGCCGTGGTGGATGTGGACGACGAGGGCGATCTAGGACACACGGATCTCCGAGAG GACCTTGAATTCCACAACTCCAACTTTGACGAAGCGGCGACGAACAACCGCAAAGGCGGAGCATCGTCTGGGCTC CCTCCGCCAGCGACAGCTTCCAACCCATCCTCCTCGTCGAAGCGGTTTCTCTGGACCATTTCCTTTTACGCGCAA TTCTTCGATGTGGACACGTCTGCGGTGCTGGCGCGGTGCTGGGCGTCTCTGTTCCCGCGGGCAAACTTTCTCGAC GTGCTGGAGGGGAATCCCGACCTGTACGGACCGTTTTGGATCGCGACAACGGTCGTCTTGATTCTCTTTTTAGGC GGGACTATAAGCCAGTACCTGTCCATGACCAAGTCGACGCCGTTTGCGTATGATTTTAGATTGTTGAGCGGAGCG GCTGGCTTGGTCTATGGGTACACGCTCTTCATACCCGTCATTCTCTTCCTTGCCCTGAGGTATTTCGGCAGCGAC ACGGCAAACCTGCTCGAGTGCTGGGCTCTCTACGGCTACTCAAACCTCATTTGGATCCCGGTGGCCGTGATTAGC TGGTCGCCGATTGAAATCCTCAACTGGGTCTTTGTCGGGATTGGGTTTGGCATGTCGGTGGCGTTTTTGGTGCGC AATCTCTACCCAGTCTTGAGCGCCACGGATCGCCAGGTCAGCAAGGCACTGCTCATCATGGTTGTCGTGCTGCAC GCCGGCCTCTCTCTAACCATTAAGATTCTCTTTTTTGCCCATGGGAGCCCTGTGGCGAGGGCGCCGGGCCAAGGC GGGCCAGACAAGGCGGCTGGGGACGGGGGCCCAGAAAGATTGTAA
Gene	>OphauG2\|5240 ATGTCTGGGTCTGGCTACGATGCCGTGGTGGATGTGGACGACGAGGTTGGCGGATGATTTTGAGTAAAGGCTGAA TCGACGGCTTGGCTGACATTGTTGGACACATTAGGGCGATCTAGGACACACGGATCTCCGAGAGGACCTTGAATT CCACAACTCCAACTTTGACGAAGCGGCGACGAACAACCGCAAAGGCGGAGCATCGTCTGGGCTCCCTCCGCCAGC GACAGCTTCCAACCCATCCTCCTCGTCGAAGCGGTTTCTCTGGACCATTTCCTTTTACGCGCAATTCTTCGATGT GGACACGTCTGCGGTGCTGGCGCGGTGCTGGGCGTCTCTGTTCCCGCGGGCAAACTTTCTCGACGTGCTGGAGGG GAATCCCGACCTGTACGGACCGTTTTGGATCGCGACAACGGTCGTCTTGATTCTCTTTTTAGGCGGGACTATAAG CCAGTACCTGTCCATGACCAAGTCGACGCCGTTTGCGTATGATTTTAGATTGTTGAGCGGTAAGTGGGCTTGTGT TCTTTTTTTGGCAAGGACCGAAAACAAAAAGGCTAACAAGTCTTGGGGGGGAAATAAAAAGGAGCGGCTGGCTTG GTCTATGGGTACACGCTCTTCATACCCGTCATTCTCTTCCTTGCCCTGAGGTATTTCGGCAGCGACACGGCAAAC CTGCTCGAGTGCTGGGCTCTCTACGGCTACTCAAACCTCATTTGGATCCCGGTGGCCGTGATTAGCTGGTCGCCG ATTGAAATCCTCAACTGGGTCTTTGTCGGGATTGGGTTTGGCATGTCGGTGGCGTTTTTGGTGCGCAATCTCTAC CCAGTCTTGAGCGCCACGGATCGCCAGGTCAGCAAGGCACTGCTCATCATGGTTGTCGTGCTGCACGCCGGCCTC TCTCTAACCATTAAGATTCTCTTTTTTGCCCATGGGAGCCCTGTGGCGAGGGCGCCGGGCCAAGGCGGGCCAGAC AAGGCGGCTGGGGACGGGGGCCCAGAAAGATTGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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