Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauG2|5240
Gene name
LocationContig_473:3760..4771
Strand-
Gene length (bp)1011
Transcript length (bp)870
Coding sequence length (bp)870
Protein length (aa) 290

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04893 Yip1 Yip1 domain 3.2E-14 93 252

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q9UTD3|YIP5_SCHPO Protein YIP5 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=yip5 PE=3 SV=1 10 263 3.0E-43
sp|Q9Y548|YIPF1_HUMAN Protein YIPF1 OS=Homo sapiens GN=YIPF1 PE=1 SV=1 67 262 9.0E-31
sp|Q5RBL0|YIPF1_PONAB Protein YIPF1 OS=Pongo abelii GN=YIPF1 PE=2 SV=1 67 262 3.0E-30
sp|Q6P6G5|YIPF1_RAT Protein YIPF1 OS=Rattus norvegicus GN=Yipf1 PE=2 SV=1 67 262 3.0E-30
sp|Q91VU1|YIPF1_MOUSE Protein YIPF1 OS=Mus musculus GN=Yipf1 PE=2 SV=1 67 262 3.0E-30
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Swissprot ID Swissprot Description Start End E-value
sp|Q9UTD3|YIP5_SCHPO Protein YIP5 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=yip5 PE=3 SV=1 10 263 3.0E-43
sp|Q9Y548|YIPF1_HUMAN Protein YIPF1 OS=Homo sapiens GN=YIPF1 PE=1 SV=1 67 262 9.0E-31
sp|Q5RBL0|YIPF1_PONAB Protein YIPF1 OS=Pongo abelii GN=YIPF1 PE=2 SV=1 67 262 3.0E-30
sp|Q6P6G5|YIPF1_RAT Protein YIPF1 OS=Rattus norvegicus GN=Yipf1 PE=2 SV=1 67 262 3.0E-30
sp|Q91VU1|YIPF1_MOUSE Protein YIPF1 OS=Mus musculus GN=Yipf1 PE=2 SV=1 67 262 3.0E-30
sp|Q54TS4|YIPF1_DICDI Protein YIPF1 homolog OS=Dictyostelium discoideum GN=yipf1 PE=3 SV=1 53 266 2.0E-27
sp|Q99LP8|YIPF2_MOUSE Protein YIPF2 OS=Mus musculus GN=Yipf2 PE=2 SV=1 60 262 1.0E-25
sp|Q9BWQ6|YIPF2_HUMAN Protein YIPF2 OS=Homo sapiens GN=YIPF2 PE=1 SV=1 67 272 2.0E-25
sp|Q5XIT3|YIPF2_RAT Protein YIPF2 OS=Rattus norvegicus GN=Yipf2 PE=2 SV=1 60 262 1.0E-21
sp|P53108|YIP5_YEAST Protein YIP5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YIP5 PE=1 SV=1 70 262 2.0E-15
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GO

GO Term Description Terminal node
GO:0016020 membrane Yes
GO:0005575 cellular_component No
GO:0110165 cellular anatomical entity No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

Domain # Start End Length
1 110 132 22
2 147 169 22
3 182 201 19
4 206 228 22
5 241 263 22

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup5022
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|5240 (this protein)
Ophiocordyceps australis map64 (Brazil) OphauB2|7322
Ophiocordyceps camponoti-floridani Ophcf2|04245
Ophiocordyceps camponoti-rufipedis Ophun1|4995
Ophiocordyceps kimflemingae Ophio5|2405
Ophiocordyceps subramaniannii Hirsu2|2565

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauG2|5240
MSGSGYDAVVDVDDEGDLGHTDLREDLEFHNSNFDEAATNNRKGGASSGLPPPATASNPSSSSKRFLWTISFYAQ
FFDVDTSAVLARCWASLFPRANFLDVLEGNPDLYGPFWIATTVVLILFLGGTISQYLSMTKSTPFAYDFRLLSGA
AGLVYGYTLFIPVILFLALRYFGSDTANLLECWALYGYSNLIWIPVAVISWSPIEILNWVFVGIGFGMSVAFLVR
NLYPVLSATDRQVSKALLIMVVVLHAGLSLTIKILFFAHGSPVARAPGQGGPDKAAGDGGPERL*
Coding >OphauG2|5240
ATGTCTGGGTCTGGCTACGATGCCGTGGTGGATGTGGACGACGAGGGCGATCTAGGACACACGGATCTCCGAGAG
GACCTTGAATTCCACAACTCCAACTTTGACGAAGCGGCGACGAACAACCGCAAAGGCGGAGCATCGTCTGGGCTC
CCTCCGCCAGCGACAGCTTCCAACCCATCCTCCTCGTCGAAGCGGTTTCTCTGGACCATTTCCTTTTACGCGCAA
TTCTTCGATGTGGACACGTCTGCGGTGCTGGCGCGGTGCTGGGCGTCTCTGTTCCCGCGGGCAAACTTTCTCGAC
GTGCTGGAGGGGAATCCCGACCTGTACGGACCGTTTTGGATCGCGACAACGGTCGTCTTGATTCTCTTTTTAGGC
GGGACTATAAGCCAGTACCTGTCCATGACCAAGTCGACGCCGTTTGCGTATGATTTTAGATTGTTGAGCGGAGCG
GCTGGCTTGGTCTATGGGTACACGCTCTTCATACCCGTCATTCTCTTCCTTGCCCTGAGGTATTTCGGCAGCGAC
ACGGCAAACCTGCTCGAGTGCTGGGCTCTCTACGGCTACTCAAACCTCATTTGGATCCCGGTGGCCGTGATTAGC
TGGTCGCCGATTGAAATCCTCAACTGGGTCTTTGTCGGGATTGGGTTTGGCATGTCGGTGGCGTTTTTGGTGCGC
AATCTCTACCCAGTCTTGAGCGCCACGGATCGCCAGGTCAGCAAGGCACTGCTCATCATGGTTGTCGTGCTGCAC
GCCGGCCTCTCTCTAACCATTAAGATTCTCTTTTTTGCCCATGGGAGCCCTGTGGCGAGGGCGCCGGGCCAAGGC
GGGCCAGACAAGGCGGCTGGGGACGGGGGCCCAGAAAGATTGTAA
Transcript >OphauG2|5240
ATGTCTGGGTCTGGCTACGATGCCGTGGTGGATGTGGACGACGAGGGCGATCTAGGACACACGGATCTCCGAGAG
GACCTTGAATTCCACAACTCCAACTTTGACGAAGCGGCGACGAACAACCGCAAAGGCGGAGCATCGTCTGGGCTC
CCTCCGCCAGCGACAGCTTCCAACCCATCCTCCTCGTCGAAGCGGTTTCTCTGGACCATTTCCTTTTACGCGCAA
TTCTTCGATGTGGACACGTCTGCGGTGCTGGCGCGGTGCTGGGCGTCTCTGTTCCCGCGGGCAAACTTTCTCGAC
GTGCTGGAGGGGAATCCCGACCTGTACGGACCGTTTTGGATCGCGACAACGGTCGTCTTGATTCTCTTTTTAGGC
GGGACTATAAGCCAGTACCTGTCCATGACCAAGTCGACGCCGTTTGCGTATGATTTTAGATTGTTGAGCGGAGCG
GCTGGCTTGGTCTATGGGTACACGCTCTTCATACCCGTCATTCTCTTCCTTGCCCTGAGGTATTTCGGCAGCGAC
ACGGCAAACCTGCTCGAGTGCTGGGCTCTCTACGGCTACTCAAACCTCATTTGGATCCCGGTGGCCGTGATTAGC
TGGTCGCCGATTGAAATCCTCAACTGGGTCTTTGTCGGGATTGGGTTTGGCATGTCGGTGGCGTTTTTGGTGCGC
AATCTCTACCCAGTCTTGAGCGCCACGGATCGCCAGGTCAGCAAGGCACTGCTCATCATGGTTGTCGTGCTGCAC
GCCGGCCTCTCTCTAACCATTAAGATTCTCTTTTTTGCCCATGGGAGCCCTGTGGCGAGGGCGCCGGGCCAAGGC
GGGCCAGACAAGGCGGCTGGGGACGGGGGCCCAGAAAGATTGTAA
Gene >OphauG2|5240
ATGTCTGGGTCTGGCTACGATGCCGTGGTGGATGTGGACGACGAGGTTGGCGGATGATTTTGAGTAAAGGCTGAA
TCGACGGCTTGGCTGACATTGTTGGACACATTAGGGCGATCTAGGACACACGGATCTCCGAGAGGACCTTGAATT
CCACAACTCCAACTTTGACGAAGCGGCGACGAACAACCGCAAAGGCGGAGCATCGTCTGGGCTCCCTCCGCCAGC
GACAGCTTCCAACCCATCCTCCTCGTCGAAGCGGTTTCTCTGGACCATTTCCTTTTACGCGCAATTCTTCGATGT
GGACACGTCTGCGGTGCTGGCGCGGTGCTGGGCGTCTCTGTTCCCGCGGGCAAACTTTCTCGACGTGCTGGAGGG
GAATCCCGACCTGTACGGACCGTTTTGGATCGCGACAACGGTCGTCTTGATTCTCTTTTTAGGCGGGACTATAAG
CCAGTACCTGTCCATGACCAAGTCGACGCCGTTTGCGTATGATTTTAGATTGTTGAGCGGTAAGTGGGCTTGTGT
TCTTTTTTTGGCAAGGACCGAAAACAAAAAGGCTAACAAGTCTTGGGGGGGAAATAAAAAGGAGCGGCTGGCTTG
GTCTATGGGTACACGCTCTTCATACCCGTCATTCTCTTCCTTGCCCTGAGGTATTTCGGCAGCGACACGGCAAAC
CTGCTCGAGTGCTGGGCTCTCTACGGCTACTCAAACCTCATTTGGATCCCGGTGGCCGTGATTAGCTGGTCGCCG
ATTGAAATCCTCAACTGGGTCTTTGTCGGGATTGGGTTTGGCATGTCGGTGGCGTTTTTGGTGCGCAATCTCTAC
CCAGTCTTGAGCGCCACGGATCGCCAGGTCAGCAAGGCACTGCTCATCATGGTTGTCGTGCTGCACGCCGGCCTC
TCTCTAACCATTAAGATTCTCTTTTTTGCCCATGGGAGCCCTGTGGCGAGGGCGCCGGGCCAAGGCGGGCCAGAC
AAGGCGGCTGGGGACGGGGGCCCAGAAAGATTGTAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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