Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauG2|5240
Gene name
LocationContig_473:3760..4771
Strand-
Gene length (bp)1011
Transcript length (bp)870
Coding sequence length (bp)870
Protein length (aa) 290

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04893 Yip1 Yip1 domain 3.2E-14 93 252

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|Q9UTD3|YIP5_SCHPO Protein YIP5 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=yip5 PE=3 SV=1 10 263 3.0E-43
sp|Q9Y548|YIPF1_HUMAN Protein YIPF1 OS=Homo sapiens GN=YIPF1 PE=1 SV=1 67 262 9.0E-31
sp|Q5RBL0|YIPF1_PONAB Protein YIPF1 OS=Pongo abelii GN=YIPF1 PE=2 SV=1 67 262 3.0E-30
sp|Q6P6G5|YIPF1_RAT Protein YIPF1 OS=Rattus norvegicus GN=Yipf1 PE=2 SV=1 67 262 3.0E-30
sp|Q91VU1|YIPF1_MOUSE Protein YIPF1 OS=Mus musculus GN=Yipf1 PE=2 SV=1 67 262 3.0E-30
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|Q9UTD3|YIP5_SCHPO Protein YIP5 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=yip5 PE=3 SV=1 10 263 3.0E-43
sp|Q9Y548|YIPF1_HUMAN Protein YIPF1 OS=Homo sapiens GN=YIPF1 PE=1 SV=1 67 262 9.0E-31
sp|Q5RBL0|YIPF1_PONAB Protein YIPF1 OS=Pongo abelii GN=YIPF1 PE=2 SV=1 67 262 3.0E-30
sp|Q6P6G5|YIPF1_RAT Protein YIPF1 OS=Rattus norvegicus GN=Yipf1 PE=2 SV=1 67 262 3.0E-30
sp|Q91VU1|YIPF1_MOUSE Protein YIPF1 OS=Mus musculus GN=Yipf1 PE=2 SV=1 67 262 3.0E-30
sp|Q54TS4|YIPF1_DICDI Protein YIPF1 homolog OS=Dictyostelium discoideum GN=yipf1 PE=3 SV=1 53 266 2.0E-27
sp|Q99LP8|YIPF2_MOUSE Protein YIPF2 OS=Mus musculus GN=Yipf2 PE=2 SV=1 60 262 1.0E-25
sp|Q9BWQ6|YIPF2_HUMAN Protein YIPF2 OS=Homo sapiens GN=YIPF2 PE=1 SV=1 67 272 2.0E-25
sp|Q5XIT3|YIPF2_RAT Protein YIPF2 OS=Rattus norvegicus GN=Yipf2 PE=2 SV=1 60 262 1.0E-21
sp|P53108|YIP5_YEAST Protein YIP5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YIP5 PE=1 SV=1 70 262 2.0E-15
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GO

GO Term Description Terminal node
GO:0016020 membrane Yes
GO:0005575 cellular_component No
GO:0110165 cellular anatomical entity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 57 0.45

Transmembrane Domains

Domain # Start End Length
1 110 132 22
2 147 169 22
3 182 201 19
4 206 228 22
5 241 263 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauG2|5240
MSGSGYDAVVDVDDEGDLGHTDLREDLEFHNSNFDEAATNNRKGGASSGLPPPATASNPSSSSKRFLWTISFYAQ
FFDVDTSAVLARCWASLFPRANFLDVLEGNPDLYGPFWIATTVVLILFLGGTISQYLSMTKSTPFAYDFRLLSGA
AGLVYGYTLFIPVILFLALRYFGSDTANLLECWALYGYSNLIWIPVAVISWSPIEILNWVFVGIGFGMSVAFLVR
NLYPVLSATDRQVSKALLIMVVVLHAGLSLTIKILFFAHGSPVARAPGQGGPDKAAGDGGPERL*
Coding >OphauG2|5240
ATGTCTGGGTCTGGCTACGATGCCGTGGTGGATGTGGACGACGAGGGCGATCTAGGACACACGGATCTCCGAGAG
GACCTTGAATTCCACAACTCCAACTTTGACGAAGCGGCGACGAACAACCGCAAAGGCGGAGCATCGTCTGGGCTC
CCTCCGCCAGCGACAGCTTCCAACCCATCCTCCTCGTCGAAGCGGTTTCTCTGGACCATTTCCTTTTACGCGCAA
TTCTTCGATGTGGACACGTCTGCGGTGCTGGCGCGGTGCTGGGCGTCTCTGTTCCCGCGGGCAAACTTTCTCGAC
GTGCTGGAGGGGAATCCCGACCTGTACGGACCGTTTTGGATCGCGACAACGGTCGTCTTGATTCTCTTTTTAGGC
GGGACTATAAGCCAGTACCTGTCCATGACCAAGTCGACGCCGTTTGCGTATGATTTTAGATTGTTGAGCGGAGCG
GCTGGCTTGGTCTATGGGTACACGCTCTTCATACCCGTCATTCTCTTCCTTGCCCTGAGGTATTTCGGCAGCGAC
ACGGCAAACCTGCTCGAGTGCTGGGCTCTCTACGGCTACTCAAACCTCATTTGGATCCCGGTGGCCGTGATTAGC
TGGTCGCCGATTGAAATCCTCAACTGGGTCTTTGTCGGGATTGGGTTTGGCATGTCGGTGGCGTTTTTGGTGCGC
AATCTCTACCCAGTCTTGAGCGCCACGGATCGCCAGGTCAGCAAGGCACTGCTCATCATGGTTGTCGTGCTGCAC
GCCGGCCTCTCTCTAACCATTAAGATTCTCTTTTTTGCCCATGGGAGCCCTGTGGCGAGGGCGCCGGGCCAAGGC
GGGCCAGACAAGGCGGCTGGGGACGGGGGCCCAGAAAGATTGTAA
Transcript >OphauG2|5240
ATGTCTGGGTCTGGCTACGATGCCGTGGTGGATGTGGACGACGAGGGCGATCTAGGACACACGGATCTCCGAGAG
GACCTTGAATTCCACAACTCCAACTTTGACGAAGCGGCGACGAACAACCGCAAAGGCGGAGCATCGTCTGGGCTC
CCTCCGCCAGCGACAGCTTCCAACCCATCCTCCTCGTCGAAGCGGTTTCTCTGGACCATTTCCTTTTACGCGCAA
TTCTTCGATGTGGACACGTCTGCGGTGCTGGCGCGGTGCTGGGCGTCTCTGTTCCCGCGGGCAAACTTTCTCGAC
GTGCTGGAGGGGAATCCCGACCTGTACGGACCGTTTTGGATCGCGACAACGGTCGTCTTGATTCTCTTTTTAGGC
GGGACTATAAGCCAGTACCTGTCCATGACCAAGTCGACGCCGTTTGCGTATGATTTTAGATTGTTGAGCGGAGCG
GCTGGCTTGGTCTATGGGTACACGCTCTTCATACCCGTCATTCTCTTCCTTGCCCTGAGGTATTTCGGCAGCGAC
ACGGCAAACCTGCTCGAGTGCTGGGCTCTCTACGGCTACTCAAACCTCATTTGGATCCCGGTGGCCGTGATTAGC
TGGTCGCCGATTGAAATCCTCAACTGGGTCTTTGTCGGGATTGGGTTTGGCATGTCGGTGGCGTTTTTGGTGCGC
AATCTCTACCCAGTCTTGAGCGCCACGGATCGCCAGGTCAGCAAGGCACTGCTCATCATGGTTGTCGTGCTGCAC
GCCGGCCTCTCTCTAACCATTAAGATTCTCTTTTTTGCCCATGGGAGCCCTGTGGCGAGGGCGCCGGGCCAAGGC
GGGCCAGACAAGGCGGCTGGGGACGGGGGCCCAGAAAGATTGTAA
Gene >OphauG2|5240
ATGTCTGGGTCTGGCTACGATGCCGTGGTGGATGTGGACGACGAGGTTGGCGGATGATTTTGAGTAAAGGCTGAA
TCGACGGCTTGGCTGACATTGTTGGACACATTAGGGCGATCTAGGACACACGGATCTCCGAGAGGACCTTGAATT
CCACAACTCCAACTTTGACGAAGCGGCGACGAACAACCGCAAAGGCGGAGCATCGTCTGGGCTCCCTCCGCCAGC
GACAGCTTCCAACCCATCCTCCTCGTCGAAGCGGTTTCTCTGGACCATTTCCTTTTACGCGCAATTCTTCGATGT
GGACACGTCTGCGGTGCTGGCGCGGTGCTGGGCGTCTCTGTTCCCGCGGGCAAACTTTCTCGACGTGCTGGAGGG
GAATCCCGACCTGTACGGACCGTTTTGGATCGCGACAACGGTCGTCTTGATTCTCTTTTTAGGCGGGACTATAAG
CCAGTACCTGTCCATGACCAAGTCGACGCCGTTTGCGTATGATTTTAGATTGTTGAGCGGTAAGTGGGCTTGTGT
TCTTTTTTTGGCAAGGACCGAAAACAAAAAGGCTAACAAGTCTTGGGGGGGAAATAAAAAGGAGCGGCTGGCTTG
GTCTATGGGTACACGCTCTTCATACCCGTCATTCTCTTCCTTGCCCTGAGGTATTTCGGCAGCGACACGGCAAAC
CTGCTCGAGTGCTGGGCTCTCTACGGCTACTCAAACCTCATTTGGATCCCGGTGGCCGTGATTAGCTGGTCGCCG
ATTGAAATCCTCAACTGGGTCTTTGTCGGGATTGGGTTTGGCATGTCGGTGGCGTTTTTGGTGCGCAATCTCTAC
CCAGTCTTGAGCGCCACGGATCGCCAGGTCAGCAAGGCACTGCTCATCATGGTTGTCGTGCTGCACGCCGGCCTC
TCTCTAACCATTAAGATTCTCTTTTTTGCCCATGGGAGCCCTGTGGCGAGGGCGCCGGGCCAAGGCGGGCCAGAC
AAGGCGGCTGGGGACGGGGGCCCAGAAAGATTGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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