Protein ID | OphauG2|5240 |
Gene name | |
Location | Contig_473:3760..4771 |
Strand | - |
Gene length (bp) | 1011 |
Transcript length (bp) | 870 |
Coding sequence length (bp) | 870 |
Protein length (aa) | 290 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF04893 | Yip1 | Yip1 domain | 3.2E-14 | 93 | 252 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q9UTD3|YIP5_SCHPO | Protein YIP5 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=yip5 PE=3 SV=1 | 10 | 263 | 3.0E-43 |
sp|Q9Y548|YIPF1_HUMAN | Protein YIPF1 OS=Homo sapiens GN=YIPF1 PE=1 SV=1 | 67 | 262 | 9.0E-31 |
sp|Q5RBL0|YIPF1_PONAB | Protein YIPF1 OS=Pongo abelii GN=YIPF1 PE=2 SV=1 | 67 | 262 | 3.0E-30 |
sp|Q6P6G5|YIPF1_RAT | Protein YIPF1 OS=Rattus norvegicus GN=Yipf1 PE=2 SV=1 | 67 | 262 | 3.0E-30 |
sp|Q91VU1|YIPF1_MOUSE | Protein YIPF1 OS=Mus musculus GN=Yipf1 PE=2 SV=1 | 67 | 262 | 3.0E-30 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q9UTD3|YIP5_SCHPO | Protein YIP5 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=yip5 PE=3 SV=1 | 10 | 263 | 3.0E-43 |
sp|Q9Y548|YIPF1_HUMAN | Protein YIPF1 OS=Homo sapiens GN=YIPF1 PE=1 SV=1 | 67 | 262 | 9.0E-31 |
sp|Q5RBL0|YIPF1_PONAB | Protein YIPF1 OS=Pongo abelii GN=YIPF1 PE=2 SV=1 | 67 | 262 | 3.0E-30 |
sp|Q6P6G5|YIPF1_RAT | Protein YIPF1 OS=Rattus norvegicus GN=Yipf1 PE=2 SV=1 | 67 | 262 | 3.0E-30 |
sp|Q91VU1|YIPF1_MOUSE | Protein YIPF1 OS=Mus musculus GN=Yipf1 PE=2 SV=1 | 67 | 262 | 3.0E-30 |
sp|Q54TS4|YIPF1_DICDI | Protein YIPF1 homolog OS=Dictyostelium discoideum GN=yipf1 PE=3 SV=1 | 53 | 266 | 2.0E-27 |
sp|Q99LP8|YIPF2_MOUSE | Protein YIPF2 OS=Mus musculus GN=Yipf2 PE=2 SV=1 | 60 | 262 | 1.0E-25 |
sp|Q9BWQ6|YIPF2_HUMAN | Protein YIPF2 OS=Homo sapiens GN=YIPF2 PE=1 SV=1 | 67 | 272 | 2.0E-25 |
sp|Q5XIT3|YIPF2_RAT | Protein YIPF2 OS=Rattus norvegicus GN=Yipf2 PE=2 SV=1 | 60 | 262 | 1.0E-21 |
sp|P53108|YIP5_YEAST | Protein YIP5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YIP5 PE=1 SV=1 | 70 | 262 | 2.0E-15 |
GO Term | Description | Terminal node |
---|---|---|
GO:0016020 | membrane | Yes |
GO:0005575 | cellular_component | No |
GO:0110165 | cellular anatomical entity | No |
Domain # | Start | End | Length |
---|---|---|---|
1 | 110 | 132 | 22 |
2 | 147 | 169 | 22 |
3 | 182 | 201 | 19 |
4 | 206 | 228 | 22 |
5 | 241 | 263 | 22 |
Orthofinder run ID | 4 |
Orthogroup | 5022 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >OphauG2|5240 MSGSGYDAVVDVDDEGDLGHTDLREDLEFHNSNFDEAATNNRKGGASSGLPPPATASNPSSSSKRFLWTISFYAQ FFDVDTSAVLARCWASLFPRANFLDVLEGNPDLYGPFWIATTVVLILFLGGTISQYLSMTKSTPFAYDFRLLSGA AGLVYGYTLFIPVILFLALRYFGSDTANLLECWALYGYSNLIWIPVAVISWSPIEILNWVFVGIGFGMSVAFLVR NLYPVLSATDRQVSKALLIMVVVLHAGLSLTIKILFFAHGSPVARAPGQGGPDKAAGDGGPERL* |
Coding | >OphauG2|5240 ATGTCTGGGTCTGGCTACGATGCCGTGGTGGATGTGGACGACGAGGGCGATCTAGGACACACGGATCTCCGAGAG GACCTTGAATTCCACAACTCCAACTTTGACGAAGCGGCGACGAACAACCGCAAAGGCGGAGCATCGTCTGGGCTC CCTCCGCCAGCGACAGCTTCCAACCCATCCTCCTCGTCGAAGCGGTTTCTCTGGACCATTTCCTTTTACGCGCAA TTCTTCGATGTGGACACGTCTGCGGTGCTGGCGCGGTGCTGGGCGTCTCTGTTCCCGCGGGCAAACTTTCTCGAC GTGCTGGAGGGGAATCCCGACCTGTACGGACCGTTTTGGATCGCGACAACGGTCGTCTTGATTCTCTTTTTAGGC GGGACTATAAGCCAGTACCTGTCCATGACCAAGTCGACGCCGTTTGCGTATGATTTTAGATTGTTGAGCGGAGCG GCTGGCTTGGTCTATGGGTACACGCTCTTCATACCCGTCATTCTCTTCCTTGCCCTGAGGTATTTCGGCAGCGAC ACGGCAAACCTGCTCGAGTGCTGGGCTCTCTACGGCTACTCAAACCTCATTTGGATCCCGGTGGCCGTGATTAGC TGGTCGCCGATTGAAATCCTCAACTGGGTCTTTGTCGGGATTGGGTTTGGCATGTCGGTGGCGTTTTTGGTGCGC AATCTCTACCCAGTCTTGAGCGCCACGGATCGCCAGGTCAGCAAGGCACTGCTCATCATGGTTGTCGTGCTGCAC GCCGGCCTCTCTCTAACCATTAAGATTCTCTTTTTTGCCCATGGGAGCCCTGTGGCGAGGGCGCCGGGCCAAGGC GGGCCAGACAAGGCGGCTGGGGACGGGGGCCCAGAAAGATTGTAA |
Transcript | >OphauG2|5240 ATGTCTGGGTCTGGCTACGATGCCGTGGTGGATGTGGACGACGAGGGCGATCTAGGACACACGGATCTCCGAGAG GACCTTGAATTCCACAACTCCAACTTTGACGAAGCGGCGACGAACAACCGCAAAGGCGGAGCATCGTCTGGGCTC CCTCCGCCAGCGACAGCTTCCAACCCATCCTCCTCGTCGAAGCGGTTTCTCTGGACCATTTCCTTTTACGCGCAA TTCTTCGATGTGGACACGTCTGCGGTGCTGGCGCGGTGCTGGGCGTCTCTGTTCCCGCGGGCAAACTTTCTCGAC GTGCTGGAGGGGAATCCCGACCTGTACGGACCGTTTTGGATCGCGACAACGGTCGTCTTGATTCTCTTTTTAGGC GGGACTATAAGCCAGTACCTGTCCATGACCAAGTCGACGCCGTTTGCGTATGATTTTAGATTGTTGAGCGGAGCG GCTGGCTTGGTCTATGGGTACACGCTCTTCATACCCGTCATTCTCTTCCTTGCCCTGAGGTATTTCGGCAGCGAC ACGGCAAACCTGCTCGAGTGCTGGGCTCTCTACGGCTACTCAAACCTCATTTGGATCCCGGTGGCCGTGATTAGC TGGTCGCCGATTGAAATCCTCAACTGGGTCTTTGTCGGGATTGGGTTTGGCATGTCGGTGGCGTTTTTGGTGCGC AATCTCTACCCAGTCTTGAGCGCCACGGATCGCCAGGTCAGCAAGGCACTGCTCATCATGGTTGTCGTGCTGCAC GCCGGCCTCTCTCTAACCATTAAGATTCTCTTTTTTGCCCATGGGAGCCCTGTGGCGAGGGCGCCGGGCCAAGGC GGGCCAGACAAGGCGGCTGGGGACGGGGGCCCAGAAAGATTGTAA |
Gene | >OphauG2|5240 ATGTCTGGGTCTGGCTACGATGCCGTGGTGGATGTGGACGACGAGGTTGGCGGATGATTTTGAGTAAAGGCTGAA TCGACGGCTTGGCTGACATTGTTGGACACATTAGGGCGATCTAGGACACACGGATCTCCGAGAGGACCTTGAATT CCACAACTCCAACTTTGACGAAGCGGCGACGAACAACCGCAAAGGCGGAGCATCGTCTGGGCTCCCTCCGCCAGC GACAGCTTCCAACCCATCCTCCTCGTCGAAGCGGTTTCTCTGGACCATTTCCTTTTACGCGCAATTCTTCGATGT GGACACGTCTGCGGTGCTGGCGCGGTGCTGGGCGTCTCTGTTCCCGCGGGCAAACTTTCTCGACGTGCTGGAGGG GAATCCCGACCTGTACGGACCGTTTTGGATCGCGACAACGGTCGTCTTGATTCTCTTTTTAGGCGGGACTATAAG CCAGTACCTGTCCATGACCAAGTCGACGCCGTTTGCGTATGATTTTAGATTGTTGAGCGGTAAGTGGGCTTGTGT TCTTTTTTTGGCAAGGACCGAAAACAAAAAGGCTAACAAGTCTTGGGGGGGAAATAAAAAGGAGCGGCTGGCTTG GTCTATGGGTACACGCTCTTCATACCCGTCATTCTCTTCCTTGCCCTGAGGTATTTCGGCAGCGACACGGCAAAC CTGCTCGAGTGCTGGGCTCTCTACGGCTACTCAAACCTCATTTGGATCCCGGTGGCCGTGATTAGCTGGTCGCCG ATTGAAATCCTCAACTGGGTCTTTGTCGGGATTGGGTTTGGCATGTCGGTGGCGTTTTTGGTGCGCAATCTCTAC CCAGTCTTGAGCGCCACGGATCGCCAGGTCAGCAAGGCACTGCTCATCATGGTTGTCGTGCTGCACGCCGGCCTC TCTCTAACCATTAAGATTCTCTTTTTTGCCCATGGGAGCCCTGTGGCGAGGGCGCCGGGCCAAGGCGGGCCAGAC AAGGCGGCTGGGGACGGGGGCCCAGAAAGATTGTAA |