© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauG2|5225 |
| Gene name | |
| Location | Contig_470:10541..12227 |
| Strand | - |
| Gene length (bp) | 1686 |
| Transcript length (bp) | 1563 |
| Coding sequence length (bp) | 1563 |
| Protein length (aa) | 521 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01694 | Rhomboid | Rhomboid family | 1.2E-32 | 281 | 421 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|C8VCL5|Y0929_EMENI | Uncharacterized rhomboid protein AN10929 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=AN10929 PE=3 SV=1 | 18 | 515 | 1.0E-140 |
| sp|Q8VZ48|RBL6_ARATH | RHOMBOID-like protein 6, mitochondrial OS=Arabidopsis thaliana GN=RBL6 PE=2 SV=1 | 285 | 509 | 4.0E-27 |
| sp|Q0WQX7|RBL1_ARATH | RHOMBOID-like protein 1 OS=Arabidopsis thaliana GN=RBL1 PE=2 SV=1 | 285 | 518 | 2.0E-26 |
| sp|Q6GMF8|RHDF1_DANRE | Inactive rhomboid protein 1 OS=Danio rerio GN=rhbdf1 PE=2 SV=1 | 248 | 511 | 5.0E-26 |
| sp|F4JBM4|RBL4_ARATH | RHOMBOID-like protein 4 OS=Arabidopsis thaliana GN=RBL4 PE=2 SV=1 | 282 | 509 | 2.0E-25 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|C8VCL5|Y0929_EMENI | Uncharacterized rhomboid protein AN10929 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=AN10929 PE=3 SV=1 | 18 | 515 | 1.0E-140 |
| sp|Q8VZ48|RBL6_ARATH | RHOMBOID-like protein 6, mitochondrial OS=Arabidopsis thaliana GN=RBL6 PE=2 SV=1 | 285 | 509 | 4.0E-27 |
| sp|Q0WQX7|RBL1_ARATH | RHOMBOID-like protein 1 OS=Arabidopsis thaliana GN=RBL1 PE=2 SV=1 | 285 | 518 | 2.0E-26 |
| sp|Q6GMF8|RHDF1_DANRE | Inactive rhomboid protein 1 OS=Danio rerio GN=rhbdf1 PE=2 SV=1 | 248 | 511 | 5.0E-26 |
| sp|F4JBM4|RBL4_ARATH | RHOMBOID-like protein 4 OS=Arabidopsis thaliana GN=RBL4 PE=2 SV=1 | 282 | 509 | 2.0E-25 |
| sp|B0VX73|RHDF1_CALJA | Inactive rhomboid protein 1 OS=Callithrix jacchus GN=RHBDF1 PE=3 SV=1 | 281 | 518 | 3.0E-24 |
| sp|B1MT31|RHDF1_CALMO | Inactive rhomboid protein 1 OS=Callicebus moloch GN=RHBDF1 PE=3 SV=1 | 281 | 518 | 3.0E-24 |
| sp|Q96CC6|RHDF1_HUMAN | Inactive rhomboid protein 1 OS=Homo sapiens GN=RHBDF1 PE=1 SV=2 | 281 | 518 | 5.0E-24 |
| sp|A9L8T6|RHDF1_PAPAN | Inactive rhomboid protein 1 OS=Papio anubis GN=RHBDF1 PE=3 SV=1 | 281 | 518 | 6.0E-24 |
| sp|Q6PIX5|RHDF1_MOUSE | Inactive rhomboid protein 1 OS=Mus musculus GN=Rhbdf1 PE=1 SV=2 | 281 | 518 | 6.0E-24 |
| sp|A7YWH9|RHDF1_BOVIN | Inactive rhomboid protein 1 OS=Bos taurus GN=RHBDF1 PE=2 SV=1 | 281 | 518 | 1.0E-23 |
| sp|Q499S9|RHDF1_RAT | Inactive rhomboid protein 1 OS=Rattus norvegicus GN=Rhbdf1 PE=2 SV=1 | 281 | 518 | 3.0E-23 |
| sp|Q9LYP1|RBL3_ARATH | RHOMBOID-like protein 3 OS=Arabidopsis thaliana GN=RBL3 PE=2 SV=1 | 285 | 509 | 6.0E-23 |
| sp|A0JPA1|RHDF2_XENTR | Inactive rhomboid protein 2 OS=Xenopus tropicalis GN=rhbdf2 PE=2 SV=1 | 248 | 517 | 2.0E-22 |
| sp|Q00M95|RHDF2_CANLF | Inactive rhomboid protein 2 OS=Canis lupus familiaris GN=RHBDF2 PE=2 SV=1 | 248 | 517 | 1.0E-21 |
| sp|Q80WQ6|RHDF2_MOUSE | Inactive rhomboid protein 2 OS=Mus musculus GN=Rhbdf2 PE=1 SV=1 | 248 | 517 | 2.0E-21 |
| sp|Q6PJF5|RHDF2_HUMAN | Inactive rhomboid protein 2 OS=Homo sapiens GN=RHBDF2 PE=1 SV=2 | 248 | 517 | 1.0E-20 |
| sp|F4I8K2|RBL8_ARATH | RHOMBOID-like protein 8 OS=Arabidopsis thaliana GN=KOM PE=2 SV=1 | 285 | 509 | 2.0E-17 |
| sp|Q9SSR0|RBL5_ARATH | RHOMBOID-like protein 5 OS=Arabidopsis thaliana GN=RBL5 PE=3 SV=1 | 282 | 423 | 2.0E-15 |
| sp|O82756|RBL7_ARATH | RHOMBOID-like protein 7 OS=Arabidopsis thaliana GN=RBL7 PE=3 SV=1 | 283 | 405 | 7.0E-13 |
| sp|Q695T9|RHBL2_TOXGO | Rhomboid-like protease 2 OS=Toxoplasma gondii GN=ROM2 PE=2 SV=1 | 285 | 416 | 8.0E-11 |
| sp|O75783|RHBL1_HUMAN | Rhomboid-related protein 1 OS=Homo sapiens GN=RHBDL1 PE=2 SV=1 | 285 | 430 | 8.0E-11 |
| sp|P58872|RHBL3_HUMAN | Rhomboid-related protein 3 OS=Homo sapiens GN=RHBDL3 PE=2 SV=1 | 283 | 421 | 1.0E-10 |
| sp|Q76NQ1|RHDF1_DROME | Inactive rhomboid protein 1 OS=Drosophila melanogaster GN=rho-5 PE=2 SV=1 | 280 | 493 | 2.0E-10 |
| sp|Q8VC82|RHBL1_MOUSE | Rhomboid-related protein 1 OS=Mus musculus GN=Rhbdl1 PE=2 SV=1 | 285 | 430 | 3.0E-10 |
| sp|P54493|GLUP_BACSU | Rhomboid protease GluP OS=Bacillus subtilis (strain 168) GN=gluP PE=1 SV=2 | 261 | 411 | 4.0E-10 |
| sp|Q695T8|RHBL4_TOXGO | Rhomboid-like protease 4 OS=Toxoplasma gondii GN=ROM4 PE=2 SV=1 | 285 | 441 | 6.0E-10 |
| sp|P58873|RHBL3_MOUSE | Rhomboid-related protein 3 OS=Mus musculus GN=Rhbdl3 PE=2 SV=1 | 283 | 421 | 1.0E-09 |
| sp|Q6IUY1|RHBL3_TOXGO | Rhomboid-like protease 3 OS=Toxoplasma gondii GN=ROM3 PE=2 SV=1 | 264 | 414 | 4.0E-09 |
| sp|P46116|AARA_PROST | Rhomboid protease AarA OS=Providencia stuartii GN=aarA PE=1 SV=1 | 274 | 426 | 8.0E-09 |
| sp|P20350|RHOM_DROME | Protein rhomboid OS=Drosophila melanogaster GN=rho PE=1 SV=2 | 266 | 419 | 1.0E-08 |
| sp|O88779|RHBL1_RAT | Rhomboid-related protein 1 (Fragment) OS=Rattus norvegicus GN=Rhbdl1 PE=2 SV=1 | 292 | 430 | 6.0E-08 |
| sp|P96617|YDCA_BACSU | Putative rhomboid protease YdcA OS=Bacillus subtilis (strain 168) GN=ydcA PE=3 SV=1 | 280 | 368 | 5.0E-07 |
| sp|Q695U0|RHBL1_TOXGO | Rhomboid-like protease 1 OS=Toxoplasma gondii GN=ROM1 PE=2 SV=1 | 283 | 416 | 9.0E-07 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0004252 | serine-type endopeptidase activity | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0003674 | molecular_function | No |
| GO:0016787 | hydrolase activity | No |
| GO:0004175 | endopeptidase activity | No |
| GO:0003824 | catalytic activity | No |
| GO:0008236 | serine-type peptidase activity | No |
| GO:0017171 | serine hydrolase activity | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0008233 | peptidase activity | No |
| GO:0140096 | catalytic activity, acting on a protein | No |
| GO:0005575 | cellular_component | No |
| GO:0110165 | cellular anatomical entity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 66 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 173 | 195 | 22 |
| 2 | 284 | 306 | 22 |
| 3 | 319 | 341 | 22 |
| 4 | 346 | 368 | 22 |
| 5 | 380 | 399 | 19 |
| 6 | 463 | 485 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauG2|5225 MAANEYYGGHHGAADNNAQPSYYNGAYFDPSGHSTPAPSYQSAYPSSAPSHTPQPYDDHYAAPPRSGLSPFDSVF DDPETASHKKPFAVDSSGSSMAHGDTAYYGSSLPRSTSRSHVAEDIPLQDQIGKNNTFNDHVYDAPDAARATNRS KNKGKVRLGELGMFGANRKRLPFVTYFFTFVQVAVFIGEIVRNGILTGSPIMIKPQFNPMIGPSTQVLINMGARY VPCMHNVKEIQGSNVPVLFLCPNATTNEEFCPLSELCGFGGVPDPVFNNADQKPAPDQWYRFIIPIFMHAGLIHI GFNLLLQMTIGKEMEMAIGPIRFFLVYMSAGIFGFVMGGNFAAPGIASTGASGSLFGIIALTLLDLLYSWKDRRS PVKDLVYLIVDMVISFVLGLLPGLDNFSHIGGFLMGICLGISILHSPNSLRRRLGNDTPYSAVGPDHGAMTSFFK SPLGFFRGRKPLWWAWWLVRVAALVCVITVFIVLVNNFYNVTYTCTWCKYLSCLPVSNWCEIGTIQQQTS* |
| Coding | >OphauG2|5225 ATGGCTGCTAACGAGTACTATGGCGGCCATCATGGCGCTGCCGACAACAATGCTCAGCCTTCCTACTACAACGGT GCATACTTCGATCCCTCGGGACACTCGACACCAGCACCCTCGTATCAGTCGGCATATCCCTCTTCAGCCCCTTCT CATACCCCACAGCCCTATGACGACCACTACGCAGCGCCTCCTCGAAGCGGCCTGTCTCCATTTGATTCCGTCTTT GACGATCCCGAAACTGCCTCCCATAAGAAACCATTCGCCGTCGACAGCAGCGGGAGCAGTATGGCTCATGGGGAC ACAGCCTACTATGGCTCCTCTCTGCCGCGATCAACCTCGCGCTCCCATGTCGCTGAAGATATTCCACTGCAAGAC CAGATTGGCAAAAACAACACCTTCAACGACCATGTTTACGATGCTCCCGACGCTGCCCGAGCCACAAACCGCTCC AAGAACAAAGGCAAGGTTCGACTGGGAGAGCTGGGCATGTTTGGCGCCAACAGGAAGAGGCTTCCATTTGTTACC TACTTCTTCACTTTTGTTCAGGTGGCCGTCTTCATTGGTGAAATAGTCCGAAATGGTATCTTGACGGGCTCACCC ATCATGATTAAACCTCAGTTCAACCCCATGATTGGCCCATCAACCCAAGTCCTTATAAACATGGGCGCCCGCTAC GTTCCCTGCATGCACAATGTCAAGGAGATTCAAGGCTCCAATGTGCCTGTTCTGTTCCTGTGCCCCAACGCGACC ACCAACGAGGAATTTTGCCCACTCTCAGAGCTCTGCGGCTTTGGTGGTGTCCCTGACCCGGTGTTCAACAACGCT GACCAAAAACCCGCCCCCGACCAGTGGTACCGCTTCATCATACCCATCTTCATGCACGCCGGTCTCATCCACATT GGCTTCAATTTGCTGTTGCAAATGACTATTGGTAAGGAGATGGAGATGGCTATTGGTCCTATCCGCTTCTTCCTC GTCTACATGAGTGCTGGCATCTTTGGCTTTGTCATGGGTGGAAATTTTGCTGCTCCAGGAATAGCTTCAACTGGT GCGTCGGGTTCGCTATTTGGCATCATTGCCCTGACTCTACTCGATCTGCTTTACTCTTGGAAGGATCGCCGCAGC CCCGTCAAGGATCTAGTATACCTCATCGTCGATATGGTGATTTCCTTTGTCCTGGGTCTGTTGCCTGGTCTTGAC AACTTCTCACACATAGGCGGCTTCCTCATGGGGATTTGCCTCGGCATCAGCATACTTCATTCGCCCAACTCCCTG AGACGAAGACTGGGCAATGACACACCTTACTCAGCCGTCGGACCGGATCACGGTGCAATGACTTCTTTCTTCAAG AGCCCACTGGGCTTCTTCCGAGGACGCAAGCCCCTGTGGTGGGCATGGTGGCTCGTAAGGGTCGCCGCCCTTGTT TGCGTCATCACTGTCTTCATTGTGCTCGTCAACAACTTTTACAATGTTACATACACATGCACCTGGTGCAAGTAT TTGAGTTGCTTGCCCGTTAGCAATTGGTGTGAAATCGGGACGATCCAACAACAGACCTCTTGA |
| Transcript | >OphauG2|5225 ATGGCTGCTAACGAGTACTATGGCGGCCATCATGGCGCTGCCGACAACAATGCTCAGCCTTCCTACTACAACGGT GCATACTTCGATCCCTCGGGACACTCGACACCAGCACCCTCGTATCAGTCGGCATATCCCTCTTCAGCCCCTTCT CATACCCCACAGCCCTATGACGACCACTACGCAGCGCCTCCTCGAAGCGGCCTGTCTCCATTTGATTCCGTCTTT GACGATCCCGAAACTGCCTCCCATAAGAAACCATTCGCCGTCGACAGCAGCGGGAGCAGTATGGCTCATGGGGAC ACAGCCTACTATGGCTCCTCTCTGCCGCGATCAACCTCGCGCTCCCATGTCGCTGAAGATATTCCACTGCAAGAC CAGATTGGCAAAAACAACACCTTCAACGACCATGTTTACGATGCTCCCGACGCTGCCCGAGCCACAAACCGCTCC AAGAACAAAGGCAAGGTTCGACTGGGAGAGCTGGGCATGTTTGGCGCCAACAGGAAGAGGCTTCCATTTGTTACC TACTTCTTCACTTTTGTTCAGGTGGCCGTCTTCATTGGTGAAATAGTCCGAAATGGTATCTTGACGGGCTCACCC ATCATGATTAAACCTCAGTTCAACCCCATGATTGGCCCATCAACCCAAGTCCTTATAAACATGGGCGCCCGCTAC GTTCCCTGCATGCACAATGTCAAGGAGATTCAAGGCTCCAATGTGCCTGTTCTGTTCCTGTGCCCCAACGCGACC ACCAACGAGGAATTTTGCCCACTCTCAGAGCTCTGCGGCTTTGGTGGTGTCCCTGACCCGGTGTTCAACAACGCT GACCAAAAACCCGCCCCCGACCAGTGGTACCGCTTCATCATACCCATCTTCATGCACGCCGGTCTCATCCACATT GGCTTCAATTTGCTGTTGCAAATGACTATTGGTAAGGAGATGGAGATGGCTATTGGTCCTATCCGCTTCTTCCTC GTCTACATGAGTGCTGGCATCTTTGGCTTTGTCATGGGTGGAAATTTTGCTGCTCCAGGAATAGCTTCAACTGGT GCGTCGGGTTCGCTATTTGGCATCATTGCCCTGACTCTACTCGATCTGCTTTACTCTTGGAAGGATCGCCGCAGC CCCGTCAAGGATCTAGTATACCTCATCGTCGATATGGTGATTTCCTTTGTCCTGGGTCTGTTGCCTGGTCTTGAC AACTTCTCACACATAGGCGGCTTCCTCATGGGGATTTGCCTCGGCATCAGCATACTTCATTCGCCCAACTCCCTG AGACGAAGACTGGGCAATGACACACCTTACTCAGCCGTCGGACCGGATCACGGTGCAATGACTTCTTTCTTCAAG AGCCCACTGGGCTTCTTCCGAGGACGCAAGCCCCTGTGGTGGGCATGGTGGCTCGTAAGGGTCGCCGCCCTTGTT TGCGTCATCACTGTCTTCATTGTGCTCGTCAACAACTTTTACAATGTTACATACACATGCACCTGGTGCAAGTAT TTGAGTTGCTTGCCCGTTAGCAATTGGTGTGAAATCGGGACGATCCAACAACAGACCTCTTGA |
| Gene | >OphauG2|5225 ATGGCTGCTAACGAGTACTATGGCGGCCATCATGGCGCTGCCGACAACAATGCTCAGCCTTCCTACTACAACGGT GCATACTTCGATCCCTCGGGACACTCGACACCAGCACCCTCGTATCAGTCGGCATATCCCTCTTCAGCCCCTTCT CATACCCCACAGCCCTATGACGACCACTACGCAGCGCCTCCTCGAAGCGGCCTGTCTCCATTTGATTCCGTCTTT GACGATCCCGAAACTGCCTCCCATAAGAAACCATTCGCCGTCGACAGCAGCGGGAGCAGTATGGCTCATGGGGAC ACAGCCTACTATGGCTCCTCTCTGCCGCGATCAACCTCGCGCTCCCATGTCGCTGAAGATATTCCACTGCAAGAC CAGATTGGCAAAAACAACACCTTCAACGACCATGTTTACGATGCTCCCGACGCTGCCCGAGCCACAAACCGCTCC AAGAACAAAGGCAAGGTTCGACTGGGAGAGCTGGGCATGTTTGGCGCCAACAGGAAGAGGCTTCCATTTGTTACC TACTTCTTCACTTTTGTTCAGGTGGCCGTCTTCATTGGTGAAATAGTCCGAAATGGTAGGCTGCCATTTTGCCAT CTCGTCATCCATCATCGAGATTTGCTTGCTAACAAGCTCTTCAGGTATCTTGACGGGCTCACCCATCATGATTAA ACCTCAGTTCAACCCCATGATTGGCCCATCAACCCAAGTCCTTATAAACATGGGCGCCCGCTACGTTCCCTGCAT GCACAATGTCAAGGAGATTCAAGGCTCCAATGTGCCTGTTCTGTTCCTGTGCCCCAACGCGACCACCAACGAGGA ATTTTGCCCACTCTCAGAGCTCTGCGGCTTTGGTGGTGTCCCTGACCCGGTGTTCAACAACGCTGACCAAAAACC CGCCCCCGACCAGTGGTACCGCTTCATCATACCCATCTTCATGCACGCCGGTCTCATCCACATTGGCTTCAATTT GCTGTTGCAAATGACTATTGGTAAGGAGATGGAGATGGCTATTGGTCCTATCCGCTTCTTCCTCGTCTACATGAG TGCTGGCATCTTTGGCTTTGTCATGGGTGGAAATTTTGCTGCTCCAGGAATAGCTTCAACTGGTGCGTCGGGTTC GCTATTTGGCATCATTGCCCTGACTCTACTCGATCTGCTTTACTCTTGGAAGGATCGCCGCAGCCCCGTCAAGGA TCTAGTATACCTCATCGTCGATATGGTGATTTCCTTTGTCCTGGGTCTGTTGCCTGGTCTTGACAACTTCTCACA CATAGGCGGCTTCCTCATGGGGATTTGCCTCGGCATCAGCATACTTCATTCGCCCAACTCCCTGAGACGAAGACT GGGCAATGACACACCTTACTCAGCCGTCGGACCGGATCACGGTGCAATGACTTCTTTCTTCAAGAGCCCACTGGG CTTCTTCCGAGGACGCAAGCCCCTGTGGTGGGCATGGTGGCTCGTAAGGGTCGCCGCCCTTGTTTGCGTCATCAC TGTCTTCATTGTGCTCGTCAACAACTTTTACAATGTTACATACACATGCACCTGGTGCAAGTATTTGAGTTGCTT GGTAAGTGCTTGCCATACGCCCATGAACCTACCAGGAGCAAGTTTCTAACGGATACACAGCCCGTTAGCAATTGG TGTGAAATCGGGACGATCCAACAACAGACCTCTTGA |