Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauG2|5197
Gene name
LocationContig_468:8117..10177
Strand+
Gene length (bp)2060
Transcript length (bp)1704
Coding sequence length (bp)1704
Protein length (aa) 568

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04928 PAP_central Poly(A) polymerase central domain 8.7E-111 8 356
PF04926 PAP_RNA-bind Poly(A) polymerase predicted RNA binding domain 9.6E-65 358 533
PF01909 NTP_transf_2 Nucleotidyltransferase domain 1.3E-08 82 164

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q10295|PAP_SCHPO Poly(A) polymerase pla1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pla1 PE=1 SV=1 8 539 0.0E+00
sp|P29468|PAP_YEAST Poly(A) polymerase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PAP1 PE=1 SV=1 1 566 9.0E-171
sp|Q9UW26|PAPA_CANAL Poly(A) polymerase PAPa OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=PAPA PE=3 SV=1 4 548 1.0E-169
sp|O42617|PAP_CANAL Poly(A) polymerase PAPalpha OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=PAPALPHA PE=3 SV=1 5 556 4.0E-165
sp|Q6PCL9|PAPOG_MOUSE Poly(A) polymerase gamma OS=Mus musculus GN=Papolg PE=1 SV=1 8 468 2.0E-122
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Swissprot ID Swissprot Description Start End E-value
sp|Q10295|PAP_SCHPO Poly(A) polymerase pla1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pla1 PE=1 SV=1 8 539 0.0E+00
sp|P29468|PAP_YEAST Poly(A) polymerase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PAP1 PE=1 SV=1 1 566 9.0E-171
sp|Q9UW26|PAPA_CANAL Poly(A) polymerase PAPa OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=PAPA PE=3 SV=1 4 548 1.0E-169
sp|O42617|PAP_CANAL Poly(A) polymerase PAPalpha OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=PAPALPHA PE=3 SV=1 5 556 4.0E-165
sp|Q6PCL9|PAPOG_MOUSE Poly(A) polymerase gamma OS=Mus musculus GN=Papolg PE=1 SV=1 8 468 2.0E-122
sp|Q9BWT3|PAPOG_HUMAN Poly(A) polymerase gamma OS=Homo sapiens GN=PAPOLG PE=1 SV=2 8 468 3.0E-122
sp|Q54J73|PAP_DICDI Poly(A) polymerase OS=Dictyostelium discoideum GN=papA PE=3 SV=1 8 565 7.0E-120
sp|Q9NRJ5|PAPOB_HUMAN Poly(A) polymerase beta OS=Homo sapiens GN=PAPOLB PE=2 SV=1 8 408 8.0E-113
sp|Q9WVP6|PAPOB_MOUSE Poly(A) polymerase beta OS=Mus musculus GN=Papolb PE=1 SV=2 2 468 7.0E-112
sp|Q61183|PAPOA_MOUSE Poly(A) polymerase alpha OS=Mus musculus GN=Papola PE=1 SV=4 2 468 2.0E-111
sp|P51003|PAPOA_HUMAN Poly(A) polymerase alpha OS=Homo sapiens GN=PAPOLA PE=1 SV=4 2 468 5.0E-111
sp|P25500|PAPOA_BOVIN Poly(A) polymerase alpha OS=Bos taurus GN=PAPOLA PE=1 SV=3 2 468 6.0E-111
sp|P51004|PAPO1_XENLA Poly(A) polymerase alpha-A (Fragment) OS=Xenopus laevis GN=papola-a PE=2 SV=1 5 408 1.0E-108
sp|O82312|PAPS2_ARATH Nuclear poly(A) polymerase 2 OS=Arabidopsis thaliana GN=PAPS2 PE=1 SV=2 8 533 1.0E-105
sp|Q8VYW1|PAPS4_ARATH Nuclear poly(A) polymerase 4 OS=Arabidopsis thaliana GN=PAPS4 PE=1 SV=1 8 533 3.0E-105
sp|Q9LMT2|PAPS1_ARATH Nuclear poly(A) polymerase 1 OS=Arabidopsis thaliana GN=PAPS1 PE=1 SV=1 5 543 1.0E-102
sp|P51006|PAPO3_XENLA Poly(A) polymerase type 3 (Fragment) OS=Xenopus laevis PE=2 SV=1 5 366 4.0E-101
sp|Q56XM9|PAPS3_ARATH Nuclear poly(A) polymerase 3 OS=Arabidopsis thaliana GN=PAPS3 PE=1 SV=1 44 399 4.0E-50
sp|P51005|PAPO2_XENLA Poly(A) polymerase alpha-B OS=Xenopus laevis GN=papola-b PE=2 SV=1 243 468 1.0E-43
sp|Q51D88|PAP_ENTHI Poly(A) polymerase OS=Entamoeba histolytica GN=16.t00038 PE=2 SV=1 85 414 1.0E-38
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GO

GO Term Description Terminal node
GO:0016779 nucleotidyltransferase activity Yes
GO:0003723 RNA binding Yes
GO:0004652 polynucleotide adenylyltransferase activity Yes
GO:0043631 RNA polyadenylation Yes
GO:0016740 transferase activity No
GO:0003676 nucleic acid binding No
GO:1901363 heterocyclic compound binding No
GO:0044238 primary metabolic process No
GO:0016772 transferase activity, transferring phosphorus-containing groups No
GO:0008150 biological_process No
GO:0008152 metabolic process No
GO:0009987 cellular process No
GO:0046483 heterocycle metabolic process No
GO:0043170 macromolecule metabolic process No
GO:0005488 binding No
GO:0006807 nitrogen compound metabolic process No
GO:0071704 organic substance metabolic process No
GO:1901360 organic cyclic compound metabolic process No
GO:0090304 nucleic acid metabolic process No
GO:0003674 molecular_function No
GO:0097159 organic cyclic compound binding No
GO:0006139 nucleobase-containing compound metabolic process No
GO:0070566 adenylyltransferase activity No
GO:0044237 cellular metabolic process No
GO:0003824 catalytic activity No
GO:0016070 RNA metabolic process No
GO:0006725 cellular aromatic compound metabolic process No
GO:0034641 cellular nitrogen compound metabolic process No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup5352
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|5197 (this protein)
Ophiocordyceps australis map64 (Brazil) OphauB2|4597
Ophiocordyceps camponoti-floridani Ophcf2|05641
Ophiocordyceps camponoti-rufipedis Ophun1|3045
Ophiocordyceps kimflemingae Ophio5|1936
Ophiocordyceps subramaniannii Hirsu2|5222

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauG2|5197
MPGDQTCGVTPPLSSALPTEGEKRASEALIEELRRQKTFENPSDTQKRHKVLESLQTICDEFVKQVAKSKEPNND
ILIKNARGKVFTYGSFRLGVFGPGSDIDTLIVAPKYVTRDDYFEHFPKMLVNMAPKTAITNLTIVTEAFVPIIKF
EFSGISIDLIFSRIIQKQLSPDLHDLKDSSLLRGLDEPELRSLNGTRVTDEILNLVPEPSTFKLALRAIKLWAQR
RAVYANIMGFPGGVAWAMLVARVCQLYPKAATSVIVNKFFLVMAKWPWPHPVLLKPIENGPLPVRVWNPKVYKGD
SFHLMPVITPAYPSMCSTFNITRSSMTIITRELQRGLELTEAIMMGKRHWSDLFVKHTFFTADYRYYISVTTASK
DKEAHKIWSGYVESKVRMLVQKLELHQSIKLAHPFNKGYDRRHRCQSSDEVARVQEGRLDFLVKSENAETAEINE
GEDQQGTSSIEVFTTTHYIGLQLEDKAKALDLSYQVDEFKSLCTQWKKYQDDLEPLVSIGIQHVRNINLPDDVFD
EGEKKPQKKGATTTLNAKKRGPQEENSQPPAKRPQHSVAAAC*
Coding >OphauG2|5197
ATGCCTGGCGATCAGACTTGTGGCGTTACGCCACCCCTGTCCAGCGCTCTTCCTACTGAAGGCGAGAAGCGAGCT
AGCGAGGCCCTCATTGAAGAGCTGCGTCGGCAAAAAACTTTCGAGAATCCCTCCGATACCCAAAAGCGTCACAAG
GTTCTTGAATCCCTTCAAACCATATGCGACGAGTTCGTTAAGCAAGTGGCCAAGTCCAAGGAGCCAAATAACGAT
ATCCTCATCAAGAATGCCCGCGGAAAGGTCTTCACCTACGGTAGCTTTCGTCTCGGTGTCTTTGGCCCCGGTTCC
GACATTGACACTCTCATTGTCGCACCAAAATATGTCACCAGAGACGATTATTTTGAACATTTTCCAAAGATGCTC
GTCAACATGGCCCCCAAGACTGCAATTACCAATCTGACTATTGTCACCGAAGCCTTTGTTCCAATAATAAAATTC
GAGTTTTCCGGAATTAGCATCGACCTCATTTTTTCACGCATTATACAGAAGCAACTTTCTCCAGACTTGCACGAC
CTCAAAGACTCGTCCCTACTCCGTGGTCTTGACGAGCCCGAACTGCGCTCCTTGAACGGCACGCGCGTAACTGAC
GAAATTCTCAATCTTGTTCCTGAGCCCAGCACCTTTAAGCTTGCGCTTCGGGCAATAAAGCTTTGGGCTCAGCGC
CGCGCCGTATATGCCAATATCATGGGATTTCCCGGTGGTGTTGCCTGGGCCATGCTGGTCGCCCGTGTTTGTCAG
CTTTATCCCAAAGCCGCAACATCTGTCATTGTAAACAAGTTTTTTCTCGTTATGGCCAAGTGGCCATGGCCTCAT
CCCGTCCTTCTTAAGCCCATAGAGAACGGACCCCTCCCAGTCCGAGTTTGGAATCCCAAGGTATATAAGGGAGAT
TCTTTTCATTTAATGCCGGTCATTACCCCGGCTTACCCATCCATGTGTTCCACCTTCAACATCACGCGTTCTTCG
ATGACCATCATTACCAGAGAACTCCAGCGCGGACTGGAGCTAACTGAGGCTATCATGATGGGGAAAAGACACTGG
AGCGATCTTTTTGTCAAACACACCTTTTTCACAGCCGATTATAGATATTATATCTCCGTCACTACTGCCAGCAAG
GATAAGGAAGCCCATAAGATCTGGTCGGGCTATGTCGAATCCAAGGTCCGAATGCTCGTTCAAAAACTCGAATTG
CACCAATCCATCAAGCTGGCGCATCCATTCAACAAAGGTTACGACCGCCGTCACCGCTGCCAAAGCAGTGACGAA
GTGGCACGGGTACAAGAAGGCCGTCTTGACTTTCTCGTAAAGTCTGAAAATGCAGAAACCGCTGAGATCAATGAA
GGTGAAGATCAGCAAGGGACCTCTTCAATAGAAGTCTTTACTACGACCCACTATATTGGCCTACAACTTGAGGAT
AAAGCTAAAGCACTTGATCTATCCTATCAGGTAGACGAATTCAAGTCTCTGTGTACGCAGTGGAAGAAGTATCAA
GACGATTTGGAGCCTTTGGTTTCCATTGGCATCCAGCACGTGCGAAACATAAATCTTCCGGATGATGTTTTCGAT
GAGGGTGAAAAGAAGCCTCAGAAGAAGGGCGCTACCACAACCCTTAACGCCAAAAAGCGTGGCCCACAAGAGGAA
AATTCTCAACCACCTGCAAAACGACCGCAGCATTCAGTGGCAGCCGCGTGTTAA
Transcript >OphauG2|5197
ATGCCTGGCGATCAGACTTGTGGCGTTACGCCACCCCTGTCCAGCGCTCTTCCTACTGAAGGCGAGAAGCGAGCT
AGCGAGGCCCTCATTGAAGAGCTGCGTCGGCAAAAAACTTTCGAGAATCCCTCCGATACCCAAAAGCGTCACAAG
GTTCTTGAATCCCTTCAAACCATATGCGACGAGTTCGTTAAGCAAGTGGCCAAGTCCAAGGAGCCAAATAACGAT
ATCCTCATCAAGAATGCCCGCGGAAAGGTCTTCACCTACGGTAGCTTTCGTCTCGGTGTCTTTGGCCCCGGTTCC
GACATTGACACTCTCATTGTCGCACCAAAATATGTCACCAGAGACGATTATTTTGAACATTTTCCAAAGATGCTC
GTCAACATGGCCCCCAAGACTGCAATTACCAATCTGACTATTGTCACCGAAGCCTTTGTTCCAATAATAAAATTC
GAGTTTTCCGGAATTAGCATCGACCTCATTTTTTCACGCATTATACAGAAGCAACTTTCTCCAGACTTGCACGAC
CTCAAAGACTCGTCCCTACTCCGTGGTCTTGACGAGCCCGAACTGCGCTCCTTGAACGGCACGCGCGTAACTGAC
GAAATTCTCAATCTTGTTCCTGAGCCCAGCACCTTTAAGCTTGCGCTTCGGGCAATAAAGCTTTGGGCTCAGCGC
CGCGCCGTATATGCCAATATCATGGGATTTCCCGGTGGTGTTGCCTGGGCCATGCTGGTCGCCCGTGTTTGTCAG
CTTTATCCCAAAGCCGCAACATCTGTCATTGTAAACAAGTTTTTTCTCGTTATGGCCAAGTGGCCATGGCCTCAT
CCCGTCCTTCTTAAGCCCATAGAGAACGGACCCCTCCCAGTCCGAGTTTGGAATCCCAAGGTATATAAGGGAGAT
TCTTTTCATTTAATGCCGGTCATTACCCCGGCTTACCCATCCATGTGTTCCACCTTCAACATCACGCGTTCTTCG
ATGACCATCATTACCAGAGAACTCCAGCGCGGACTGGAGCTAACTGAGGCTATCATGATGGGGAAAAGACACTGG
AGCGATCTTTTTGTCAAACACACCTTTTTCACAGCCGATTATAGATATTATATCTCCGTCACTACTGCCAGCAAG
GATAAGGAAGCCCATAAGATCTGGTCGGGCTATGTCGAATCCAAGGTCCGAATGCTCGTTCAAAAACTCGAATTG
CACCAATCCATCAAGCTGGCGCATCCATTCAACAAAGGTTACGACCGCCGTCACCGCTGCCAAAGCAGTGACGAA
GTGGCACGGGTACAAGAAGGCCGTCTTGACTTTCTCGTAAAGTCTGAAAATGCAGAAACCGCTGAGATCAATGAA
GGTGAAGATCAGCAAGGGACCTCTTCAATAGAAGTCTTTACTACGACCCACTATATTGGCCTACAACTTGAGGAT
AAAGCTAAAGCACTTGATCTATCCTATCAGGTAGACGAATTCAAGTCTCTGTGTACGCAGTGGAAGAAGTATCAA
GACGATTTGGAGCCTTTGGTTTCCATTGGCATCCAGCACGTGCGAAACATAAATCTTCCGGATGATGTTTTCGAT
GAGGGTGAAAAGAAGCCTCAGAAGAAGGGCGCTACCACAACCCTTAACGCCAAAAAGCGTGGCCCACAAGAGGAA
AATTCTCAACCACCTGCAAAACGACCGCAGCATTCAGTGGCAGCCGCGTGTTAA
Gene >OphauG2|5197
ATGCCTGGCGATCAGACTTGTGGCGTTACGCCACCCCTGTCCAGCGCTCTTCCTACTGAAGGCGAGAAGCGAGCT
AGCGAGGCCCTCATTGAAGAGCTGCGTCGGCAAAAAACTTTCGAGAATCCCTCCGATACCCAAAAGCGGTGCGTT
CATTTTCTCCATGATGCAGGCGCAATACGTTTAATAAACTAATTCGACTTGTCTACAGTCACAAGGTTCTTGAAT
CCCTTCAAACCATATGCGACGAGTTCGTTAAGCAAGTGGCCAAGTCCAAGGAGCCAAATAACGATATCCTCATCA
AGAATGCCCGCGGAAAGGTCTTCACCTACGGTAGCTTTCGTCTCGGTGTCTTTGGCCCCGGTTCCGACATTGACA
CTCTCATTGTCGCACCAAAATATGTCACCAGAGACGATTATTTTGAACATTTTCCAAAGATGCTCGTCAACATGG
CCCCCAAGACTGCAATTACCAATCTGACTATTGTCACCGAAGCCTTTGTTCCAATAATAAAATTCGAGTTTTCCG
GAATTAGCATCGACCTCATTTTTTCACGCATTATACAGAAGCAACTTTCTCCAGACTTGCACGACCTCAAAGACT
CGTCCCTACTCCGTGGTCTTGACGAGCCCGAACTGCGCTCCTTGAACGGCACGCGCGTAACTGACGAAATTCTCA
ATCTTGTTCCTGAGCCCAGCACCTTTAAGCTTGCGCTTCGGGCAATAAAGCTTTGGGCTCAGCGCCGCGCCGTAT
ATGCCAATATCATGGGATTTCCCGGTGGTGTTGCCTGGGCCATGCTGGTCGCCCGTGTTTGTCAGCTTTATCCCA
AAGCCGCAACATCTGTCATTGTAAACAAGTTTTTTCTCGTTATGGCCAAGTGGCCATGGCCTCATCCCGTCCTTC
TTAAGCCCATAGAGAACGGACCCCTCCCAGTCCGAGTTTGGAATCCCAAGGTTTGTCTTTTTGATATGACGCCCC
TGATTTCTATTTGGCTAATGAATAACAATTTGATTAGGTATATAAGGGAGATTCTTTTCATTTAATGCCGGTCAT
TACCCCGGCTTACCCATCCATGTGTTCCACCTTCAACATCACGCGTTCTTCGATGACCATCATTACCAGAGAACT
CCAGCGCGGACTGGAGCTAACTGAGGCTATCATGATGGGGAAAAGACACTGGAGCGATCTTTTTGTCAAACACAC
CTTTTTCACAGCCGATTATAGATATTATATCTCCGTCACTACTGCCAGCAAGGATAAGGAAGCCCATAAGATCTG
GTCGGGCTATGTCGAATCCAAGGTCCGAATGCTCGTTCAAAAACTCGAATTGCACCAATCCATCAAGCTGGCGCA
TCCATTCAACAAAGGTTACGACCGCCGTCACCGCTGCCAAAGCAGTGACGAAGTGGCACGGGTACAAGAAGGCCG
TCTTGACTTTCTCGTAAAGTCTGAAAATGCAGAAACCGCTGAGATCAATGAAGGTGAAGATCAGCAAGGGACCTC
TTCAATAGAAGTCTTTACTACGACCCACTATATTGGCCTACAACTTGAGGATAGTAAGTTGCAAACCCTTGCCTG
GAGCCGTGCCGGCACAGAAAGCCGCGACATGAATTTCCATGCCGCGACGCGACAAGCTGACTTTCCTGTATTAAA
AGAAGCTAAAGCACTTGATCTATCCTATCAGGTAGACGAATTCAAGTCTCTGTGTACGCAGTGGAAGAAGTATCA
AGACGATTTGGAGCCTTTGGTTTCCATTGGCATCCAGCACGTGCGAAAGTGAGTCGACATAAAAAAATCGGATTG
ATATTGCAGATGGAAGACTCATACAGCCATGGTGCCCCCTCAGCATAAATCTTCCGGATGATGTTTTCGATGAGG
GTGAAAAGAAGCCTCAGAAGAAGGGCGCTACCACAACCCTTAACGCCAAAAAGCGTGGCCCACAAGAGGTGACAC
TGATGGACCCAATATACTCATAAGACGCTATCATTCATCTGACACGCACATAGGAAAATTCTCAACCACCTGCAA
AACGACCGCAGCATTCAGTGGCAGCCGCGTGTTAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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