© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauG2|5186 |
| Gene name | |
| Location | Contig_466:1551..2919 |
| Strand | + |
| Gene length (bp) | 1368 |
| Transcript length (bp) | 1302 |
| Coding sequence length (bp) | 1302 |
| Protein length (aa) | 434 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF08426 | ICE2 | ICE2 | 4.1E-150 | 7 | 421 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O13909|YDW1_SCHPO | Uncharacterized protein C23C11.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC23C11.01 PE=4 SV=1 | 13 | 433 | 6.0E-54 |
| sp|P40499|ICE2_YEAST | Protein ICE2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ICE2 PE=1 SV=1 | 18 | 420 | 2.0E-40 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 21 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 7 | 29 | 22 |
| 2 | 33 | 55 | 22 |
| 3 | 67 | 89 | 22 |
| 4 | 138 | 155 | 17 |
| 5 | 175 | 197 | 22 |
| 6 | 207 | 226 | 19 |
| 7 | 233 | 250 | 17 |
| 8 | 303 | 325 | 22 |
| 9 | 359 | 381 | 22 |
| 10 | 401 | 423 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauG2|5186 MWWIISILFSFVFLCSIVLSIPVAFDVGGRDSGLAYSLSLFIYYMLYSAICILTLETTRLGRAVSALLRLSQWLV IPFLMIWALSQFAVDAGSSTSWVERTLGSIWHSKNTSWTEWVFGRDGVLETLMLGSWDNTLRYAGPVFQLLEGFC TLLVIQATGQITRWLVNRGRSDTWVIVFLAFSGSIIASAVYFLWRVAQFPQISNLDATLIGITMTTAVFLCAYGI GSGRGSPVEGSLLFAYVVLCVYQIFTDYLPSDGMGQAESGNVVQPQLPPLPPIIMASYSTLVHILASLPLAMRSS LTFLYAAFQTITPSVIISLAYRLFVFYSATRIIPSVRDLGVRAMMEEPDFEESETANKLLGILSWFSPSILVAVY TSLLLQHFSTNDGPDGWSLRGGDVGGGTWRWINVGLTMGLYGVELYLSRDGQEHWKVD* |
| Coding | >OphauG2|5186 ATGTGGTGGATAATAAGCATTCTCTTCAGCTTCGTCTTTCTCTGCAGCATCGTCCTCTCAATCCCCGTCGCCTTT GATGTCGGCGGCCGCGACAGCGGGCTGGCTTATAGCCTCTCGCTCTTCATCTACTACATGTTGTACTCGGCCATT TGCATATTAACGCTCGAAACGACGCGCCTTGGGCGGGCAGTCTCTGCTCTGCTCCGCCTGTCGCAATGGCTCGTC ATTCCCTTCCTCATGATTTGGGCCCTGAGCCAATTCGCCGTTGATGCTGGTAGCTCGACAAGCTGGGTGGAAAGG ACGCTGGGTAGCATCTGGCACTCCAAAAACACAAGCTGGACCGAATGGGTCTTTGGTCGAGACGGGGTCCTCGAG ACTCTGATGCTGGGCAGCTGGGATAATACCTTGAGATATGCCGGTCCCGTCTTCCAGCTGCTCGAGGGCTTTTGC ACCTTGTTAGTCATTCAAGCCACGGGACAAATAACGCGCTGGCTCGTCAATAGGGGACGCAGCGACACTTGGGTG ATTGTCTTTCTCGCCTTTTCCGGCTCCATTATTGCCAGCGCCGTTTACTTTTTGTGGCGCGTCGCCCAGTTTCCT CAAATCAGTAACCTAGACGCCACTCTTATTGGCATCACCATGACCACGGCCGTCTTTCTCTGCGCATACGGAATT GGCAGCGGCCGTGGCAGCCCGGTCGAGGGCTCACTGCTGTTTGCCTATGTGGTGCTCTGTGTCTACCAAATCTTT ACCGACTACCTGCCCTCGGATGGCATGGGCCAGGCCGAGAGTGGGAACGTGGTTCAGCCACAGCTGCCGCCCCTA CCCCCGATCATCATGGCGTCCTACTCGACTCTGGTCCATATACTTGCGTCACTGCCACTGGCGATGCGATCCTCT CTGACCTTTCTCTACGCGGCTTTCCAGACCATTACGCCTTCAGTCATTATATCGCTGGCGTATCGTCTCTTTGTC TTTTACTCGGCCACACGCATAATCCCATCAGTACGCGATCTTGGCGTCCGCGCCATGATGGAGGAGCCTGATTTT GAAGAATCGGAAACGGCCAACAAGTTGCTGGGAATCCTGAGCTGGTTCTCGCCGTCTATCCTTGTAGCGGTGTAT ACAAGTCTCTTATTACAGCACTTTTCCACCAATGACGGGCCTGATGGCTGGTCGCTCCGAGGCGGCGACGTTGGT GGCGGCACTTGGCGCTGGATCAATGTCGGACTGACCATGGGTCTGTATGGAGTCGAGCTCTATTTAAGCAGAGAC GGTCAGGAGCACTGGAAGGTGGACTAA |
| Transcript | >OphauG2|5186 ATGTGGTGGATAATAAGCATTCTCTTCAGCTTCGTCTTTCTCTGCAGCATCGTCCTCTCAATCCCCGTCGCCTTT GATGTCGGCGGCCGCGACAGCGGGCTGGCTTATAGCCTCTCGCTCTTCATCTACTACATGTTGTACTCGGCCATT TGCATATTAACGCTCGAAACGACGCGCCTTGGGCGGGCAGTCTCTGCTCTGCTCCGCCTGTCGCAATGGCTCGTC ATTCCCTTCCTCATGATTTGGGCCCTGAGCCAATTCGCCGTTGATGCTGGTAGCTCGACAAGCTGGGTGGAAAGG ACGCTGGGTAGCATCTGGCACTCCAAAAACACAAGCTGGACCGAATGGGTCTTTGGTCGAGACGGGGTCCTCGAG ACTCTGATGCTGGGCAGCTGGGATAATACCTTGAGATATGCCGGTCCCGTCTTCCAGCTGCTCGAGGGCTTTTGC ACCTTGTTAGTCATTCAAGCCACGGGACAAATAACGCGCTGGCTCGTCAATAGGGGACGCAGCGACACTTGGGTG ATTGTCTTTCTCGCCTTTTCCGGCTCCATTATTGCCAGCGCCGTTTACTTTTTGTGGCGCGTCGCCCAGTTTCCT CAAATCAGTAACCTAGACGCCACTCTTATTGGCATCACCATGACCACGGCCGTCTTTCTCTGCGCATACGGAATT GGCAGCGGCCGTGGCAGCCCGGTCGAGGGCTCACTGCTGTTTGCCTATGTGGTGCTCTGTGTCTACCAAATCTTT ACCGACTACCTGCCCTCGGATGGCATGGGCCAGGCCGAGAGTGGGAACGTGGTTCAGCCACAGCTGCCGCCCCTA CCCCCGATCATCATGGCGTCCTACTCGACTCTGGTCCATATACTTGCGTCACTGCCACTGGCGATGCGATCCTCT CTGACCTTTCTCTACGCGGCTTTCCAGACCATTACGCCTTCAGTCATTATATCGCTGGCGTATCGTCTCTTTGTC TTTTACTCGGCCACACGCATAATCCCATCAGTACGCGATCTTGGCGTCCGCGCCATGATGGAGGAGCCTGATTTT GAAGAATCGGAAACGGCCAACAAGTTGCTGGGAATCCTGAGCTGGTTCTCGCCGTCTATCCTTGTAGCGGTGTAT ACAAGTCTCTTATTACAGCACTTTTCCACCAATGACGGGCCTGATGGCTGGTCGCTCCGAGGCGGCGACGTTGGT GGCGGCACTTGGCGCTGGATCAATGTCGGACTGACCATGGGTCTGTATGGAGTCGAGCTCTATTTAAGCAGAGAC GGTCAGGAGCACTGGAAGGTGGACTAA |
| Gene | >OphauG2|5186 ATGTGGTGGATAATAAGCATTCTCTTCAGCTTCGTCTTTCTCTGCAGCATCGTCCTCTCAATCCCCGTCGCCTTT GATGTCGGCGGCCGCGACAGCGGGCTGGCTTATAGCCTCTCGCTCTTCATCTACTACATGTTGTACTCGGCCATT TGCATATTAACGCTCGAAACGACGCGCCTTGGGCGGGCAGTCTCTGCTCTGCTCCGCCTGTCGCAATGGCTCGTC ATTCCCTTCCTCATGATTTGGGCCCTGAGCCAATTCGCCGTTGATGCTGGTAGCTCGACAAGCTGGGTGGAAAGG ACGCTGGGTAGCATCTGGCACTCCAAAAACACAAGCTGGACCGAATGGGTCTTTGGTCGAGACGGGGTCCTCGAG ACTCTGATGCTGGGCAGCTGGGATAATACCTTGAGATATGCCGGTCCCGTCTTCCAGCTGCTCGAGGGCTTTTGC ACCTTGTTAGTCATTCAAGCCACGGGACAAATAACGCGCTGGCTCGTCAATAGGGGACGCAGCGACACTTGGGTG GTATGTCAATGCCGTCGGTTGGGCAACGCAGCGTCTTTGCCAAGTCGGGCGACTTACCGTGTCTAGATTGTCTTT CTCGCCTTTTCCGGCTCCATTATTGCCAGCGCCGTTTACTTTTTGTGGCGCGTCGCCCAGTTTCCTCAAATCAGT AACCTAGACGCCACTCTTATTGGCATCACCATGACCACGGCCGTCTTTCTCTGCGCATACGGAATTGGCAGCGGC CGTGGCAGCCCGGTCGAGGGCTCACTGCTGTTTGCCTATGTGGTGCTCTGTGTCTACCAAATCTTTACCGACTAC CTGCCCTCGGATGGCATGGGCCAGGCCGAGAGTGGGAACGTGGTTCAGCCACAGCTGCCGCCCCTACCCCCGATC ATCATGGCGTCCTACTCGACTCTGGTCCATATACTTGCGTCACTGCCACTGGCGATGCGATCCTCTCTGACCTTT CTCTACGCGGCTTTCCAGACCATTACGCCTTCAGTCATTATATCGCTGGCGTATCGTCTCTTTGTCTTTTACTCG GCCACACGCATAATCCCATCAGTACGCGATCTTGGCGTCCGCGCCATGATGGAGGAGCCTGATTTTGAAGAATCG GAAACGGCCAACAAGTTGCTGGGAATCCTGAGCTGGTTCTCGCCGTCTATCCTTGTAGCGGTGTATACAAGTCTC TTATTACAGCACTTTTCCACCAATGACGGGCCTGATGGCTGGTCGCTCCGAGGCGGCGACGTTGGTGGCGGCACT TGGCGCTGGATCAATGTCGGACTGACCATGGGTCTGTATGGAGTCGAGCTCTATTTAAGCAGAGACGGTCAGGAG CACTGGAAGGTGGACTAA |