Protein ID | OphauG2|5145 |
Gene name | |
Location | Contig_46:18579..20815 |
Strand | + |
Gene length (bp) | 2236 |
Transcript length (bp) | 1842 |
Coding sequence length (bp) | 1842 |
Protein length (aa) | 614 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF15612 | WHIM1 | WSTF, HB1, Itc1p, MBD9 motif 1 | 3.5E-04 | 164 | 198 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 46 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >OphauG2|5145 MAAGDDSSDLTSLSSLSPALSDDELDMVPQAKSASILNFFPKLSGKPPKDASPPPRKRSPSPAHEYVLADDPSIA FIVMFRNRFSEAFPKSLPHFGPQELERDVVESVPGERVEHFLCALLGLLLNRKQDVKPGHYGRALEDAIASHKTQ WPTVWQTKNPLSGGNTFNSMTPAERLLLLRTLILWTMSSSETVKTLINQSYKQNRHEDDINQPRAVQPWGSDGDK RRYFLIEGQDDSHFRVYRESNPAGTNRTWWSVASDIDQLKALAAKLDTRDGGPKAKKLSHKILQAIPRFEAGEEK RKRREYRQMRKEQFKRPEPGFSLYEGRTRGKRMKYTYSDEEDTLSDSTTNRRSARNTGATTPAAMGPVTTTSGRQ VRAPPRLNMLGEGVASGGGKVEGSATDNEVGPSGRPRRTAAINHGINGWAGNKSRQRASDDSDEESDMEFGDDED EADADAQIVDESDDEDEFDEDEIMADDDLGEQAQSLVVKFSVTPPKLRTVLTHVGQAFNVLPTPETQDEGFIKSS GPETPLAPRDDMPVRESISVAAVSPMHNADMSPTNSGKQRQATPPLQPLDEDARLQMAPAAPSPSLVWRGSPEKA PPQQPTMEVFGRP* |
Coding | >OphauG2|5145 ATGGCCGCAGGCGACGATTCCTCGGACCTGACATCATTGTCGTCGCTGTCGCCGGCGCTGTCGGATGATGAGCTT GACATGGTCCCCCAGGCCAAGTCGGCCAGCATCCTCAACTTCTTCCCAAAGCTATCGGGCAAGCCGCCCAAGGAC GCTTCGCCGCCGCCTCGCAAACGCTCTCCATCGCCAGCGCACGAGTATGTGCTTGCTGACGATCCTAGCATTGCG TTCATTGTCATGTTCCGCAACCGTTTTAGTGAAGCATTTCCCAAATCGCTGCCACATTTTGGTCCGCAAGAACTC GAACGCGACGTGGTGGAATCCGTCCCAGGCGAGCGCGTCGAACACTTTCTCTGTGCACTTCTTGGCTTGCTGCTC AATCGGAAGCAAGATGTCAAGCCTGGGCACTACGGCAGAGCCCTGGAAGACGCCATTGCCTCCCACAAGACTCAA TGGCCGACAGTATGGCAAACCAAGAACCCGCTCTCTGGCGGCAACACGTTCAACTCCATGACCCCGGCCGAACGA CTCCTCCTGCTGCGCACTCTAATTCTGTGGACCATGTCCTCGTCGGAAACAGTCAAGACCTTGATCAATCAATCG TATAAGCAAAACCGCCATGAAGATGATATCAATCAGCCTCGCGCCGTCCAGCCATGGGGCTCTGATGGGGATAAG CGTCGCTACTTCTTAATTGAAGGCCAAGACGACTCGCACTTTCGAGTCTACCGAGAAAGCAACCCTGCCGGTACA AACCGCACTTGGTGGAGTGTAGCTAGCGACATTGATCAACTCAAGGCTCTGGCAGCAAAGCTCGACACCAGAGAC GGTGGCCCCAAGGCGAAAAAACTAAGCCACAAGATTCTCCAAGCTATTCCACGCTTCGAAGCAGGAGAGGAGAAA CGCAAACGCCGCGAGTACCGCCAGATGCGCAAGGAACAATTCAAGCGGCCTGAACCAGGCTTTTCCTTGTACGAG GGGCGCACTCGCGGAAAGCGCATGAAGTACACCTATTCCGACGAAGAGGACACGCTCTCCGACTCGACAACTAAT AGACGCTCCGCTCGCAATACCGGAGCCACCACACCTGCGGCAATGGGCCCAGTCACGACAACAAGCGGTCGCCAA GTCAGAGCCCCGCCGCGGCTCAATATGCTGGGGGAAGGCGTTGCAAGCGGCGGCGGCAAGGTAGAAGGCTCGGCA ACCGACAACGAGGTCGGACCCTCGGGGAGGCCTCGGCGGACTGCGGCTATCAATCATGGAATAAATGGCTGGGCT GGAAATAAGTCCCGACAGAGGGCTTCGGACGATTCCGATGAGGAAAGCGACATGGAATTTGGAGACGACGAAGAC GAAGCTGATGCCGATGCCCAAATCGTGGATGAGTCGGATGATGAAGACGAATTTGATGAGGACGAGATCATGGCA GATGATGACTTGGGGGAGCAAGCCCAGAGTCTGGTGGTGAAGTTCTCGGTGACGCCGCCCAAGCTCCGCACGGTT CTGACACATGTGGGCCAAGCTTTCAATGTACTTCCAACGCCAGAGACACAAGATGAAGGCTTCATCAAGAGCAGC GGCCCTGAGACGCCGTTGGCTCCAAGAGACGACATGCCTGTTCGGGAATCCATTTCGGTCGCCGCCGTGTCGCCT ATGCATAATGCCGACATGAGTCCAACAAACTCTGGCAAGCAGAGACAGGCGACACCGCCGCTGCAGCCATTGGAT GAAGATGCTCGGTTGCAGATGGCGCCGGCAGCTCCCTCCCCGTCTCTTGTCTGGCGGGGAAGTCCAGAGAAAGCA CCTCCTCAGCAGCCCACTATGGAAGTTTTTGGACGTCCTTGA |
Transcript | >OphauG2|5145 ATGGCCGCAGGCGACGATTCCTCGGACCTGACATCATTGTCGTCGCTGTCGCCGGCGCTGTCGGATGATGAGCTT GACATGGTCCCCCAGGCCAAGTCGGCCAGCATCCTCAACTTCTTCCCAAAGCTATCGGGCAAGCCGCCCAAGGAC GCTTCGCCGCCGCCTCGCAAACGCTCTCCATCGCCAGCGCACGAGTATGTGCTTGCTGACGATCCTAGCATTGCG TTCATTGTCATGTTCCGCAACCGTTTTAGTGAAGCATTTCCCAAATCGCTGCCACATTTTGGTCCGCAAGAACTC GAACGCGACGTGGTGGAATCCGTCCCAGGCGAGCGCGTCGAACACTTTCTCTGTGCACTTCTTGGCTTGCTGCTC AATCGGAAGCAAGATGTCAAGCCTGGGCACTACGGCAGAGCCCTGGAAGACGCCATTGCCTCCCACAAGACTCAA TGGCCGACAGTATGGCAAACCAAGAACCCGCTCTCTGGCGGCAACACGTTCAACTCCATGACCCCGGCCGAACGA CTCCTCCTGCTGCGCACTCTAATTCTGTGGACCATGTCCTCGTCGGAAACAGTCAAGACCTTGATCAATCAATCG TATAAGCAAAACCGCCATGAAGATGATATCAATCAGCCTCGCGCCGTCCAGCCATGGGGCTCTGATGGGGATAAG CGTCGCTACTTCTTAATTGAAGGCCAAGACGACTCGCACTTTCGAGTCTACCGAGAAAGCAACCCTGCCGGTACA AACCGCACTTGGTGGAGTGTAGCTAGCGACATTGATCAACTCAAGGCTCTGGCAGCAAAGCTCGACACCAGAGAC GGTGGCCCCAAGGCGAAAAAACTAAGCCACAAGATTCTCCAAGCTATTCCACGCTTCGAAGCAGGAGAGGAGAAA CGCAAACGCCGCGAGTACCGCCAGATGCGCAAGGAACAATTCAAGCGGCCTGAACCAGGCTTTTCCTTGTACGAG GGGCGCACTCGCGGAAAGCGCATGAAGTACACCTATTCCGACGAAGAGGACACGCTCTCCGACTCGACAACTAAT AGACGCTCCGCTCGCAATACCGGAGCCACCACACCTGCGGCAATGGGCCCAGTCACGACAACAAGCGGTCGCCAA GTCAGAGCCCCGCCGCGGCTCAATATGCTGGGGGAAGGCGTTGCAAGCGGCGGCGGCAAGGTAGAAGGCTCGGCA ACCGACAACGAGGTCGGACCCTCGGGGAGGCCTCGGCGGACTGCGGCTATCAATCATGGAATAAATGGCTGGGCT GGAAATAAGTCCCGACAGAGGGCTTCGGACGATTCCGATGAGGAAAGCGACATGGAATTTGGAGACGACGAAGAC GAAGCTGATGCCGATGCCCAAATCGTGGATGAGTCGGATGATGAAGACGAATTTGATGAGGACGAGATCATGGCA GATGATGACTTGGGGGAGCAAGCCCAGAGTCTGGTGGTGAAGTTCTCGGTGACGCCGCCCAAGCTCCGCACGGTT CTGACACATGTGGGCCAAGCTTTCAATGTACTTCCAACGCCAGAGACACAAGATGAAGGCTTCATCAAGAGCAGC GGCCCTGAGACGCCGTTGGCTCCAAGAGACGACATGCCTGTTCGGGAATCCATTTCGGTCGCCGCCGTGTCGCCT ATGCATAATGCCGACATGAGTCCAACAAACTCTGGCAAGCAGAGACAGGCGACACCGCCGCTGCAGCCATTGGAT GAAGATGCTCGGTTGCAGATGGCGCCGGCAGCTCCCTCCCCGTCTCTTGTCTGGCGGGGAAGTCCAGAGAAAGCA CCTCCTCAGCAGCCCACTATGGAAGTTTTTGGACGTCCTTGA |
Gene | >OphauG2|5145 ATGGCCGCAGGCGACGATTCCTCGGACCTGACATCATTGTCGTCGCTGTCGCCGGCGCTGTCGGATGATGAGCTT GACATGGTCCCCCAGGCCAAGTCGGCCAGCATCCTCAACTTCTTCCCAAAGCTATCGGGCAAGCCGCCCAAGGAC GCTTCGCCGCCGCCTCGCAAACGCTCTCCATCGCCAGCGCACGAGTATGTGCTTGCTGACGATCCTAGCATTGCG GTACGTGCACGATTGATGGCCCAGACTTGCATGGCAATCAGTCTGGGTCTTGTTGAAAATTTGTCTCCCCCCCGG CTTCGCCTCTTCTGTGTGGCGTCGCCTTGTTGTGTGGCGCGTGCTGGTTGGGTGCGACGCGAGACTTGGTGCGTC CCACGTCATAAGCCCAATGAGCTGACTGGTGCCGCAGTTCATTGTCATGTTCCGCAACCGTTTTAGTGAAGCATT TCCCAAATCGCTGCCACATTTTGGTCCGCAAGAACTCGAACGCGACGTGGTGGAATCCGTCCCAGGCGAGCGCGT CGAACACTTTCTCTGTGCACTTCTTGGCTTGCTGCTCAATCGGAAGCAAGATGTCAAGTAGGTCCATTTGGCTGC GCAACACTGCTCTTGTTCCCTTGCCAGAAACTTACCGACTTGATTTGCAGGCCTGGGCACTACGGCAGAGCCCTG GAAGACGCCATTGCCTCCCACAAGACTCAATGGCCGACAGTATGGCAAACCAAGAACCCGCTCTCTGGCGGCAAC ACGTTCAACTCCATGACCCCGGCCGAACGAGTATGTGCGCGTCTTGTTGCATTGTGATTGCTATTGTTGCTGTGG ATGCGCTGACGCGGCGCTGGCTCAGCTCCTCCTGCTGCGCACTCTAATTCTGTGGACCATGTCCTCGTCGGAAAC AGTCAAGACCTTGATCAATCAATCGTATAAGCAAAACCGCCATGAAGATGATATCAATCAGCCTCGCGCCGTCCA GCCATGGGGCTCTGATGGGGATAAGCGTCGCTACTTCTTAATTGAAGGCCAAGACGACTCGCACTTTCGAGTCTA CCGAGAAAGCAACCCTGCCGGTACAAACCGCACTTGGTGGAGTGTAGCTAGCGACATTGATCAACTCAAGGCTCT GGCAGCAAAGCTCGACACCAGAGACGGTGGCCCCAAGGCGAAAAAACTAAGCCACAAGATTCTCCAAGCTATTCC ACGCTTCGAAGCAGGAGAGGAGGTATGGCTCGGCTCCCATCACACAGCCATCAAGCAACGCCTTGCGGTCAAGAG CTAATACAACATTCAGAAACGCAAACGCCGCGAGTACCGCCAGATGCGCAAGGAACAATTCAAGCGGCCTGAACC AGGCTTTTCCTTGTACGAGGGGCGCACTCGCGGAAAGCGCATGAAGTACACCTATTCCGACGAAGAGGACACGCT CTCCGACTCGACAACTAATAGACGCTCCGCTCGCAATACCGGAGCCACCACACCTGCGGCAATGGGCCCAGTCAC GACAACAAGCGGTCGCCAAGTCAGAGCCCCGCCGCGGCTCAATATGCTGGGGGAAGGCGTTGCAAGCGGCGGCGG CAAGGTAGAAGGCTCGGCAACCGACAACGAGGTCGGACCCTCGGGGAGGCCTCGGCGGACTGCGGCTATCAATCA TGGAATAAATGGCTGGGCTGGAAATAAGTCCCGACAGAGGGCTTCGGACGATTCCGATGAGGAAAGCGACATGGA ATTTGGAGACGACGAAGACGAAGCTGATGCCGATGCCCAAATCGTGGATGAGTCGGATGATGAAGACGAATTTGA TGAGGACGAGATCATGGCAGATGATGACTTGGGGGAGCAAGCCCAGAGTCTGGTGGTGAAGTTCTCGGTGACGCC GCCCAAGCTCCGCACGGTTCTGACACATGTGGGCCAAGCTTTCAATGTACTTCCAACGCCAGAGACACAAGATGA AGGCTTCATCAAGAGCAGCGGCCCTGAGACGCCGTTGGCTCCAAGAGACGACATGCCTGTTCGGGAATCCATTTC GGTCGCCGCCGTGTCGCCTATGCATAATGCCGACATGAGTCCAACAAACTCTGGCAAGCAGAGACAGGCGACACC GCCGCTGCAGCCATTGGATGAAGATGCTCGGTTGCAGATGGCGCCGGCAGCTCCCTCCCCGTCTCTTGTCTGGCG GGGAAGTCCAGAGAAAGCACCTCCTCAGCAGCCCACTATGGAAGTTTTTGGACGTCCTTGA |