Fungal Genomics

at Utrecht University

General Properties

Protein ID	OphauG2\|51
Gene name
Location	Contig_10:8243..9093
Strand	+
Gene length (bp)	850
Transcript length (bp)	789
Coding sequence length (bp)	789
Protein length (aa)	263

PFAM Domains

(None)

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q0E7J8\|REV7_SCHPO	DNA polymerase zeta processivity subunit OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rev7 PE=3 SV=1	12	249	8.0E-16
sp\|Q568H3\|MD2L2_DANRE	Mitotic spindle assembly checkpoint protein MAD2B OS=Danio rerio GN=mad2l2 PE=2 SV=1	20	253	7.0E-10
sp\|O14417\|MAD2_SCHPO	Mitotic spindle checkpoint component mad2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mad2 PE=1 SV=1	12	213	2.0E-08
sp\|Q4KWZ6\|MD2L2_CHICK	Mitotic spindle assembly checkpoint protein MAD2B OS=Gallus gallus GN=MAD2L2 PE=1 SV=1	20	249	7.0E-06

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 24	0.5

Transmembrane Domains

Domain #	Start	End	Length
1	10	32	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>OphauG2\|51 MDSATAQLHPTSASTLLSSFSSFLIVAIHLLLRHRNLYPAPTFLLARAYNLPVYQSRHAGVCTWVRDAVAAAMDL VRSGRAQSIAFVVHKASFPALPPPSSSPTKSLASATVVERWVFDLGSFPSDALELTDTHERRSASFVEREPRLPH EVNWPNVQQALRGALRRLSHTAETLHPPTHQDDCTFTLAVEMRHQSSAPIDHPQLWIPSEPHLQPSSPSGASALN HDASTTPIRAVRAGPLFFECYLEQAQQEQHETIPSSL*
Coding	>OphauG2\|51 ATGGACTCGGCCACCGCCCAGCTGCATCCCACCTCGGCCTCCACCCTCCTCTCTTCCTTTTCGTCTTTTCTCATC GTCGCCATCCATTTGCTTCTCCGCCACCGCAATCTCTACCCTGCGCCGACCTTCCTCCTCGCGCGCGCCTACAAT CTCCCCGTCTACCAGTCCCGCCACGCCGGCGTCTGCACCTGGGTCCGCGATGCCGTTGCCGCTGCCATGGATCTG GTCCGCTCTGGCCGTGCACAGTCCATTGCCTTTGTCGTCCACAAGGCCTCCTTTCCTGCTCTGCCGCCCCCTTCG TCGTCGCCCACCAAGAGCCTTGCTTCCGCCACTGTTGTCGAACGCTGGGTCTTTGACCTTGGCTCCTTTCCCTCG GACGCCCTCGAGCTCACAGACACCCATGAGCGCCGCTCTGCATCTTTTGTTGAGCGAGAGCCCCGTCTCCCCCAC GAGGTCAATTGGCCCAATGTCCAACAGGCCCTGCGAGGTGCCTTGCGTCGCCTCTCACATACTGCTGAGACGCTG CACCCTCCAACCCATCAAGACGATTGCACTTTTACCCTGGCTGTCGAGATGCGCCATCAATCCTCGGCCCCCATA GACCATCCACAGCTCTGGATTCCATCTGAGCCACACCTTCAACCCTCCAGCCCTTCTGGTGCCTCTGCACTTAAC CACGACGCTTCAACAACTCCCATTCGCGCTGTTCGCGCAGGACCCCTCTTCTTCGAATGCTACCTTGAGCAAGCT CAACAAGAACAGCATGAAACGATACCATCATCCCTATAG
Transcript	>OphauG2\|51 ATGGACTCGGCCACCGCCCAGCTGCATCCCACCTCGGCCTCCACCCTCCTCTCTTCCTTTTCGTCTTTTCTCATC GTCGCCATCCATTTGCTTCTCCGCCACCGCAATCTCTACCCTGCGCCGACCTTCCTCCTCGCGCGCGCCTACAAT CTCCCCGTCTACCAGTCCCGCCACGCCGGCGTCTGCACCTGGGTCCGCGATGCCGTTGCCGCTGCCATGGATCTG GTCCGCTCTGGCCGTGCACAGTCCATTGCCTTTGTCGTCCACAAGGCCTCCTTTCCTGCTCTGCCGCCCCCTTCG TCGTCGCCCACCAAGAGCCTTGCTTCCGCCACTGTTGTCGAACGCTGGGTCTTTGACCTTGGCTCCTTTCCCTCG GACGCCCTCGAGCTCACAGACACCCATGAGCGCCGCTCTGCATCTTTTGTTGAGCGAGAGCCCCGTCTCCCCCAC GAGGTCAATTGGCCCAATGTCCAACAGGCCCTGCGAGGTGCCTTGCGTCGCCTCTCACATACTGCTGAGACGCTG CACCCTCCAACCCATCAAGACGATTGCACTTTTACCCTGGCTGTCGAGATGCGCCATCAATCCTCGGCCCCCATA GACCATCCACAGCTCTGGATTCCATCTGAGCCACACCTTCAACCCTCCAGCCCTTCTGGTGCCTCTGCACTTAAC CACGACGCTTCAACAACTCCCATTCGCGCTGTTCGCGCAGGACCCCTCTTCTTCGAATGCTACCTTGAGCAAGCT CAACAAGAACAGCATGAAACGATACCATCATCCCTATAG
Gene	>OphauG2\|51 ATGGACTCGGCCACCGCCCAGCTGCATCCCACCTCGGCCTCCACCCTCCTCTCTTCCTTTTCGTCTTTTCTCATC GTCGCCATCCATTTGCTTCTCCGCCACCGCAATCTCTACCCTGCGCCGACCTTCCTCCTCGCGCGCGCCTACAAT CTCCCCGTCTACCAGTCCCGCCACGCCGGCGTCTGCACCTGGGTCCGCGATGCCGTTGCCGCTGCCATGGATCTG GTCCGCTCTGGCCGTGCACAGTCCATTGCCTTTGTCGTCCACAAGGCCTCCTTTCCTGCTCTGCCGCCCCCTTCG TCGTCGCCCACCAAGAGCCTTGCTTCCGCCACTGTTGTCGAACGCTGGGTCTTTGACCTTGGCTCCTTTCCCTCG GACGCCCTCGAGCTCACAGACACCCATGAGCGCCGCTCTGCATCTTTTGTTGAGCGAGAGCCCCGTCTCCCCCAC GAGGTCAATTGGCCCAATGTCCAACAGGCCCTGCGAGGTGCCTTGCGTCGCCTCTCACATACTGCTGAGACGCTG CACCCTCCAACCCATCAAGACGATTGCACTTTTACCCTGGCTGTCGAGATGCGCCATCAATCCTCGGCCCCCATA GACGTATGTGGCCCAAGCCACCCGCCCACCCATCTGCTTGCTAATTGCATCCCACACATTCTAGCATCCACAGCT CTGGATTCCATCTGAGCCACACCTTCAACCCTCCAGCCCTTCTGGTGCCTCTGCACTTAACCACGACGCTTCAAC AACTCCCATTCGCGCTGTTCGCGCAGGACCCCTCTTCTTCGAATGCTACCTTGAGCAAGCTCAACAAGAACAGCA TGAAACGATACCATCATCCCTATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail