© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | OphauG2|5085 |
| Gene name | |
| Location | Contig_450:934..2316 |
| Strand | + |
| Gene length (bp) | 1382 |
| Transcript length (bp) | 963 |
| Coding sequence length (bp) | 963 |
| Protein length (aa) | 321 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 23 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 33 | 55 | 22 |
| 2 | 149 | 171 | 22 |
| 3 | 191 | 213 | 22 |
| 4 | 225 | 247 | 22 |
| 5 | 267 | 289 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauG2|5085 MQNAASHPSPLDLLRPPPGVQPNYIDPPSKAGTLRTLDAVFLTLMLIAVLIRVFVRLRYTKAWGWDDATCALAAI GSTAHTAMHMEGINRGIGRHIWDIPIPWLASAENIRIFEANGINYPFTILFAKLSILLFYLRIFRINNILRALIY ITIFVLTGFYLAIFVLGIVAVAKCGLSFAADPVCHAIQGPLIFINGGFNVATDFYILILPFPLLSALNLRLGQKL GVAAVFACGLAACAASLARLIASALTYHTSDVFWDTATTSMFTTVEMNIVIIVSCVSTFPTFYSKTRVYLQSTTS SIRSRLFASPRGSVNSSEKA* |
| Coding | >OphauG2|5085 ATGCAGAATGCAGCGTCGCACCCCTCTCCGCTTGATCTCCTGAGGCCGCCGCCGGGCGTGCAACCAAACTACATT GATCCACCGTCCAAGGCGGGCACGCTGCGTACTCTTGATGCCGTGTTTCTAACTTTGATGTTGATTGCGGTTTTA ATTCGCGTCTTTGTGCGGCTGAGATATACAAAGGCGTGGGGGTGGGATGATGCTACCTGTGCTTTGGCTGCGATT GGATCCACGGCACATACCGCCATGCACATGGAGGGCATCAATCGTGGTATCGGTAGACATATATGGGATATCCCA ATCCCGTGGCTTGCATCTGCAGAAAACATCAGGATTTTCGAAGCCAATGGCATCAACTACCCCTTTACTATTCTC TTTGCCAAACTATCTATACTCCTTTTTTACCTCCGCATTTTCAGAATCAACAACATCCTGCGTGCACTGATTTAC ATTACCATTTTTGTTCTAACCGGCTTCTACTTGGCCATTTTTGTCCTGGGCATTGTCGCTGTTGCAAAATGCGGC CTGTCATTCGCCGCCGACCCCGTATGCCACGCCATTCAAGGACCTCTTATTTTCATAAATGGCGGCTTCAACGTC GCAACCGACTTTTACATTTTGATCCTGCCCTTTCCCTTACTCTCGGCGCTGAATTTGCGTCTTGGGCAAAAACTA GGCGTCGCTGCCGTCTTTGCATGCGGTCTCGCTGCGTGCGCGGCAAGTTTGGCACGACTTATAGCATCTGCTTTG ACTTACCATACCTCTGATGTCTTCTGGGACACGGCTACGACTTCAATGTTTACAACCGTTGAAATGAACATTGTC ATCATCGTTTCCTGCGTTTCAACCTTTCCAACATTTTACTCCAAAACTAGAGTGTATTTGCAGAGTACTACCAGC AGCATCCGCAGTCGTTTATTCGCGTCACCTAGGGGCTCGGTCAATTCGTCGGAAAAAGCATAA |
| Transcript | >OphauG2|5085 ATGCAGAATGCAGCGTCGCACCCCTCTCCGCTTGATCTCCTGAGGCCGCCGCCGGGCGTGCAACCAAACTACATT GATCCACCGTCCAAGGCGGGCACGCTGCGTACTCTTGATGCCGTGTTTCTAACTTTGATGTTGATTGCGGTTTTA ATTCGCGTCTTTGTGCGGCTGAGATATACAAAGGCGTGGGGGTGGGATGATGCTACCTGTGCTTTGGCTGCGATT GGATCCACGGCACATACCGCCATGCACATGGAGGGCATCAATCGTGGTATCGGTAGACATATATGGGATATCCCA ATCCCGTGGCTTGCATCTGCAGAAAACATCAGGATTTTCGAAGCCAATGGCATCAACTACCCCTTTACTATTCTC TTTGCCAAACTATCTATACTCCTTTTTTACCTCCGCATTTTCAGAATCAACAACATCCTGCGTGCACTGATTTAC ATTACCATTTTTGTTCTAACCGGCTTCTACTTGGCCATTTTTGTCCTGGGCATTGTCGCTGTTGCAAAATGCGGC CTGTCATTCGCCGCCGACCCCGTATGCCACGCCATTCAAGGACCTCTTATTTTCATAAATGGCGGCTTCAACGTC GCAACCGACTTTTACATTTTGATCCTGCCCTTTCCCTTACTCTCGGCGCTGAATTTGCGTCTTGGGCAAAAACTA GGCGTCGCTGCCGTCTTTGCATGCGGTCTCGCTGCGTGCGCGGCAAGTTTGGCACGACTTATAGCATCTGCTTTG ACTTACCATACCTCTGATGTCTTCTGGGACACGGCTACGACTTCAATGTTTACAACCGTTGAAATGAACATTGTC ATCATCGTTTCCTGCGTTTCAACCTTTCCAACATTTTACTCCAAAACTAGAGTGTATTTGCAGAGTACTACCAGC AGCATCCGCAGTCGTTTATTCGCGTCACCTAGGGGCTCGGTCAATTCGTCGGAAAAAGCATAA |
| Gene | >OphauG2|5085 ATGCAGAATGCAGCGTCGCACCCCTCTCCGCTTGATCTCCTGAGGCCGCCGCCGGGCGTGCAACCAAACTACATT GATCCACCGTCCAAGGCGGGCACGCTGCGTACTCTTGATGCCGTGTTTCTAACTTTGATGTTGATTGCGGTTTTA ATTCGCGTCTTTGTGCGGCTGAGATATACAAAGGCGTGGGGGTGGGATGATGGTTGGTTTGTTCCTTTTTGGAAA ACGCGGTTTAAGAATCTCTCGGAGCTGATGTGATTTTTTTTTTTTTGGCGCAACTTTAGCTACCTGTGCTTTGGC TGCGGTAAGCTCTTGTTGCCATTGGCAAAAGCTTCTTGGCATCAACTCATGGGGAATAGATTGGATCCACGGCAC ATACCGCCATGCACATGGAGGGTAAGTCGTCGCTTCTCACAGCTTCGTCAATATCATGTGTTTCAAGGTTGTTTT CAAAGCAAATTAACCGCTATTCTTGGTTAGGCATCAATCGTGGTATCGGTAGACATATATGGGATATCCCAATCC CGTGGCTTGCATCTGCAGAAAACATCAGGGCGAGTAATTAATAAACCTGCTGCCGTTATTGCTCTTGCATCTTCT TACAATGTCTAGATTTTCGAAGCCAATGGCATCAACTACCCCTTTACTATTCTCTTTGCCAAACTATCTATACTC CTTTTTTACCTCCGCATTTTCAGAATCAACAACATCCTGCGTGCACTGATTTACATTACCATTTTTGTTCTAACC GGCTTCTACTTGGCCATTTTTGTCCTGGGCATTGTCGCTGTTGCAAAATGCGGCCTGTCATTCGCCGCCGACCCC GTATGCCACGCCATTCAAGGACCTCTTATTTTCATAAATGGCGGCTTCAACGTCGCAACCGACTTTTACATTTTG ATCCTGCCCTTTCCCTTACTCTCGGCGCTGAATTTGCGTCTTGGGCAAAAACTAGGCGTCGCTGCCGTCTTTGCA TGCGGTCTCGCGTATGCCTTTTATCCTTTTCCCCCCCCCTTGACTTTCAGTTAACCACGAGTTTGGGAATCTGAC GTTTTATTTTGCTACGTTTAGTGCGTGCGCGGCAAGTTTGGCACGACTTATAGCATCTGCTTTGACTTACCATAC CTCTGATGTCTTCTGGGACACGGCTACGACTTCAATGTTTACGTGAGTCAGAAACTAGGCGTTGTGTCGTTTTAT TACTTTGTACTAACAAGTCTAGAACCGTTGAAATGAACATTGTCATCATCGTTTCCTGCGTTTCAACCTTTCCAA CATTTTACTCCAAAACTAGAGTGTATTTGCAGAGTACTACCAGCAGCATCCGCAGTCGTTTATTCGCGTCACCTA GGGGCTCGGTCAATTCGTCGGAAAAAGCATAA |