© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauG2|5072 |
| Gene name | |
| Location | Contig_45:18542..19966 |
| Strand | + |
| Gene length (bp) | 1424 |
| Transcript length (bp) | 1356 |
| Coding sequence length (bp) | 1356 |
| Protein length (aa) | 452 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF04678 | MCU | Mitochondrial calcium uniporter | 3.7E-24 | 254 | 372 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q8VYR0|MCU5_ARATH | Calcium uniporter protein 5, mitochondrial OS=Arabidopsis thaliana GN=At1g57610 PE=2 SV=1 | 264 | 372 | 9.0E-12 |
| sp|F4I111|MCU6_ARATH | Calcium uniporter protein 6, mitochondrial OS=Arabidopsis thaliana GN=At1g09575 PE=2 SV=1 | 260 | 372 | 4.0E-11 |
| sp|Q08BI9|MCU_DANRE | Calcium uniporter protein, mitochondrial OS=Danio rerio GN=mcu PE=2 SV=1 | 257 | 399 | 3.0E-06 |
| sp|Q3UMR5|MCU_MOUSE | Calcium uniporter protein, mitochondrial OS=Mus musculus GN=Mcu PE=1 SV=2 | 257 | 392 | 4.0E-06 |
| sp|Q8NE86|MCU_HUMAN | Calcium uniporter protein, mitochondrial OS=Homo sapiens GN=MCU PE=1 SV=1 | 257 | 392 | 6.0E-06 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 18 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 289 | 308 | 19 |
| 2 | 318 | 337 | 19 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauG2|5072 MRHVLLPSIARLPVLLAGRASGPSLLLNRPITTTVSRRLSNDANDANDAHDLTSNKSAQRKASDRPWMRESSNAL PKATSHDPSGGDASKGRLLTTPTRLLKLILPMPFNPQQEHINASESEKKHWTKSQVEPLALLVHPQQPLSYLERL IQAEIPPLQVNGRERLPDIVFRAEASGQTSNQISKGSNVASYSGLGREGPSNNQARWVRWSSSTEVGDFIRDAAR GREFAINIQGHEPELRVAVPSFGDRTYYMRMRLRRMSRQIDQMSHLKKECDELAHKGAHRLAKGGFAALAGWWAV VYYVTFHTDFGWDLVEPITYLAGLGSIMAGYLWFLFISRDLSYKAAMNLTVSRQQNALYQERGFNPQRWEQLVHE ANQLRHEIRIAASEYDVDWDEMKDLSSQDVKEALAKDRKRNKSNSRDDHQEDHDHQDRDNDGADGPGKKETKASN D* |
| Coding | >OphauG2|5072 ATGAGACATGTCCTGCTGCCCTCGATAGCACGCCTGCCCGTGTTATTGGCTGGCCGGGCATCGGGTCCAAGTCTC CTACTCAACAGACCCATCACCACGACTGTCTCGCGGCGCCTGAGCAATGACGCCAACGACGCCAACGACGCTCAT GATTTGACCTCGAACAAGAGTGCCCAGCGCAAGGCCAGCGACCGTCCATGGATGCGAGAGAGCAGCAATGCTTTG CCCAAGGCTACTTCGCATGATCCTTCGGGAGGTGACGCAAGCAAAGGCCGCCTCCTGACCACGCCCACCAGGCTG CTCAAGCTCATTCTGCCCATGCCATTCAACCCCCAGCAGGAGCACATCAACGCCAGCGAATCCGAAAAGAAACAC TGGACCAAGTCGCAGGTGGAGCCTTTGGCGCTCCTCGTGCACCCTCAACAACCACTGTCATATCTCGAGCGGTTG ATCCAGGCCGAGATTCCCCCGCTTCAAGTCAATGGCCGCGAAAGGCTGCCCGACATTGTCTTCAGAGCCGAGGCC TCGGGCCAGACAAGCAACCAAATTTCAAAAGGTAGCAACGTGGCCTCATACTCGGGTCTTGGGCGCGAAGGCCCC AGCAACAATCAAGCACGCTGGGTACGATGGAGCAGCAGCACTGAAGTGGGCGACTTTATTCGAGACGCAGCACGC GGGCGCGAATTTGCCATCAACATCCAAGGCCATGAGCCAGAGCTGCGGGTGGCGGTGCCGAGCTTCGGTGACCGG ACATACTACATGCGCATGCGACTCCGGCGCATGTCTCGCCAAATCGACCAAATGTCCCATCTCAAGAAGGAATGC GATGAGCTGGCTCACAAGGGCGCGCACCGTCTAGCAAAGGGGGGCTTCGCAGCGCTTGCAGGCTGGTGGGCCGTC GTCTACTATGTCACCTTCCACACCGATTTTGGCTGGGATCTGGTAGAGCCCATCACCTATCTGGCGGGACTGGGA AGCATAATGGCTGGCTATCTGTGGTTTCTCTTCATCAGCCGCGATCTAAGCTACAAGGCGGCCATGAATCTTACC GTTTCGCGACAGCAAAATGCCCTCTATCAGGAACGTGGCTTCAACCCGCAACGATGGGAACAGCTCGTACACGAA GCCAACCAGTTGCGTCACGAGATACGCATCGCGGCAAGCGAGTACGATGTGGACTGGGATGAGATGAAGGACCTC AGTAGCCAAGACGTCAAGGAGGCTCTAGCAAAAGACAGGAAGCGCAACAAGAGCAACTCTCGCGACGACCATCAA GAGGACCATGACCATCAAGACCGCGATAACGATGGAGCTGATGGGCCTGGGAAGAAGGAGACCAAAGCAAGCAAT GATTAG |
| Transcript | >OphauG2|5072 ATGAGACATGTCCTGCTGCCCTCGATAGCACGCCTGCCCGTGTTATTGGCTGGCCGGGCATCGGGTCCAAGTCTC CTACTCAACAGACCCATCACCACGACTGTCTCGCGGCGCCTGAGCAATGACGCCAACGACGCCAACGACGCTCAT GATTTGACCTCGAACAAGAGTGCCCAGCGCAAGGCCAGCGACCGTCCATGGATGCGAGAGAGCAGCAATGCTTTG CCCAAGGCTACTTCGCATGATCCTTCGGGAGGTGACGCAAGCAAAGGCCGCCTCCTGACCACGCCCACCAGGCTG CTCAAGCTCATTCTGCCCATGCCATTCAACCCCCAGCAGGAGCACATCAACGCCAGCGAATCCGAAAAGAAACAC TGGACCAAGTCGCAGGTGGAGCCTTTGGCGCTCCTCGTGCACCCTCAACAACCACTGTCATATCTCGAGCGGTTG ATCCAGGCCGAGATTCCCCCGCTTCAAGTCAATGGCCGCGAAAGGCTGCCCGACATTGTCTTCAGAGCCGAGGCC TCGGGCCAGACAAGCAACCAAATTTCAAAAGGTAGCAACGTGGCCTCATACTCGGGTCTTGGGCGCGAAGGCCCC AGCAACAATCAAGCACGCTGGGTACGATGGAGCAGCAGCACTGAAGTGGGCGACTTTATTCGAGACGCAGCACGC GGGCGCGAATTTGCCATCAACATCCAAGGCCATGAGCCAGAGCTGCGGGTGGCGGTGCCGAGCTTCGGTGACCGG ACATACTACATGCGCATGCGACTCCGGCGCATGTCTCGCCAAATCGACCAAATGTCCCATCTCAAGAAGGAATGC GATGAGCTGGCTCACAAGGGCGCGCACCGTCTAGCAAAGGGGGGCTTCGCAGCGCTTGCAGGCTGGTGGGCCGTC GTCTACTATGTCACCTTCCACACCGATTTTGGCTGGGATCTGGTAGAGCCCATCACCTATCTGGCGGGACTGGGA AGCATAATGGCTGGCTATCTGTGGTTTCTCTTCATCAGCCGCGATCTAAGCTACAAGGCGGCCATGAATCTTACC GTTTCGCGACAGCAAAATGCCCTCTATCAGGAACGTGGCTTCAACCCGCAACGATGGGAACAGCTCGTACACGAA GCCAACCAGTTGCGTCACGAGATACGCATCGCGGCAAGCGAGTACGATGTGGACTGGGATGAGATGAAGGACCTC AGTAGCCAAGACGTCAAGGAGGCTCTAGCAAAAGACAGGAAGCGCAACAAGAGCAACTCTCGCGACGACCATCAA GAGGACCATGACCATCAAGACCGCGATAACGATGGAGCTGATGGGCCTGGGAAGAAGGAGACCAAAGCAAGCAAT GATTAG |
| Gene | >OphauG2|5072 ATGAGACATGTCCTGCTGCCCTCGATAGCACGCCTGCCCGTGTTATTGGCTGGCCGGGCATCGGGTCCAAGTCTC CTACTCAACAGACCCATCACCACGACTGTCTCGCGGCGCCTGAGCAATGACGCCAACGACGCCAACGACGCTCAT GATTTGACCTCGAACAAGAGTGCCCAGCGCAAGGCCAGCGACCGTCCATGGATGCGAGAGAGCAGCAATGCTTTG CCCAAGGCTACTTCGCATGATCCTTCGGGAGGTGACGCAAGCAAAGGTGCTCCCATTCTACTGCCCGTCTTTGTT CACTTACCCCATGTCAAGCGGCTTACACCTTCATCATAGGCCGCCTCCTGACCACGCCCACCAGGCTGCTCAAGC TCATTCTGCCCATGCCATTCAACCCCCAGCAGGAGCACATCAACGCCAGCGAATCCGAAAAGAAACACTGGACCA AGTCGCAGGTGGAGCCTTTGGCGCTCCTCGTGCACCCTCAACAACCACTGTCATATCTCGAGCGGTTGATCCAGG CCGAGATTCCCCCGCTTCAAGTCAATGGCCGCGAAAGGCTGCCCGACATTGTCTTCAGAGCCGAGGCCTCGGGCC AGACAAGCAACCAAATTTCAAAAGGTAGCAACGTGGCCTCATACTCGGGTCTTGGGCGCGAAGGCCCCAGCAACA ATCAAGCACGCTGGGTACGATGGAGCAGCAGCACTGAAGTGGGCGACTTTATTCGAGACGCAGCACGCGGGCGCG AATTTGCCATCAACATCCAAGGCCATGAGCCAGAGCTGCGGGTGGCGGTGCCGAGCTTCGGTGACCGGACATACT ACATGCGCATGCGACTCCGGCGCATGTCTCGCCAAATCGACCAAATGTCCCATCTCAAGAAGGAATGCGATGAGC TGGCTCACAAGGGCGCGCACCGTCTAGCAAAGGGGGGCTTCGCAGCGCTTGCAGGCTGGTGGGCCGTCGTCTACT ATGTCACCTTCCACACCGATTTTGGCTGGGATCTGGTAGAGCCCATCACCTATCTGGCGGGACTGGGAAGCATAA TGGCTGGCTATCTGTGGTTTCTCTTCATCAGCCGCGATCTAAGCTACAAGGCGGCCATGAATCTTACCGTTTCGC GACAGCAAAATGCCCTCTATCAGGAACGTGGCTTCAACCCGCAACGATGGGAACAGCTCGTACACGAAGCCAACC AGTTGCGTCACGAGATACGCATCGCGGCAAGCGAGTACGATGTGGACTGGGATGAGATGAAGGACCTCAGTAGCC AAGACGTCAAGGAGGCTCTAGCAAAAGACAGGAAGCGCAACAAGAGCAACTCTCGCGACGACCATCAAGAGGACC ATGACCATCAAGACCGCGATAACGATGGAGCTGATGGGCCTGGGAAGAAGGAGACCAAAGCAAGCAATGATTAG |