© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauG2|507 |
| Gene name | |
| Location | Contig_1117:1231..2557 |
| Strand | + |
| Gene length (bp) | 1326 |
| Transcript length (bp) | 1326 |
| Coding sequence length (bp) | 1326 |
| Protein length (aa) | 442 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF08546 | ApbA_C | Ketopantoate reductase PanE/ApbA C terminal | 6.0E-25 | 278 | 421 |
| PF02558 | ApbA | Ketopantoate reductase PanE/ApbA | 2.1E-15 | 55 | 233 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9HDU6|PANE_SCHPO | Probable 2-dehydropantoate 2-reductase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBPB2B2.09c PE=3 SV=1 | 55 | 427 | 2.0E-19 |
| sp|P38787|PANE_YEAST | 2-dehydropantoate 2-reductase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PAN5 PE=1 SV=1 | 55 | 427 | 4.0E-15 |
| sp|Q8ZC51|PANE_YERPE | 2-dehydropantoate 2-reductase OS=Yersinia pestis GN=panE PE=3 SV=1 | 118 | 422 | 2.0E-13 |
| sp|P37402|PANE_SALTY | 2-dehydropantoate 2-reductase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=panE PE=1 SV=2 | 119 | 422 | 9.0E-12 |
| sp|P0A9J5|PANE_SHIFL | 2-dehydropantoate 2-reductase OS=Shigella flexneri GN=panE PE=3 SV=1 | 146 | 422 | 2.0E-11 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9HDU6|PANE_SCHPO | Probable 2-dehydropantoate 2-reductase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBPB2B2.09c PE=3 SV=1 | 55 | 427 | 2.0E-19 |
| sp|P38787|PANE_YEAST | 2-dehydropantoate 2-reductase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PAN5 PE=1 SV=1 | 55 | 427 | 4.0E-15 |
| sp|Q8ZC51|PANE_YERPE | 2-dehydropantoate 2-reductase OS=Yersinia pestis GN=panE PE=3 SV=1 | 118 | 422 | 2.0E-13 |
| sp|P37402|PANE_SALTY | 2-dehydropantoate 2-reductase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=panE PE=1 SV=2 | 119 | 422 | 9.0E-12 |
| sp|P0A9J5|PANE_SHIFL | 2-dehydropantoate 2-reductase OS=Shigella flexneri GN=panE PE=3 SV=1 | 146 | 422 | 2.0E-11 |
| sp|P0A9J4|PANE_ECOLI | 2-dehydropantoate 2-reductase OS=Escherichia coli (strain K12) GN=panE PE=1 SV=1 | 146 | 422 | 2.0E-11 |
| sp|Q8XE72|PANE_ECO57 | 2-dehydropantoate 2-reductase OS=Escherichia coli O157:H7 GN=panE PE=3 SV=1 | 146 | 422 | 7.0E-11 |
| sp|Q8Z8W3|PANE_SALTI | 2-dehydropantoate 2-reductase OS=Salmonella typhi GN=panE PE=3 SV=1 | 119 | 422 | 1.0E-10 |
| sp|Q9KPQ9|PANE_VIBCH | 2-dehydropantoate 2-reductase OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) GN=panE PE=3 SV=1 | 101 | 420 | 4.0E-08 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 42 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauG2|507 MPPRQLQTLANDKWLTQIASHGSPPPRLYAWTAANLSGTGAHNREPRKDNDSRRIHMLGIGNIGRLFASNLASLP DRPPITLILRRPELLAKWYSINCQGIQIVRPGVDGSGNKTSSHKSAFDVECWCETPPPHGPIHHPFPVNKLIVTT KAASALPAVDRLRRYLAPDCAVVMVHNGVSPLWPPHGDEYLEQRYPNGGAPRFFSAVTSHALWSMGDFCSMHVAP GDSVMGPILPAGPNGDIEASSPCPETPSAGQGLMQQIKAAKGLQFRSVAWRELWLLQLDKLVVNTTINPLASVLR CKNGQLFENSHDSVIPLIMDRLLQETCHVIQALVSHPASCPMVGPDGVEPLNQRYTVCQMRDMVCDIGKRSAANT CSMLQDVQAGRLTEVSELNGWLLDTAARLGCMALPTHGALVDLVKGRVALSKEELARRLVLKEKAL* |
| Coding | >OphauG2|507 ATGCCACCTCGCCAACTACAGACTCTTGCAAACGACAAGTGGTTGACGCAAATTGCAAGCCATGGGTCGCCGCCA CCACGGCTCTACGCCTGGACCGCTGCCAATCTATCAGGCACTGGTGCGCACAACCGCGAGCCGCGAAAAGACAAT GACAGCCGACGAATACACATGCTTGGCATTGGCAACATTGGGCGTTTGTTTGCCAGCAATTTGGCCAGCCTCCCC GATAGACCGCCCATTACATTGATCCTGCGCCGTCCCGAACTGCTGGCAAAGTGGTATTCCATCAACTGCCAGGGC ATCCAAATCGTTCGCCCTGGCGTCGACGGAAGCGGAAACAAGACTTCAAGTCACAAGTCTGCTTTTGATGTCGAG TGCTGGTGCGAGACACCTCCGCCACACGGCCCTATTCATCACCCTTTTCCCGTAAACAAACTCATCGTCACAACA AAGGCAGCCTCTGCCCTGCCTGCCGTGGACCGCCTTCGCCGCTACCTCGCCCCCGACTGCGCCGTCGTCATGGTA CACAATGGAGTCTCGCCGCTGTGGCCGCCGCACGGAGACGAATATCTGGAACAGCGATACCCCAACGGCGGCGCG CCTCGCTTCTTCAGCGCCGTCACTTCTCATGCTCTCTGGTCCATGGGCGACTTTTGTAGCATGCACGTCGCCCCG GGGGACTCGGTCATGGGGCCCATTCTGCCCGCAGGACCGAATGGGGATATCGAAGCCTCTTCACCATGCCCAGAG ACACCGAGTGCAGGACAAGGCCTGATGCAACAGATCAAAGCTGCCAAGGGGCTTCAGTTCCGGTCGGTGGCGTGG CGTGAGCTTTGGCTGCTGCAACTCGACAAGCTCGTCGTCAACACCACAATCAATCCACTAGCGTCAGTTCTGCGC TGCAAAAACGGGCAGCTCTTTGAAAACAGCCACGACAGCGTGATTCCCCTCATCATGGACCGTCTGCTGCAGGAA ACGTGCCACGTTATCCAGGCTCTTGTGTCGCATCCAGCCTCTTGCCCCATGGTTGGCCCAGACGGAGTCGAGCCG CTCAATCAACGCTACACGGTGTGCCAAATGAGGGACATGGTGTGTGACATTGGCAAAAGATCGGCCGCCAACACG TGCTCAATGCTCCAGGATGTGCAAGCCGGTCGGCTAACCGAGGTTAGCGAGCTCAACGGTTGGCTGCTCGACACT GCGGCTCGTCTTGGGTGCATGGCCCTGCCCACTCATGGCGCCCTGGTTGACTTGGTCAAGGGCCGCGTGGCTTTG AGCAAGGAGGAGCTGGCACGCCGCCTTGTTTTGAAAGAAAAGGCCCTTTGA |
| Transcript | >OphauG2|507 ATGCCACCTCGCCAACTACAGACTCTTGCAAACGACAAGTGGTTGACGCAAATTGCAAGCCATGGGTCGCCGCCA CCACGGCTCTACGCCTGGACCGCTGCCAATCTATCAGGCACTGGTGCGCACAACCGCGAGCCGCGAAAAGACAAT GACAGCCGACGAATACACATGCTTGGCATTGGCAACATTGGGCGTTTGTTTGCCAGCAATTTGGCCAGCCTCCCC GATAGACCGCCCATTACATTGATCCTGCGCCGTCCCGAACTGCTGGCAAAGTGGTATTCCATCAACTGCCAGGGC ATCCAAATCGTTCGCCCTGGCGTCGACGGAAGCGGAAACAAGACTTCAAGTCACAAGTCTGCTTTTGATGTCGAG TGCTGGTGCGAGACACCTCCGCCACACGGCCCTATTCATCACCCTTTTCCCGTAAACAAACTCATCGTCACAACA AAGGCAGCCTCTGCCCTGCCTGCCGTGGACCGCCTTCGCCGCTACCTCGCCCCCGACTGCGCCGTCGTCATGGTA CACAATGGAGTCTCGCCGCTGTGGCCGCCGCACGGAGACGAATATCTGGAACAGCGATACCCCAACGGCGGCGCG CCTCGCTTCTTCAGCGCCGTCACTTCTCATGCTCTCTGGTCCATGGGCGACTTTTGTAGCATGCACGTCGCCCCG GGGGACTCGGTCATGGGGCCCATTCTGCCCGCAGGACCGAATGGGGATATCGAAGCCTCTTCACCATGCCCAGAG ACACCGAGTGCAGGACAAGGCCTGATGCAACAGATCAAAGCTGCCAAGGGGCTTCAGTTCCGGTCGGTGGCGTGG CGTGAGCTTTGGCTGCTGCAACTCGACAAGCTCGTCGTCAACACCACAATCAATCCACTAGCGTCAGTTCTGCGC TGCAAAAACGGGCAGCTCTTTGAAAACAGCCACGACAGCGTGATTCCCCTCATCATGGACCGTCTGCTGCAGGAA ACGTGCCACGTTATCCAGGCTCTTGTGTCGCATCCAGCCTCTTGCCCCATGGTTGGCCCAGACGGAGTCGAGCCG CTCAATCAACGCTACACGGTGTGCCAAATGAGGGACATGGTGTGTGACATTGGCAAAAGATCGGCCGCCAACACG TGCTCAATGCTCCAGGATGTGCAAGCCGGTCGGCTAACCGAGGTTAGCGAGCTCAACGGTTGGCTGCTCGACACT GCGGCTCGTCTTGGGTGCATGGCCCTGCCCACTCATGGCGCCCTGGTTGACTTGGTCAAGGGCCGCGTGGCTTTG AGCAAGGAGGAGCTGGCACGCCGCCTTGTTTTGAAAGAAAAGGCCCTTTGA |
| Gene | >OphauG2|507 ATGCCACCTCGCCAACTACAGACTCTTGCAAACGACAAGTGGTTGACGCAAATTGCAAGCCATGGGTCGCCGCCA CCACGGCTCTACGCCTGGACCGCTGCCAATCTATCAGGCACTGGTGCGCACAACCGCGAGCCGCGAAAAGACAAT GACAGCCGACGAATACACATGCTTGGCATTGGCAACATTGGGCGTTTGTTTGCCAGCAATTTGGCCAGCCTCCCC GATAGACCGCCCATTACATTGATCCTGCGCCGTCCCGAACTGCTGGCAAAGTGGTATTCCATCAACTGCCAGGGC ATCCAAATCGTTCGCCCTGGCGTCGACGGAAGCGGAAACAAGACTTCAAGTCACAAGTCTGCTTTTGATGTCGAG TGCTGGTGCGAGACACCTCCGCCACACGGCCCTATTCATCACCCTTTTCCCGTAAACAAACTCATCGTCACAACA AAGGCAGCCTCTGCCCTGCCTGCCGTGGACCGCCTTCGCCGCTACCTCGCCCCCGACTGCGCCGTCGTCATGGTA CACAATGGAGTCTCGCCGCTGTGGCCGCCGCACGGAGACGAATATCTGGAACAGCGATACCCCAACGGCGGCGCG CCTCGCTTCTTCAGCGCCGTCACTTCTCATGCTCTCTGGTCCATGGGCGACTTTTGTAGCATGCACGTCGCCCCG GGGGACTCGGTCATGGGGCCCATTCTGCCCGCAGGACCGAATGGGGATATCGAAGCCTCTTCACCATGCCCAGAG ACACCGAGTGCAGGACAAGGCCTGATGCAACAGATCAAAGCTGCCAAGGGGCTTCAGTTCCGGTCGGTGGCGTGG CGTGAGCTTTGGCTGCTGCAACTCGACAAGCTCGTCGTCAACACCACAATCAATCCACTAGCGTCAGTTCTGCGC TGCAAAAACGGGCAGCTCTTTGAAAACAGCCACGACAGCGTGATTCCCCTCATCATGGACCGTCTGCTGCAGGAA ACGTGCCACGTTATCCAGGCTCTTGTGTCGCATCCAGCCTCTTGCCCCATGGTTGGCCCAGACGGAGTCGAGCCG CTCAATCAACGCTACACGGTGTGCCAAATGAGGGACATGGTGTGTGACATTGGCAAAAGATCGGCCGCCAACACG TGCTCAATGCTCCAGGATGTGCAAGCCGGTCGGCTAACCGAGGTTAGCGAGCTCAACGGTTGGCTGCTCGACACT GCGGCTCGTCTTGGGTGCATGGCCCTGCCCACTCATGGCGCCCTGGTTGACTTGGTCAAGGGCCGCGTGGCTTTG AGCAAGGAGGAGCTGGCACGCCGCCTTGTTTTGAAAGAAAAGGCCCTTTGA |