Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauG2|5019
Gene name
LocationContig_441:230..2555
Strand+
Gene length (bp)2325
Transcript length (bp)2121
Coding sequence length (bp)2121
Protein length (aa) 707

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04082 Fungal_trans Fungal specific transcription factor domain 7.6E-07 171 311
PF00172 Zn_clus Fungal Zn(2)-Cys(6) binuclear cluster domain 5.4E-06 21 57

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|P08638|LEUR_YEAST Regulatory protein LEU3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=LEU3 PE=1 SV=1 3 595 6.0E-39
sp|Q59UY7|SEF1_CANAL Transcriptional regulatory protein SEF1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=SEF1 PE=1 SV=1 22 403 8.0E-19
sp|P87164|SEF1_KLULA Putative transcription factor SEF1 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=SEF1 PE=3 SV=3 155 410 5.0E-15
sp|Q74Z37|SEF1_ASHGO Putative transcription factor SEF1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=SEF1 PE=3 SV=1 155 428 9.0E-14
sp|P34228|SEF1_YEAST Putative transcription factor SEF1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SEF1 PE=1 SV=4 155 411 1.0E-11
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|P08638|LEUR_YEAST Regulatory protein LEU3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=LEU3 PE=1 SV=1 3 595 6.0E-39
sp|Q59UY7|SEF1_CANAL Transcriptional regulatory protein SEF1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=SEF1 PE=1 SV=1 22 403 8.0E-19
sp|P87164|SEF1_KLULA Putative transcription factor SEF1 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=SEF1 PE=3 SV=3 155 410 5.0E-15
sp|Q74Z37|SEF1_ASHGO Putative transcription factor SEF1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=SEF1 PE=3 SV=1 155 428 9.0E-14
sp|P34228|SEF1_YEAST Putative transcription factor SEF1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SEF1 PE=1 SV=4 155 411 1.0E-11
sp|Q74Z37|SEF1_ASHGO Putative transcription factor SEF1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=SEF1 PE=3 SV=1 22 99 4.0E-07
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GO

GO Term Description Terminal node
GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific Yes
GO:0006355 regulation of transcription, DNA-templated Yes
GO:0003677 DNA binding Yes
GO:0006351 transcription, DNA-templated Yes
GO:0008270 zinc ion binding Yes
GO:0009059 macromolecule biosynthetic process No
GO:0046483 heterocycle metabolic process No
GO:1901576 organic substance biosynthetic process No
GO:0018130 heterocycle biosynthetic process No
GO:0009058 biosynthetic process No
GO:0008152 metabolic process No
GO:0031323 regulation of cellular metabolic process No
GO:0008150 biological_process No
GO:0080090 regulation of primary metabolic process No
GO:0060255 regulation of macromolecule metabolic process No
GO:1903506 regulation of nucleic acid-templated transcription No
GO:0010468 regulation of gene expression No
GO:0019219 regulation of nucleobase-containing compound metabolic process No
GO:0050789 regulation of biological process No
GO:0044238 primary metabolic process No
GO:1901363 heterocyclic compound binding No
GO:0046872 metal ion binding No
GO:0003676 nucleic acid binding No
GO:0034654 nucleobase-containing compound biosynthetic process No
GO:0043167 ion binding No
GO:1901362 organic cyclic compound biosynthetic process No
GO:2001141 regulation of RNA biosynthetic process No
GO:0019222 regulation of metabolic process No
GO:0050794 regulation of cellular process No
GO:0032774 RNA biosynthetic process No
GO:0051171 regulation of nitrogen compound metabolic process No
GO:0031326 regulation of cellular biosynthetic process No
GO:1901360 organic cyclic compound metabolic process No
GO:0034641 cellular nitrogen compound metabolic process No
GO:0097659 nucleic acid-templated transcription No
GO:0006725 cellular aromatic compound metabolic process No
GO:0016070 RNA metabolic process No
GO:0051252 regulation of RNA metabolic process No
GO:0043169 cation binding No
GO:0044237 cellular metabolic process No
GO:0006139 nucleobase-containing compound metabolic process No
GO:0097159 organic cyclic compound binding No
GO:0003700 DNA-binding transcription factor activity No
GO:0010556 regulation of macromolecule biosynthetic process No
GO:0009889 regulation of biosynthetic process No
GO:0003674 molecular_function No
GO:0090304 nucleic acid metabolic process No
GO:0046914 transition metal ion binding No
GO:0044249 cellular biosynthetic process No
GO:0044271 cellular nitrogen compound biosynthetic process No
GO:0019438 aromatic compound biosynthetic process No
GO:0071704 organic substance metabolic process No
GO:0005488 binding No
GO:0006807 nitrogen compound metabolic process No
GO:0065007 biological regulation No
GO:0043170 macromolecule metabolic process No
GO:0009987 cellular process No
GO:0140110 transcription regulator activity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 24 0.45

Transmembrane Domains

(None)

Transcription Factor Class

Transcription Factor Class
(based on PFAM domains)
Fungal Specific TF

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauG2|5019
MDEDHGDHGDHDRKRQPGVKRACNECRQQKLRCDVVQDPFQTCSRCNRLKLECKIESNFKRIGKRSKHAEMEREI
ERLRRKVARAKSHGFLSQDDEHADGSPLPMMASAPHANVSSTHDHVRHGSMMGSDEAVSSLLNLKTGGNFAMQPQ
YSHQLENVRLNDSQVAHLFNEFFYRYHPFLPFLNPQQPPEIYKQQHPLLFWSMIAVAARRFTRSSDCRNLLDQLS
GPLTRYLWSTIGEVPSNYHVVKALCLLCTWPLPTSTTTSDPTHILCGVMMKTATGVGLHRPNHIRDFSRVSVDLD
ADQLRDRITTWAVCNIVAQSIGTGYGQPASTLYDWTLAMKSSDSDQRSSMHLSPELEARLQIERFCDKVSKEMYS
NASDPRGVAGDEHRAILLRVFRRDYGELHASIMSQTWPNCVVSLHLRAAGLHMRLAGLFDSSKTPGYMDDLMGLW
RAATSFLDEFLQVGRTTFPRDAISGNLLPYATNYLQQMLVAATFTLLKLMKSFLYNTIDFERGRSLFHHAIRAIR
ATSVVTNDLQWRLAELMVQMWNGARLEHRNRSIKSEEDTPIQIDDSLQLKVRCRHSMSLVFDSVWRWREEFQAQG
RGSLENTKHPTNPDSANDSSAASSQMDSSLMAPDMPSAANNVVNMNGTLASANNAAIAPTASAPNSMIGASMAYS
DANYELFDPQNWMLDGLIDFNYNMITPLEGA*
Coding >OphauG2|5019
ATGGATGAGGATCATGGCGACCACGGCGACCACGACCGCAAGCGCCAGCCCGGAGTCAAGCGCGCTTGCAACGAA
TGCCGCCAACAAAAGTTGCGCTGCGATGTCGTCCAAGATCCCTTCCAGACCTGCTCCCGCTGCAACCGGCTCAAG
CTCGAGTGCAAAATCGAGTCCAACTTCAAACGCATAGGAAAGCGCTCCAAGCACGCCGAAATGGAACGCGAAATT
GAGAGGCTGCGTCGCAAAGTTGCCCGCGCCAAGTCGCACGGCTTCCTGTCACAAGATGACGAACATGCCGATGGC
TCTCCTCTGCCCATGATGGCTTCGGCCCCTCATGCCAATGTGTCGTCGACCCACGACCATGTCCGCCATGGCTCC
ATGATGGGCTCGGATGAAGCTGTATCCTCACTGCTCAACCTTAAGACGGGTGGCAACTTTGCCATGCAGCCCCAG
TATTCACACCAACTTGAAAATGTCCGCTTAAACGACTCTCAAGTCGCTCACCTATTCAACGAGTTCTTTTATAGA
TACCATCCCTTTCTCCCTTTCCTCAATCCCCAACAGCCCCCCGAAATTTACAAGCAGCAGCACCCCTTGCTCTTC
TGGTCCATGATTGCAGTCGCCGCCCGTCGCTTCACCCGCTCCTCGGACTGTCGCAATCTACTCGACCAATTGTCA
GGCCCCTTGACGCGCTACCTGTGGTCCACCATTGGCGAGGTGCCCAGCAACTACCATGTCGTCAAGGCCTTGTGT
CTTCTTTGCACCTGGCCACTGCCCACGAGCACCACCACGTCGGACCCGACTCACATTCTCTGCGGCGTCATGATG
AAGACGGCCACGGGCGTCGGCTTGCACCGCCCAAACCACATCCGCGACTTTTCCCGCGTCTCGGTTGATCTCGAC
GCCGACCAGCTTCGCGATCGCATCACCACCTGGGCCGTTTGCAACATTGTTGCCCAAAGCATTGGCACCGGCTAC
GGCCAGCCCGCCTCGACTCTATACGACTGGACCCTGGCCATGAAGTCGTCCGACTCGGACCAGCGCTCATCAATG
CATCTTTCACCCGAGCTCGAGGCACGCCTGCAGATTGAGCGCTTCTGCGACAAGGTGTCCAAGGAAATGTACAGC
AACGCCAGCGACCCACGCGGCGTCGCTGGCGACGAGCACCGTGCCATTCTACTCAGGGTCTTTCGCCGAGACTAC
GGCGAGCTGCACGCCTCCATAATGTCCCAGACGTGGCCCAATTGCGTCGTGAGCCTGCATCTGCGTGCCGCTGGC
CTTCACATGCGGCTGGCCGGCCTTTTTGATTCGAGCAAGACGCCGGGATACATGGACGACCTCATGGGCCTCTGG
CGCGCTGCCACGAGCTTCCTCGATGAGTTTCTTCAAGTTGGCAGGACAACCTTTCCCAGAGATGCCATCAGCGGC
AACCTCCTTCCATATGCTACCAATTACCTGCAGCAGATGCTTGTTGCCGCTACCTTTACTCTGCTCAAACTCATG
AAGTCGTTTCTTTACAATACCATTGACTTTGAGCGTGGACGCAGTCTGTTTCATCACGCCATTCGCGCCATTCGC
GCCACGAGTGTTGTAACCAATGATTTGCAGTGGCGACTGGCCGAACTCATGGTGCAGATGTGGAATGGCGCCAGA
CTGGAGCACCGCAATCGTAGCATCAAATCCGAGGAGGATACGCCCATACAGATTGACGACAGCCTACAGCTCAAG
GTTCGCTGTCGCCACAGCATGAGCCTCGTCTTTGACTCGGTGTGGCGCTGGCGAGAGGAATTTCAGGCTCAAGGA
AGGGGCTCTCTTGAGAACACAAAACATCCCACCAATCCCGACTCAGCTAACGACTCTTCGGCAGCTTCGTCTCAA
ATGGACAGTTCTCTTATGGCCCCTGATATGCCTTCTGCTGCCAACAACGTGGTCAACATGAACGGCACCCTCGCT
TCAGCAAACAATGCTGCAATTGCACCGACAGCTTCTGCCCCAAACAGCATGATTGGGGCTTCCATGGCCTATAGT
GACGCTAATTACGAGCTGTTTGATCCTCAGAACTGGATGCTGGATGGGCTCATCGACTTCAATTATAACATGATT
ACTCCGTTGGAGGGGGCATAG
Transcript >OphauG2|5019
ATGGATGAGGATCATGGCGACCACGGCGACCACGACCGCAAGCGCCAGCCCGGAGTCAAGCGCGCTTGCAACGAA
TGCCGCCAACAAAAGTTGCGCTGCGATGTCGTCCAAGATCCCTTCCAGACCTGCTCCCGCTGCAACCGGCTCAAG
CTCGAGTGCAAAATCGAGTCCAACTTCAAACGCATAGGAAAGCGCTCCAAGCACGCCGAAATGGAACGCGAAATT
GAGAGGCTGCGTCGCAAAGTTGCCCGCGCCAAGTCGCACGGCTTCCTGTCACAAGATGACGAACATGCCGATGGC
TCTCCTCTGCCCATGATGGCTTCGGCCCCTCATGCCAATGTGTCGTCGACCCACGACCATGTCCGCCATGGCTCC
ATGATGGGCTCGGATGAAGCTGTATCCTCACTGCTCAACCTTAAGACGGGTGGCAACTTTGCCATGCAGCCCCAG
TATTCACACCAACTTGAAAATGTCCGCTTAAACGACTCTCAAGTCGCTCACCTATTCAACGAGTTCTTTTATAGA
TACCATCCCTTTCTCCCTTTCCTCAATCCCCAACAGCCCCCCGAAATTTACAAGCAGCAGCACCCCTTGCTCTTC
TGGTCCATGATTGCAGTCGCCGCCCGTCGCTTCACCCGCTCCTCGGACTGTCGCAATCTACTCGACCAATTGTCA
GGCCCCTTGACGCGCTACCTGTGGTCCACCATTGGCGAGGTGCCCAGCAACTACCATGTCGTCAAGGCCTTGTGT
CTTCTTTGCACCTGGCCACTGCCCACGAGCACCACCACGTCGGACCCGACTCACATTCTCTGCGGCGTCATGATG
AAGACGGCCACGGGCGTCGGCTTGCACCGCCCAAACCACATCCGCGACTTTTCCCGCGTCTCGGTTGATCTCGAC
GCCGACCAGCTTCGCGATCGCATCACCACCTGGGCCGTTTGCAACATTGTTGCCCAAAGCATTGGCACCGGCTAC
GGCCAGCCCGCCTCGACTCTATACGACTGGACCCTGGCCATGAAGTCGTCCGACTCGGACCAGCGCTCATCAATG
CATCTTTCACCCGAGCTCGAGGCACGCCTGCAGATTGAGCGCTTCTGCGACAAGGTGTCCAAGGAAATGTACAGC
AACGCCAGCGACCCACGCGGCGTCGCTGGCGACGAGCACCGTGCCATTCTACTCAGGGTCTTTCGCCGAGACTAC
GGCGAGCTGCACGCCTCCATAATGTCCCAGACGTGGCCCAATTGCGTCGTGAGCCTGCATCTGCGTGCCGCTGGC
CTTCACATGCGGCTGGCCGGCCTTTTTGATTCGAGCAAGACGCCGGGATACATGGACGACCTCATGGGCCTCTGG
CGCGCTGCCACGAGCTTCCTCGATGAGTTTCTTCAAGTTGGCAGGACAACCTTTCCCAGAGATGCCATCAGCGGC
AACCTCCTTCCATATGCTACCAATTACCTGCAGCAGATGCTTGTTGCCGCTACCTTTACTCTGCTCAAACTCATG
AAGTCGTTTCTTTACAATACCATTGACTTTGAGCGTGGACGCAGTCTGTTTCATCACGCCATTCGCGCCATTCGC
GCCACGAGTGTTGTAACCAATGATTTGCAGTGGCGACTGGCCGAACTCATGGTGCAGATGTGGAATGGCGCCAGA
CTGGAGCACCGCAATCGTAGCATCAAATCCGAGGAGGATACGCCCATACAGATTGACGACAGCCTACAGCTCAAG
GTTCGCTGTCGCCACAGCATGAGCCTCGTCTTTGACTCGGTGTGGCGCTGGCGAGAGGAATTTCAGGCTCAAGGA
AGGGGCTCTCTTGAGAACACAAAACATCCCACCAATCCCGACTCAGCTAACGACTCTTCGGCAGCTTCGTCTCAA
ATGGACAGTTCTCTTATGGCCCCTGATATGCCTTCTGCTGCCAACAACGTGGTCAACATGAACGGCACCCTCGCT
TCAGCAAACAATGCTGCAATTGCACCGACAGCTTCTGCCCCAAACAGCATGATTGGGGCTTCCATGGCCTATAGT
GACGCTAATTACGAGCTGTTTGATCCTCAGAACTGGATGCTGGATGGGCTCATCGACTTCAATTATAACATGATT
ACTCCGTTGGAGGGGGCATAG
Gene >OphauG2|5019
ATGGATGAGGATCATGGCGACCACGGCGACCACGACCGCAAGCGCCAGCCCGGAGTCAAGCGCGCTTGCAACGAA
TGCCGCCAACAAAAGGTTGTTGCCAAAATGGCCCCTGCCAGTCCCTTGTTGTCTTTTTCCTTGTTGTCAAGTTGC
TGCTCATGCTATCCTTTTGCCTCTCATGCTTGCTCCTCTCTGCCTCGTCGCCCTGGCTAACCAATCTTGTTTGCA
GTTGCGCTGCGATGTCGTCCAAGATCCCTTCCAGACCTGCTCCCGCTGCAACCGGCTCAAGCTCGAGTGCAAAAT
CGAGTCCAACTTCAAACGCATAGGAAAGCGCTCCAAGCACGCCGAAATGGAACGCGAAATTGAGAGGCTGCGTCG
CAAAGTTGCCCGCGCCAAGTCGCACGGCTTCCTGTCACAAGATGACGAACATGCCGATGGCTCTCCTCTGCCCAT
GATGGCTTCGGCCCCTCATGCCAATGTGTCGTCGACCCACGACCATGTCCGCCATGGCTCCATGATGGGCTCGGA
TGAAGCTGTATCCTCACTGCTCAACCTTAAGACGGGTGGCAACTTTGCCATGCAGCCCCAGTATTCACACCAACT
TGAAAATGTCCGCTTAAACGACTCTCAAGTCGCTCACCTATTCAACGAGTTCTTTTATAGATACCATCCCTTTCT
CCCTTTCCTCAATCCCCAACAGCCCCCCGAAATTTACAAGCAGCAGCACCCCTTGCTCTTCTGGTCCATGATTGC
AGTCGCCGCCCGTCGCTTCACCCGCTCCTCGGACTGTCGCAATCTACTCGACCAATTGTCAGGCCCCTTGACGCG
CTACCTGTGGTCCACCATTGGCGAGGTGCCCAGCAACTACCATGTCGTCAAGGCCTTGTGTCTTCTTTGCACCTG
GCCACTGCCCACGAGCACCACCACGTCGGACCCGACTCACATTCTCTGCGGCGTCATGATGAAGACGGCCACGGG
CGTCGGCTTGCACCGCCCAAACCACATCCGCGACTTTTCCCGCGTCTCGGTTGATCTCGACGCCGACCAGCTTCG
CGATCGCATCACCACCTGGGCCGTTTGCAACATTGTTGCCCAAAGCATTGGCACCGGCTACGGCCAGCCCGCCTC
GACTCTATACGACTGGACCCTGGCCATGAAGTCGTCCGACTCGGACCAGCGCTCATCAATGCATCTTTCACCCGA
GCTCGAGGCACGCCTGCAGATTGAGCGCTTCTGCGACAAGGTGTCCAAGGAAATGTACAGCAACGCCAGCGACCC
ACGCGGCGTCGCTGGCGACGAGCACCGTGCCATTCTACTCAGGGTCTTTCGCCGAGACTACGGCGAGCTGCACGC
CTCCATAATGTCCCAGACGTGGCCCAATTGCGTCGTGAGCCTGCATCTGCGTGCCGCTGGCCTTCACATGCGGCT
GGCCGGCCTTTTTGATTCGAGCAAGACGCCGGGATACATGGACGACCTCATGGGCCTCTGGCGCGCTGCCACGAG
CTTCCTCGATGAGTTTCTTCAAGTTGGCAGGACAACCTTTCCCAGAGATGCCATCAGCGGCAACCTCCTTCCATA
TGCTACCAATTACCTGCAGCAGATGCTTGTTGCCGCTACCTTTACTCTGCTCAAACTCATGAAGTCGTTTCTTTA
CAATACCATTGACTTTGAGCGTGGACGCAGTCTGTTTCATCACGCCATTCGCGCCATTCGCGCCACGAGTGTTGT
AACCAATGATTTGCAGTGGCGACTGGCCGAACTCATGGTGCAGATGTGGAATGGCGCCAGACTGGAGCACCGCAA
TCGTAGCATCAAATCCGAGGAGGATACGCCCATACAGATTGACGACAGCCTACAGCTCAAGGTTCGCTGTCGCCA
CAGCATGAGCCTCGTCTTTGACTCGGTGTGGCGCTGGCGAGAGGAATTTCAGGCTCAAGGAAGGGGCTCTCTTGA
GAGTGAGTACACGCTCTCTGTCCGACTTTGCTTTGGTTGGAACAGGGCAGCTAATGCTATCATGACACAGACACA
AAACATCCCACCAATCCCGACTCAGCTAACGACTCTTCGGCAGCTTCGTCTCAAATGGACAGTTCTCTTATGGCC
CCTGATATGCCTTCTGCTGCCAACAACGTGGTCAACATGAACGGCACCCTCGCTTCAGCAAACAATGCTGCAATT
GCACCGACAGCTTCTGCCCCAAACAGCATGATTGGGGCTTCCATGGCCTATAGTGACGCTAATTACGAGCTGTTT
GATCCTCAGAACTGGATGCTGGATGGGCTCATCGACTTCAATTATAACATGATTACTCCGTTGGAGGGGGCATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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