© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauG2|5008 |
| Gene name | |
| Location | Contig_44:38749..39895 |
| Strand | - |
| Gene length (bp) | 1146 |
| Transcript length (bp) | 981 |
| Coding sequence length (bp) | 981 |
| Protein length (aa) | 327 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01435 | Peptidase_M48 | Peptidase family M48 | 1.9E-36 | 101 | 287 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9P7G4|OMA1_SCHPO | Mitochondrial metalloendopeptidase OMA1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=oma1 PE=3 SV=1 | 20 | 300 | 5.0E-58 |
| sp|P36163|OMA1_YEAST | Mitochondrial metalloendopeptidase OMA1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=OMA1 PE=1 SV=2 | 112 | 312 | 2.0E-42 |
| sp|Q3SZN3|OMA1_BOVIN | Metalloendopeptidase OMA1, mitochondrial OS=Bos taurus GN=OMA1 PE=2 SV=2 | 40 | 300 | 4.0E-39 |
| sp|Q96E52|OMA1_HUMAN | Metalloendopeptidase OMA1, mitochondrial OS=Homo sapiens GN=OMA1 PE=1 SV=1 | 43 | 300 | 3.0E-37 |
| sp|D3ZS74|OMA1_RAT | Metalloendopeptidase OMA1, mitochondrial OS=Rattus norvegicus GN=Oma1 PE=3 SV=1 | 43 | 315 | 2.0E-35 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9P7G4|OMA1_SCHPO | Mitochondrial metalloendopeptidase OMA1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=oma1 PE=3 SV=1 | 20 | 300 | 5.0E-58 |
| sp|P36163|OMA1_YEAST | Mitochondrial metalloendopeptidase OMA1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=OMA1 PE=1 SV=2 | 112 | 312 | 2.0E-42 |
| sp|Q3SZN3|OMA1_BOVIN | Metalloendopeptidase OMA1, mitochondrial OS=Bos taurus GN=OMA1 PE=2 SV=2 | 40 | 300 | 4.0E-39 |
| sp|Q96E52|OMA1_HUMAN | Metalloendopeptidase OMA1, mitochondrial OS=Homo sapiens GN=OMA1 PE=1 SV=1 | 43 | 300 | 3.0E-37 |
| sp|D3ZS74|OMA1_RAT | Metalloendopeptidase OMA1, mitochondrial OS=Rattus norvegicus GN=Oma1 PE=3 SV=1 | 43 | 315 | 2.0E-35 |
| sp|Q9D8H7|OMA1_MOUSE | Metalloendopeptidase OMA1, mitochondrial OS=Mus musculus GN=Oma1 PE=1 SV=1 | 43 | 315 | 3.0E-35 |
| sp|E9QBI7|OMA1_DANRE | Metalloendopeptidase OMA1, mitochondrial OS=Danio rerio GN=oma1 PE=3 SV=1 | 9 | 300 | 1.0E-34 |
| sp|Q8ZCC3|BEPA_YERPE | Beta-barrel assembly-enhancing protease OS=Yersinia pestis GN=bepA PE=3 SV=1 | 99 | 282 | 4.0E-14 |
| sp|P66950|BEPA_SALTY | Beta-barrel assembly-enhancing protease OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=bepA PE=3 SV=1 | 132 | 282 | 3.0E-12 |
| sp|P66951|BEPA_SALTI | Beta-barrel assembly-enhancing protease OS=Salmonella typhi GN=bepA PE=3 SV=1 | 132 | 282 | 3.0E-12 |
| sp|P66949|BEPA_SHIFL | Beta-barrel assembly-enhancing protease OS=Shigella flexneri GN=bepA PE=3 SV=1 | 132 | 282 | 2.0E-11 |
| sp|P66948|BEPA_ECOLI | Beta-barrel assembly-enhancing protease OS=Escherichia coli (strain K12) GN=bepA PE=1 SV=1 | 132 | 282 | 2.0E-11 |
| sp|Q8XAD2|BEPA_ECO57 | Beta-barrel assembly-enhancing protease OS=Escherichia coli O157:H7 GN=bepA PE=3 SV=1 | 132 | 282 | 2.0E-11 |
| sp|Q9KQ40|BEPA_VIBCH | Putative beta-barrel assembly-enhancing protease OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) GN=VC_2164 PE=3 SV=1 | 102 | 281 | 9.0E-10 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0004222 | metalloendopeptidase activity | Yes |
| GO:0006508 | proteolysis | Yes |
| GO:0008152 | metabolic process | No |
| GO:0140096 | catalytic activity, acting on a protein | No |
| GO:0008233 | peptidase activity | No |
| GO:0008150 | biological_process | No |
| GO:1901564 | organonitrogen compound metabolic process | No |
| GO:0006807 | nitrogen compound metabolic process | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0019538 | protein metabolic process | No |
| GO:0043170 | macromolecule metabolic process | No |
| GO:0003824 | catalytic activity | No |
| GO:0004175 | endopeptidase activity | No |
| GO:0044238 | primary metabolic process | No |
| GO:0016787 | hydrolase activity | No |
| GO:0008237 | metallopeptidase activity | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 26 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 33 | 55 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauG2|5008 MATQTHLRNARPLVSDAAARRFAKAGTGRRQRLIILAVIVVSVGYYLSSVQRVPATGRWRFNILSDDLVAAAYAG SEEQTIRAIAAQGGRFLSRWDSRTMIVERVMNRLIPVSGIKDQNWDIYVIDDPRTANAFVLPGGKVFVYSGILNV CGSQDALAAVLGHEIAHSTASHAAERLSAAWVGNITLGSLFFLAGAAQGLVLFGIWNLIGGYYLQDLLFYLPMGR KQESEADYIGLMMMAEACYDPRTAVGFWKRMEDIQHHGGIELPEMLSTHPTSEHRVAQIESWMPAALKKRSESDC KGTAAFAKRFRSTLRGGFPLVSNPWK* |
| Coding | >OphauG2|5008 ATGGCCACGCAGACCCATTTGCGCAATGCCCGCCCCCTCGTATCCGATGCCGCTGCCCGTCGCTTCGCAAAGGCC GGCACTGGCCGCCGCCAGCGCCTCATTATCCTCGCTGTCATTGTCGTCTCTGTCGGCTACTACCTCTCGAGCGTA CAAAGGGTGCCTGCTACGGGCCGCTGGCGCTTCAACATCCTCTCGGATGACTTGGTTGCCGCCGCATACGCGGGC TCTGAAGAACAAACCATTAGAGCAATCGCGGCCCAAGGCGGCCGCTTTCTCTCCCGCTGGGATAGCCGGACCATG ATTGTTGAGCGTGTCATGAATCGCCTGATTCCTGTCAGTGGCATCAAGGACCAGAACTGGGACATTTACGTCATT GACGATCCAAGAACCGCCAATGCCTTTGTCCTACCCGGGGGCAAGGTCTTTGTCTATAGCGGCATTCTCAACGTG TGCGGCAGTCAAGATGCCCTGGCCGCCGTTCTTGGCCACGAGATTGCACACAGCACCGCCTCCCATGCCGCTGAG CGCCTCTCGGCCGCCTGGGTAGGCAACATCACCCTCGGCAGCCTCTTCTTCCTCGCTGGCGCCGCCCAGGGCCTC GTGCTGTTTGGCATATGGAACTTGATTGGAGGCTATTATCTCCAAGACTTGCTCTTTTACCTTCCCATGGGCCGA AAACAGGAAAGCGAGGCCGACTACATTGGCCTGATGATGATGGCTGAGGCATGCTACGACCCTCGCACCGCCGTC GGCTTCTGGAAGCGGATGGAGGATATTCAGCACCATGGCGGCATCGAGTTGCCCGAGATGCTCAGCACCCATCCC ACGAGCGAACACAGGGTAGCCCAAATCGAGAGTTGGATGCCAGCGGCCTTGAAGAAGCGCTCCGAGAGCGACTGC AAGGGAACCGCTGCATTTGCAAAACGCTTCAGAAGTACCCTAAGAGGAGGCTTTCCGCTTGTAAGCAATCCCTGG AAGTGA |
| Transcript | >OphauG2|5008 ATGGCCACGCAGACCCATTTGCGCAATGCCCGCCCCCTCGTATCCGATGCCGCTGCCCGTCGCTTCGCAAAGGCC GGCACTGGCCGCCGCCAGCGCCTCATTATCCTCGCTGTCATTGTCGTCTCTGTCGGCTACTACCTCTCGAGCGTA CAAAGGGTGCCTGCTACGGGCCGCTGGCGCTTCAACATCCTCTCGGATGACTTGGTTGCCGCCGCATACGCGGGC TCTGAAGAACAAACCATTAGAGCAATCGCGGCCCAAGGCGGCCGCTTTCTCTCCCGCTGGGATAGCCGGACCATG ATTGTTGAGCGTGTCATGAATCGCCTGATTCCTGTCAGTGGCATCAAGGACCAGAACTGGGACATTTACGTCATT GACGATCCAAGAACCGCCAATGCCTTTGTCCTACCCGGGGGCAAGGTCTTTGTCTATAGCGGCATTCTCAACGTG TGCGGCAGTCAAGATGCCCTGGCCGCCGTTCTTGGCCACGAGATTGCACACAGCACCGCCTCCCATGCCGCTGAG CGCCTCTCGGCCGCCTGGGTAGGCAACATCACCCTCGGCAGCCTCTTCTTCCTCGCTGGCGCCGCCCAGGGCCTC GTGCTGTTTGGCATATGGAACTTGATTGGAGGCTATTATCTCCAAGACTTGCTCTTTTACCTTCCCATGGGCCGA AAACAGGAAAGCGAGGCCGACTACATTGGCCTGATGATGATGGCTGAGGCATGCTACGACCCTCGCACCGCCGTC GGCTTCTGGAAGCGGATGGAGGATATTCAGCACCATGGCGGCATCGAGTTGCCCGAGATGCTCAGCACCCATCCC ACGAGCGAACACAGGGTAGCCCAAATCGAGAGTTGGATGCCAGCGGCCTTGAAGAAGCGCTCCGAGAGCGACTGC AAGGGAACCGCTGCATTTGCAAAACGCTTCAGAAGTACCCTAAGAGGAGGCTTTCCGCTTGTAAGCAATCCCTGG AAGTGA |
| Gene | >OphauG2|5008 ATGGCCACGCAGACCGTGGCCACGCAGACAATGGCCACGAATACCAACATCTGCGCCAGCAACACCAGCATTTGC GCAATGCCCGCCCCCTCGTATCCGATGCCGCTGCCCGTCGCTTCGCAAAGGCCGGCACTGGCCGCCGCCAGCGCC TCATTATCCTCGCTGTCATTGTCGTCTCTGTCGGCTACTACCTCTCGAGCGTACAAAGGGTGCCTGCTACGGGCC GCTGGCGCTTCAACATCCTCTCGGATGACTTGGTTGCCGCCGCATACGCGGGCTCTGAAGAACAAACCATTAGAG CAATCGCGGCCCAAGGCGGCCGCTTTCTCTCCCGCTGGGATAGCCGGACCATGATTGTTGAGCGTGTCATGAATC GCCTGATTCCTGTCAGTGGCATCAAGGACCAGAACTGGGACATTTACGTCATTGACGATCCAAGTGCGTCACATG ATGCCACGGCAAAGCGCCACCGCCATGCTAACCCATTGGCCTCTTTAGGAACCGCCAATGCCTTTGTCCTACCCG GGGGCAAGGTCTTTGTCTATAGCGGCATTCTCAACGTGTGCGGCAGTCAAGATGCCCTGGCCGCCGTTCTTGGCC ACGAGATTGCACACAGCACCGCCTCCCATGCCGCTGAGCGCCTCTCGGCCGCCTGGGTAGGCAACATCACCCTCG GCAGCCTCTTCTTCCTCGCTGGCGCCGCCCAGGGCCTCGTGCTGTTTGGCATATGGAACTTGATTGGAGGCTATT ATCTCCAAGACTTGCTCTTTTACCTTCCCATGGGCCGAAAACAGGAAAGCGAGGCCGACTACATTGGCCTGATGA TGATGGCTGAGGCATGCTACGACCCTCGCACCGCCGTCGGCTTCTGGAAGCGGATGGAGGATATTCAGCACCATG GCGGCATCGAGTTGCCCGAGATGCTCAGCACCCATCCCACGGTAAGCATGCACATGGCAATTCGTTGGGCGCTTT GGCGCTGACATGCAGCAGAGCGAACACAGGGTAGCCCAAATCGAGAGTTGGATGCCAGCGGCCTTGAAGAAGCGC TCCGAGAGCGACTGCAAGGGAACCGCTGCATTTGCAAAACGCTTCAGAAGTACCCTAAGAGGAGGCTTTCCGCTT GTAAGCAATCCCTGGAAGTGA |