Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauG2|5000
Gene name
LocationContig_44:20842..22129
Strand-
Gene length (bp)1287
Transcript length (bp)1197
Coding sequence length (bp)1197
Protein length (aa) 399

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00730 HhH-GPD HhH-GPD superfamily base excision DNA repair protein 1.7E-16 169 314
PF00633 HHH Helix-hairpin-helix motif 3.3E-06 247 267

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|C8VC05|NTH_EMENI Endonuclease III homolog OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=nth1 PE=3 SV=2 1 353 3.0E-105
sp|Q09907|NTH_SCHPO Endonuclease III homolog OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=nth1 PE=1 SV=1 118 358 5.0E-80
sp|A7M7B9|NTH_CHICK Endonuclease III-like protein 1 OS=Gallus gallus GN=NTHL1 PE=2 SV=1 90 356 1.0E-68
sp|O35980|NTH_MOUSE Endonuclease III-like protein 1 OS=Mus musculus GN=Nthl1 PE=2 SV=2 27 355 2.0E-67
sp|P78549|NTH_HUMAN Endonuclease III-like protein 1 OS=Homo sapiens GN=NTHL1 PE=1 SV=2 49 355 3.0E-67
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Swissprot ID Swissprot Description Start End E-value
sp|C8VC05|NTH_EMENI Endonuclease III homolog OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=nth1 PE=3 SV=2 1 353 3.0E-105
sp|Q09907|NTH_SCHPO Endonuclease III homolog OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=nth1 PE=1 SV=1 118 358 5.0E-80
sp|A7M7B9|NTH_CHICK Endonuclease III-like protein 1 OS=Gallus gallus GN=NTHL1 PE=2 SV=1 90 356 1.0E-68
sp|O35980|NTH_MOUSE Endonuclease III-like protein 1 OS=Mus musculus GN=Nthl1 PE=2 SV=2 27 355 2.0E-67
sp|P78549|NTH_HUMAN Endonuclease III-like protein 1 OS=Homo sapiens GN=NTHL1 PE=1 SV=2 49 355 3.0E-67
sp|Q2KID2|NTH_BOVIN Endonuclease III-like protein 1 OS=Bos taurus GN=NTHL1 PE=2 SV=1 120 343 4.0E-65
sp|P54137|NTH_CAEEL Endonuclease III homolog OS=Caenorhabditis elegans GN=nth-1 PE=1 SV=2 143 391 2.0E-62
sp|Q9SIC4|NTH1_ARATH Endonuclease III homolog 1, chloroplastic OS=Arabidopsis thaliana GN=NTH1 PE=2 SV=2 119 357 1.0E-58
sp|B9DFZ0|NTH2_ARATH Endonuclease III homolog 2, chloroplastic OS=Arabidopsis thaliana GN=NTH2 PE=2 SV=1 119 354 3.0E-56
sp|Q8SRB8|NTH_ENCCU Endonuclease III homolog OS=Encephalitozoon cuniculi (strain GB-M1) GN=NTH1 PE=1 SV=1 143 354 1.0E-50
sp|P31378|NTH1_YEAST Endonuclease III homolog 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=NTG1 PE=1 SV=1 116 389 4.0E-49
sp|Q08214|NTH2_YEAST Endonuclease III homolog 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=NTG2 PE=1 SV=1 112 343 2.0E-44
sp|Q9WYK0|END3_THEMA Endonuclease III OS=Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) GN=nth PE=3 SV=1 165 357 2.0E-24
sp|Q58030|END3_METJA Endonuclease III OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=nth PE=3 SV=2 165 358 8.0E-23
sp|P73715|END3_SYNY3 Endonuclease III OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=nth PE=3 SV=1 168 355 2.0E-17
sp|P46303|UVEN_MICLC Ultraviolet N-glycosylase/AP lyase OS=Micrococcus luteus (strain ATCC 4698 / DSM 20030 / JCM 1464 / NBRC 3333 / NCIMB 9278 / NCTC 2665 / VKM Ac-2230) GN=pdg PE=1 SV=2 165 345 7.0E-15
sp|P39788|END3_BACSU Endonuclease III OS=Bacillus subtilis (strain 168) GN=nth PE=3 SV=1 165 357 9.0E-14
sp|Q89AW4|END3_BUCBP Endonuclease III OS=Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp) GN=nth PE=3 SV=1 165 356 7.0E-13
sp|Q9CB92|END3_MYCLE Endonuclease III OS=Mycobacterium leprae (strain TN) GN=nth PE=3 SV=2 206 345 1.0E-12
sp|P9WQ11|END3_MYCTU Endonuclease III OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=nth PE=1 SV=1 217 345 2.0E-12
sp|P9WQ10|END3_MYCTO Endonuclease III OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=nth PE=3 SV=1 217 345 2.0E-12
sp|P63541|END3_MYCBO Endonuclease III OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=nth PE=3 SV=1 217 345 2.0E-12
sp|P0AB83|END3_ECOLI Endonuclease III OS=Escherichia coli (strain K12) GN=nth PE=1 SV=1 165 356 2.0E-12
sp|P0AB84|END3_ECOL6 Endonuclease III OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=nth PE=3 SV=1 165 356 2.0E-12
sp|P44319|END3_HAEIN Endonuclease III OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=nth PE=3 SV=1 165 356 8.0E-12
sp|Q8KA16|END3_BUCAP Endonuclease III OS=Buchnera aphidicola subsp. Schizaphis graminum (strain Sg) GN=nth PE=3 SV=1 165 357 5.0E-11
sp|Q4UK93|END3_RICFE Endonuclease III OS=Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) GN=nth PE=3 SV=1 165 345 9.0E-08
sp|Q92GH4|END3_RICCN Endonuclease III OS=Rickettsia conorii (strain ATCC VR-613 / Malish 7) GN=nth PE=3 SV=1 165 345 1.0E-07
sp|Q68W04|END3_RICTY Endonuclease III OS=Rickettsia typhi (strain ATCC VR-144 / Wilmington) GN=nth PE=3 SV=1 165 345 4.0E-07
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GO

GO Term Description Terminal node
GO:0003677 DNA binding Yes
GO:0006284 base-excision repair Yes
GO:0005488 binding No
GO:0033554 cellular response to stress No
GO:0003676 nucleic acid binding No
GO:1901363 heterocyclic compound binding No
GO:0044238 primary metabolic process No
GO:0008150 biological_process No
GO:0006259 DNA metabolic process No
GO:0006950 response to stress No
GO:0008152 metabolic process No
GO:0009987 cellular process No
GO:0046483 heterocycle metabolic process No
GO:0043170 macromolecule metabolic process No
GO:0006281 DNA repair No
GO:0050896 response to stimulus No
GO:1901360 organic cyclic compound metabolic process No
GO:0006807 nitrogen compound metabolic process No
GO:0071704 organic substance metabolic process No
GO:0003674 molecular_function No
GO:0090304 nucleic acid metabolic process No
GO:0097159 organic cyclic compound binding No
GO:0006139 nucleobase-containing compound metabolic process No
GO:0044260 cellular macromolecule metabolic process No
GO:0051716 cellular response to stimulus No
GO:0044237 cellular metabolic process No
GO:0006725 cellular aromatic compound metabolic process No
GO:0006974 cellular response to DNA damage stimulus No
GO:0034641 cellular nitrogen compound metabolic process No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup105
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|1376
Ophiocordyceps australis 1348a (Ghana) OphauG2|5000 (this protein)
Ophiocordyceps australis map64 (Brazil) OphauB2|2330
Ophiocordyceps australis map64 (Brazil) OphauB2|6638
Ophiocordyceps camponoti-floridani Ophcf2|02415
Ophiocordyceps camponoti-floridani Ophcf2|05427
Ophiocordyceps camponoti-floridani Ophcf2|05428
Ophiocordyceps camponoti-rufipedis Ophun1|2176
Ophiocordyceps camponoti-rufipedis Ophun1|6758
Ophiocordyceps kimflemingae Ophio5|1176
Ophiocordyceps kimflemingae Ophio5|1177
Ophiocordyceps kimflemingae Ophio5|4504
Ophiocordyceps subramaniannii Hirsu2|6059
Ophiocordyceps subramaniannii Hirsu2|667
Ophiocordyceps subramaniannii Hirsu2|826
Ophiocordyceps subramaniannii Hirsu2|9048

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauG2|5000
MRSSRISQDASKVFDRVSSAASPPCRVTRSLSRFAYIRTATETATPDIEDGITAQTAAPKRRREVSPASTRKTMK
QELQHELPETVEMKSQSPLKTPRRVRKGARKTIDSGTGEEIVTPPSDWQEMYRTVEKMRAPGGIAHGAPVDSMGC
ERLADPEASPRDRRFHTLVALMLSSQTKDTVNAVAMERLKKELPPHQPGAPAGLNLENMVAVDAKLLNELIWAVG
FHNNKTKYLKQTAVLLRDRWKGDVPDTIEGLVSLPGVGPKMAFLCLSAAWQRTEGIGVDVHVHRITNLWGWNKTK
APEETRLALQAWLPRDKWRDVNWLLVGLGQTICLPVGRRCGDCDLGLQGLCKSAERKKVAQGRRLDKTGSDVGIK
VEEAKRQVTVKREVVDATATTIR*
Coding >OphauG2|5000
ATGCGCTCGTCGAGGATCTCACAGGACGCGTCCAAGGTTTTTGATCGCGTGTCGTCTGCCGCATCTCCTCCCTGC
CGCGTGACCCGATCGCTATCTCGGTTTGCCTATATCCGTACAGCCACAGAGACGGCAACGCCGGACATTGAGGAT
GGCATCACTGCTCAAACGGCAGCGCCCAAGAGGCGGCGGGAAGTATCGCCTGCGTCGACTCGCAAGACGATGAAA
CAAGAGCTACAACATGAACTACCAGAGACTGTTGAGATGAAGTCTCAGTCACCGCTCAAGACACCCAGACGGGTT
AGGAAAGGTGCGCGCAAGACGATTGACTCGGGTACCGGAGAAGAGATTGTTACTCCTCCGTCGGACTGGCAAGAA
ATGTACAGGACGGTGGAAAAGATGCGCGCGCCCGGAGGCATTGCCCACGGGGCACCTGTCGATAGCATGGGCTGC
GAGCGATTGGCAGACCCCGAGGCGTCGCCACGTGATCGACGCTTCCACACGTTGGTAGCGCTCATGCTGTCGAGC
CAGACAAAGGACACGGTCAATGCCGTGGCCATGGAGAGGCTGAAGAAGGAACTTCCACCTCACCAGCCAGGCGCG
CCAGCGGGGCTTAATCTAGAAAACATGGTAGCAGTGGATGCCAAGCTACTAAACGAGCTTATTTGGGCAGTTGGC
TTCCACAACAATAAGACCAAGTATTTGAAGCAGACAGCCGTGTTGCTACGCGACAGGTGGAAGGGCGATGTGCCG
GACACGATTGAGGGACTGGTGTCGCTGCCCGGCGTTGGGCCCAAAATGGCATTTCTGTGCCTGTCAGCCGCATGG
CAGCGGACCGAGGGCATTGGGGTCGACGTGCACGTCCATCGCATCACAAATCTATGGGGGTGGAACAAGACCAAG
GCGCCCGAGGAAACGCGGCTGGCGTTGCAGGCGTGGCTCCCGCGCGACAAGTGGCGCGATGTCAACTGGCTGCTC
GTGGGCCTCGGCCAGACCATCTGCCTGCCTGTTGGACGGCGGTGCGGCGACTGCGACCTGGGTCTGCAAGGCCTC
TGCAAGTCTGCTGAGCGCAAAAAGGTGGCCCAGGGACGCCGCTTGGACAAGACGGGAAGCGACGTGGGCATCAAG
GTCGAGGAAGCGAAGCGACAAGTCACTGTCAAGCGGGAAGTGGTGGATGCGACGGCGACGACGATACGGTAG
Transcript >OphauG2|5000
ATGCGCTCGTCGAGGATCTCACAGGACGCGTCCAAGGTTTTTGATCGCGTGTCGTCTGCCGCATCTCCTCCCTGC
CGCGTGACCCGATCGCTATCTCGGTTTGCCTATATCCGTACAGCCACAGAGACGGCAACGCCGGACATTGAGGAT
GGCATCACTGCTCAAACGGCAGCGCCCAAGAGGCGGCGGGAAGTATCGCCTGCGTCGACTCGCAAGACGATGAAA
CAAGAGCTACAACATGAACTACCAGAGACTGTTGAGATGAAGTCTCAGTCACCGCTCAAGACACCCAGACGGGTT
AGGAAAGGTGCGCGCAAGACGATTGACTCGGGTACCGGAGAAGAGATTGTTACTCCTCCGTCGGACTGGCAAGAA
ATGTACAGGACGGTGGAAAAGATGCGCGCGCCCGGAGGCATTGCCCACGGGGCACCTGTCGATAGCATGGGCTGC
GAGCGATTGGCAGACCCCGAGGCGTCGCCACGTGATCGACGCTTCCACACGTTGGTAGCGCTCATGCTGTCGAGC
CAGACAAAGGACACGGTCAATGCCGTGGCCATGGAGAGGCTGAAGAAGGAACTTCCACCTCACCAGCCAGGCGCG
CCAGCGGGGCTTAATCTAGAAAACATGGTAGCAGTGGATGCCAAGCTACTAAACGAGCTTATTTGGGCAGTTGGC
TTCCACAACAATAAGACCAAGTATTTGAAGCAGACAGCCGTGTTGCTACGCGACAGGTGGAAGGGCGATGTGCCG
GACACGATTGAGGGACTGGTGTCGCTGCCCGGCGTTGGGCCCAAAATGGCATTTCTGTGCCTGTCAGCCGCATGG
CAGCGGACCGAGGGCATTGGGGTCGACGTGCACGTCCATCGCATCACAAATCTATGGGGGTGGAACAAGACCAAG
GCGCCCGAGGAAACGCGGCTGGCGTTGCAGGCGTGGCTCCCGCGCGACAAGTGGCGCGATGTCAACTGGCTGCTC
GTGGGCCTCGGCCAGACCATCTGCCTGCCTGTTGGACGGCGGTGCGGCGACTGCGACCTGGGTCTGCAAGGCCTC
TGCAAGTCTGCTGAGCGCAAAAAGGTGGCCCAGGGACGCCGCTTGGACAAGACGGGAAGCGACGTGGGCATCAAG
GTCGAGGAAGCGAAGCGACAAGTCACTGTCAAGCGGGAAGTGGTGGATGCGACGGCGACGACGATACGGTAG
Gene >OphauG2|5000
ATGCGCTCGTCGAGGATCTCACAGGACGCGTCCAAGGTTTTTGATCGCGTGTCGTCTGCCGCATCTCCTCCCTGC
CGCGTGACCCGATCGCTATCTCGGTTTGCCTATATCCGTACAGCCACAGAGACGGCAACGCCGGACATTGAGGAT
GGCATCACTGCTCAAACGGCAGCGCCCAAGAGGCGGCGGGAAGTATCGCCTGCGTCGACTCGCAAGACGATGAAA
CAAGAGCTACAACATGAACTACCAGAGACTGTTGAGATGAAGTCTCAGTCACCGCTCAAGACACCCAGACGGGTT
AGGAAAGGTGCGCGCAAGACGATTGACTCGGGTACCGGAGAAGAGATTGTTACTCCTCCGTCGGACTGGCAAGAA
ATGTACAGGACGGTGGAAAAGATGCGCGCGCCCGGAGGCATTGCCCACGGGGCACCTGTCGATAGCATGGGCTGC
GAGCGATTGGCAGACCCCGAGGCGTCGCCACGTGATCGACGCTTCCACACGTTGGTAGCGCTCATGCTGTCGAGC
CAGACAAAGGACACGGTCAATGCCGTGGCCATGGAGAGGCTGAAGAAGGAACTTCCACCTCACCAGCCAGGCGCG
CCAGCGGGGCTTAATCTAGAAAACATGGTAGCAGTGGATGCCAAGCTACTAAACGAGCTTATTTGGGCAGTTGGC
TTCCACAACAATAAGACCAAGTAGGGCTGCCAGTGTCCCTTGTGGTGGGCTCAAGAGCGCAAAGGCTGCTCTGGT
GGCATCAAAGAGATGCAGGCTGACGGACGAGGCAGGTATTTGAAGCAGACAGCCGTGTTGCTACGCGACAGGTGG
AAGGGCGATGTGCCGGACACGATTGAGGGACTGGTGTCGCTGCCCGGCGTTGGGCCCAAAATGGCATTTCTGTGC
CTGTCAGCCGCATGGCAGCGGACCGAGGGCATTGGGGTCGACGTGCACGTCCATCGCATCACAAATCTATGGGGG
TGGAACAAGACCAAGGCGCCCGAGGAAACGCGGCTGGCGTTGCAGGCGTGGCTCCCGCGCGACAAGTGGCGCGAT
GTCAACTGGCTGCTCGTGGGCCTCGGCCAGACCATCTGCCTGCCTGTTGGACGGCGGTGCGGCGACTGCGACCTG
GGTCTGCAAGGCCTCTGCAAGTCTGCTGAGCGCAAAAAGGTGGCCCAGGGACGCCGCTTGGACAAGACGGGAAGC
GACGTGGGCATCAAGGTCGAGGAAGCGAAGCGACAAGTCACTGTCAAGCGGGAAGTGGTGGATGCGACGGCGACG
ACGATACGGTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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