Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauG2|4937
Gene name
LocationContig_430:13134..14909
Strand+
Gene length (bp)1775
Transcript length (bp)1419
Coding sequence length (bp)1419
Protein length (aa) 473

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00432 Prenyltrans Prenyltransferase and squalene oxidase repeat 5.8E-05 140 171
PF00432 Prenyltrans Prenyltransferase and squalene oxidase repeat 7.4E-04 186 221
PF00432 Prenyltrans Prenyltransferase and squalene oxidase repeat 2.1E-07 245 283
PF00432 Prenyltrans Prenyltransferase and squalene oxidase repeat 4.3E-07 294 336
PF00432 Prenyltrans Prenyltransferase and squalene oxidase repeat 8.6E-06 363 404

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|O13782|FNTB_SCHPO Protein farnesyltransferase subunit beta OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=cpp1 PE=1 SV=1 46 469 2.0E-79
sp|P49356|FNTB_HUMAN Protein farnesyltransferase subunit beta OS=Homo sapiens GN=FNTB PE=1 SV=1 45 469 3.0E-75
sp|Q02293|FNTB_RAT Protein farnesyltransferase subunit beta OS=Rattus norvegicus GN=Fntb PE=1 SV=1 45 469 9.0E-75
sp|Q8K2I1|FNTB_MOUSE Protein farnesyltransferase subunit beta OS=Mus musculus GN=Fntb PE=1 SV=1 45 469 1.0E-73
sp|P49355|FNTB_BOVIN Protein farnesyltransferase subunit beta OS=Bos taurus GN=FNTB PE=2 SV=1 45 469 3.0E-73
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|O13782|FNTB_SCHPO Protein farnesyltransferase subunit beta OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=cpp1 PE=1 SV=1 46 469 2.0E-79
sp|P49356|FNTB_HUMAN Protein farnesyltransferase subunit beta OS=Homo sapiens GN=FNTB PE=1 SV=1 45 469 3.0E-75
sp|Q02293|FNTB_RAT Protein farnesyltransferase subunit beta OS=Rattus norvegicus GN=Fntb PE=1 SV=1 45 469 9.0E-75
sp|Q8K2I1|FNTB_MOUSE Protein farnesyltransferase subunit beta OS=Mus musculus GN=Fntb PE=1 SV=1 45 469 1.0E-73
sp|P49355|FNTB_BOVIN Protein farnesyltransferase subunit beta OS=Bos taurus GN=FNTB PE=2 SV=1 45 469 3.0E-73
sp|P22007|FNTB_YEAST Protein farnesyltransferase subunit beta OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RAM1 PE=1 SV=2 17 469 8.0E-67
sp|Q04903|FNTB_PEA Protein farnesyltransferase subunit beta OS=Pisum sativum GN=FTB PE=1 SV=1 84 466 4.0E-66
sp|Q38920|FNTB_ARATH Protein farnesyltransferase subunit beta OS=Arabidopsis thaliana GN=FTB PE=1 SV=3 83 410 6.0E-56
sp|Q55D51|FNTB_DICDI Protein farnesyltransferase subunit beta OS=Dictyostelium discoideum GN=fntB PE=3 SV=1 32 409 9.0E-56
sp|O93830|PGTB2_CANAX Geranylgeranyl transferase type-2 subunit beta OS=Candida albicans GN=BET2 PE=3 SV=1 83 409 2.0E-31
sp|Q5E9B3|PGTB2_BOVIN Geranylgeranyl transferase type-2 subunit beta OS=Bos taurus GN=RABGGTB PE=2 SV=1 112 404 1.0E-29
sp|P53611|PGTB2_HUMAN Geranylgeranyl transferase type-2 subunit beta OS=Homo sapiens GN=RABGGTB PE=1 SV=2 112 461 2.0E-29
sp|O80642|PGTB1_ARATH Geranylgeranyl transferase type-1 subunit beta OS=Arabidopsis thaliana GN=GGB PE=1 SV=1 83 404 4.0E-29
sp|P53612|PGTB2_MOUSE Geranylgeranyl transferase type-2 subunit beta OS=Mus musculus GN=Rabggtb PE=1 SV=2 112 404 1.0E-28
sp|Q08603|PGTB2_RAT Geranylgeranyl transferase type-2 subunit beta OS=Rattus norvegicus GN=Rabggtb PE=1 SV=1 112 404 4.0E-28
sp|P46960|PGTB2_SCHPO Geranylgeranyl transferase type-2 subunit beta OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ptb1 PE=3 SV=1 81 407 3.0E-27
sp|B0G172|PGTB2_DICDI Probable geranylgeranyl transferase type-2 subunit beta OS=Dictyostelium discoideum GN=rabggtb PE=3 SV=1 80 404 3.0E-27
sp|P41992|GGTB2_CAEEL Probable geranylgeranyl transferase type-2 subunit beta OS=Caenorhabditis elegans GN=ggtb-1 PE=3 SV=2 80 404 2.0E-26
sp|P20133|PGTB2_YEAST Geranylgeranyl transferase type-2 subunit beta OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=BET2 PE=1 SV=3 77 465 1.0E-22
sp|Q5EAD5|PGTB1_BOVIN Geranylgeranyl transferase type-1 subunit beta OS=Bos taurus GN=PGGT1B PE=2 SV=1 81 404 2.0E-22
sp|P53610|PGTB1_RAT Geranylgeranyl transferase type-1 subunit beta OS=Rattus norvegicus GN=Pggt1b PE=1 SV=1 63 404 3.0E-22
sp|Q8BUY9|PGTB1_MOUSE Geranylgeranyl transferase type-1 subunit beta OS=Mus musculus GN=Pggt1b PE=1 SV=1 63 404 4.0E-22
sp|P53609|PGTB1_HUMAN Geranylgeranyl transferase type-1 subunit beta OS=Homo sapiens GN=PGGT1B PE=1 SV=2 63 404 5.0E-22
sp|P32434|PGTB1_SCHPO Geranylgeranyl transferase type-1 subunit beta OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=cwg2 PE=3 SV=1 80 421 2.0E-17
sp|Q55DA3|PGTB1_DICDI Geranylgeranyl transferase type-1 subunit beta OS=Dictyostelium discoideum GN=pggt1b PE=2 SV=1 83 404 2.0E-10
[Show less]

GO

GO Term Description Terminal node
GO:0003824 catalytic activity Yes
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 23 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauG2|4937
MAAAIDPPSCAASNAPRPRATSQAVTTGLAWDLFSSRQPIRDSLETESSRVQEQTVDACLPLLAGRQEGQGAVNA
QGVPHLLRDRHIKFLHKQLGPLPPQFMSADPSKPWILYWCLNALSLLGQDVATYRSRVAETVRPMQNKSGGFAGG
FGQMSHLATTYAVVLSLCLVGGPDAYQVIERRSMWKWLCSLKQADGGFQMAVGGEEDVRGAYCAAVIISLLNIPL
DLSAQSPARAAGHTHLLSGLGDWVRQCQTFEGGVSAKPGVEAHGAYAFCALGCLSILDSPHRSVAKYLDVARLVS
WLSARQYAPEGGFSGRTNKLVDGCYSHWVGGCWPIIQASLDGPQEAVVPGGSPMQAHDNLFSRNALIRYILCCGQ
DLSKRGGMRDKPGKHSDAYHTCYVLAGLSSAQHKWSLMRPRVDAALMYGDVWTVSPWGPDEQIFDQEDRLCPMNP
VYAIPHDRVQQCQEYFVSKTGF*
Coding >OphauG2|4937
ATGGCCGCAGCCATAGACCCCCCGTCGTGTGCGGCCAGCAACGCGCCCAGGCCCCGTGCAACATCCCAGGCAGTA
ACAACTGGCTTGGCCTGGGACCTCTTCTCGTCAAGGCAGCCCATTCGCGACTCGCTGGAGACGGAGAGCTCCAGG
GTTCAGGAGCAGACAGTGGACGCGTGTCTACCGTTGCTCGCGGGCCGGCAAGAGGGCCAGGGCGCCGTTAACGCG
CAGGGCGTGCCACATTTGCTTCGCGACCGGCACATCAAGTTCTTACACAAGCAGCTTGGCCCGCTACCGCCGCAG
TTCATGTCTGCAGACCCTAGCAAGCCCTGGATCCTGTATTGGTGTCTCAATGCCTTGTCGCTTCTCGGTCAGGAT
GTCGCCACCTATCGCTCGCGAGTTGCGGAGACGGTTCGCCCCATGCAGAACAAGAGTGGAGGATTCGCCGGCGGC
TTTGGCCAGATGTCGCACTTGGCCACTACCTATGCAGTGGTGCTCTCGCTCTGCCTAGTGGGCGGCCCAGACGCT
TACCAAGTAATTGAGCGGAGGAGCATGTGGAAATGGCTGTGCTCGCTCAAGCAAGCCGACGGCGGCTTCCAGATG
GCCGTCGGGGGCGAGGAGGACGTAAGAGGAGCCTACTGCGCGGCTGTCATCATTTCGCTGCTCAACATACCGCTC
GACCTATCAGCCCAGTCTCCTGCACGCGCAGCAGGCCACACGCACCTCTTGAGCGGCCTGGGTGACTGGGTCCGG
CAATGCCAGACCTTTGAGGGGGGAGTGTCGGCAAAGCCGGGCGTCGAGGCCCATGGGGCGTACGCCTTTTGTGCC
TTGGGATGCCTCTCCATCCTGGATTCCCCGCATCGCAGCGTGGCCAAATATCTCGATGTTGCGCGACTTGTTTCC
TGGCTCTCCGCTCGCCAGTACGCACCCGAGGGTGGCTTCTCTGGTCGCACCAACAAGCTGGTTGATGGCTGCTAT
AGCCACTGGGTAGGTGGATGCTGGCCCATCATTCAGGCCAGCCTCGACGGGCCACAAGAGGCCGTCGTGCCAGGC
GGCTCGCCCATGCAAGCTCACGACAATCTTTTCAGCCGAAACGCGCTAATCCGGTATATTCTTTGCTGTGGCCAA
GATCTATCCAAGCGTGGCGGCATGAGAGACAAACCAGGCAAGCATTCCGACGCCTATCATACATGCTACGTGCTT
GCGGGCCTGAGTTCAGCCCAGCACAAGTGGTCTCTGATGCGGCCTCGTGTTGATGCGGCCTTGATGTACGGCGAT
GTGTGGACCGTGTCACCATGGGGCCCAGATGAGCAAATTTTTGACCAAGAGGACCGGCTATGCCCAATGAACCCA
GTATACGCCATTCCCCATGACAGGGTCCAGCAGTGTCAAGAGTACTTTGTCTCCAAGACAGGATTCTAG
Transcript >OphauG2|4937
ATGGCCGCAGCCATAGACCCCCCGTCGTGTGCGGCCAGCAACGCGCCCAGGCCCCGTGCAACATCCCAGGCAGTA
ACAACTGGCTTGGCCTGGGACCTCTTCTCGTCAAGGCAGCCCATTCGCGACTCGCTGGAGACGGAGAGCTCCAGG
GTTCAGGAGCAGACAGTGGACGCGTGTCTACCGTTGCTCGCGGGCCGGCAAGAGGGCCAGGGCGCCGTTAACGCG
CAGGGCGTGCCACATTTGCTTCGCGACCGGCACATCAAGTTCTTACACAAGCAGCTTGGCCCGCTACCGCCGCAG
TTCATGTCTGCAGACCCTAGCAAGCCCTGGATCCTGTATTGGTGTCTCAATGCCTTGTCGCTTCTCGGTCAGGAT
GTCGCCACCTATCGCTCGCGAGTTGCGGAGACGGTTCGCCCCATGCAGAACAAGAGTGGAGGATTCGCCGGCGGC
TTTGGCCAGATGTCGCACTTGGCCACTACCTATGCAGTGGTGCTCTCGCTCTGCCTAGTGGGCGGCCCAGACGCT
TACCAAGTAATTGAGCGGAGGAGCATGTGGAAATGGCTGTGCTCGCTCAAGCAAGCCGACGGCGGCTTCCAGATG
GCCGTCGGGGGCGAGGAGGACGTAAGAGGAGCCTACTGCGCGGCTGTCATCATTTCGCTGCTCAACATACCGCTC
GACCTATCAGCCCAGTCTCCTGCACGCGCAGCAGGCCACACGCACCTCTTGAGCGGCCTGGGTGACTGGGTCCGG
CAATGCCAGACCTTTGAGGGGGGAGTGTCGGCAAAGCCGGGCGTCGAGGCCCATGGGGCGTACGCCTTTTGTGCC
TTGGGATGCCTCTCCATCCTGGATTCCCCGCATCGCAGCGTGGCCAAATATCTCGATGTTGCGCGACTTGTTTCC
TGGCTCTCCGCTCGCCAGTACGCACCCGAGGGTGGCTTCTCTGGTCGCACCAACAAGCTGGTTGATGGCTGCTAT
AGCCACTGGGTAGGTGGATGCTGGCCCATCATTCAGGCCAGCCTCGACGGGCCACAAGAGGCCGTCGTGCCAGGC
GGCTCGCCCATGCAAGCTCACGACAATCTTTTCAGCCGAAACGCGCTAATCCGGTATATTCTTTGCTGTGGCCAA
GATCTATCCAAGCGTGGCGGCATGAGAGACAAACCAGGCAAGCATTCCGACGCCTATCATACATGCTACGTGCTT
GCGGGCCTGAGTTCAGCCCAGCACAAGTGGTCTCTGATGCGGCCTCGTGTTGATGCGGCCTTGATGTACGGCGAT
GTGTGGACCGTGTCACCATGGGGCCCAGATGAGCAAATTTTTGACCAAGAGGACCGGCTATGCCCAATGAACCCA
GTATACGCCATTCCCCATGACAGGGTCCAGCAGTGTCAAGAGTACTTTGTCTCCAAGACAGGATTCTAG
Gene >OphauG2|4937
ATGGCCGCAGCCATAGACCCCCCGTCGTGTGCGGCCAGCAACGCGCCCAGGCCCCGTGCAACATCCCAGGCAGTA
ACAACTGGCTTGGCCTGGGACCTCTTCTCGTCAAGGCAGCCCATTCGCGACTCGCTGGAGACGGAGAGCTCCAGG
GTTCAGGAGCAGACAGTGGACGCGTGTCTACCGTTGCTCGCGGGCCGGCAAGAGGGCCAGGGCGCCGTTAACGCG
CAGGGCGTGCCACATTTGCTTCGCGACCGGCACATCAAGTTCTTACACAAGCAGCTTGGCCCGCTACCGCCGCAG
TTCATGTCTGCAGACCCTAGCAAGCCCTGGATCCTGTATTGGTGTCTCAATGCCTTGTCGCTTCTCGGTCAGGAT
GTCGCCACCTATCGCTCGCGAGTTGCGGAGACGGTTCGCCCCATGCAGAACAAGAGTGGAGGATTCGCCGGCGGC
TTTGGCCAGATGTCGCACTTGGCCACTACCTATGCAGTGGTGCTCTCGCTCTGCCTAGTGGGCGGCCCAGACGCT
TACCAAGTAATTGAGCGGAGGAGCATGTGGAAATGGCTGTGCTCGCTCAAGCAAGCCGACGGCGGCTTCCAGATG
GCCGTCGGGGGCGAGGAGGACGTAAGGTGGGTTTGCCTGCCTCAGACAGGGCAAGACACCTCAACAATCTGACAA
GATGGCTCTTTCAGAGGAGCCTACTGCGCGGCTGTCATCATTTCGCTGCTCAACATACCGCTCGACCTATCAGCC
CAGTCTCCTGCACGCGCAGCAGGCCACACGCACCTCTTGAGCGGCCTGGGTGACTGGGTCCGGCAATGTACGTTT
CTCCCCACCCGCCCCGAGGCGCGACGAGGGGACATGGGCACGGGCACGTCGTACCTTGTCCACGTTGGCTCTCTC
TTTCTGATTGTTCCCCCATGCAGGCCAGACCTTTGAGGGGGGAGTGTCGGCAAAGCCGGGCGTCGAGGCCCATGG
GGCGTACGCCTTTTGTGCCTTGGGATGCCTCTCCATCCTGGATTCCCCGCATCGCAGCGTGGCCAAGTGAGTCGT
CGCCTCGAAGCCTTGAGAGCAGCAGAGGGGAGACAAGGGGTGTATGAGTGAAGGGATACGAATGTGTGTGTGCTC
ATGTAGCTGCATGTCGCTGACCAGTGAGCTCCTTGCTCCTCCGGACAGATATCTCGATGTTGCGCGACTTGTTTC
CTGGCTCTCCGCTCGCCAGTACGCACCCGAGGGTGGCTTCTCTGGTCGCACCAACAAGCTGGTTGATGGCTGCTA
TAGCCACTGGGTAGGTGGATGCTGGCCCATCATTCAGGCCAGCCTCGACGGGCCACAAGAGGCCGTCGTGCCAGG
CGGCTCGCCCATGCAAGCTCACGACAATCTTTTCAGCCGAAACGCGCTAATCCGGTATATTCTTTGCTGTGGCCA
AGATCTATCCAAGCGTGGCGGCATGAGAGACAAACCAGGCAAGTAAGTTGATGCAACAGCTGGCCTACCTCTTTG
ACTTGGCACTCATGCTCCCCAGGCATTCCGACGCCTATCATACATGCTACGTGCTTGCGGGCCTGAGTTCAGCCC
AGCACAAGTGGTCTCTGATGCGGCCTCGTGTTGATGCGGCCTTGATGTACGGCGATGTGTGGACCGTGTCACCAT
GGGGCCCAGATGAGCAAATTTTTGACCAAGAGGACCGGCTATGCCCAATGAACCCAGTATACGCCATTCCCCATG
ACAGGGTCCAGCAGTGTCAAGAGTACTTTGTCTCCAAGACAGGATTCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail