© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauG2|4920 |
| Gene name | |
| Location | Contig_429:10500..12141 |
| Strand | - |
| Gene length (bp) | 1641 |
| Transcript length (bp) | 1641 |
| Coding sequence length (bp) | 1641 |
| Protein length (aa) | 547 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF08704 | GCD14 | tRNA methyltransferase complex GCD14 subunit | 7.7E-65 | 183 | 486 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q2U3W4|TRM61_ASPOR | tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit trm61 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=trm61 PE=3 SV=1 | 71 | 536 | 9.0E-143 |
| sp|Q4WUT7|TRM61_ASPFU | tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit trm61 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=trm61 PE=3 SV=1 | 70 | 546 | 7.0E-139 |
| sp|Q5A416|TRM61_CANAL | tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRM61 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=TRM61 PE=3 SV=1 | 73 | 486 | 3.0E-70 |
| sp|Q6CN53|TRM61_KLULA | tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRM61 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=TRM61 PE=3 SV=1 | 71 | 496 | 4.0E-70 |
| sp|Q6BX32|TRM61_DEBHA | tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRM61 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=TRM61 PE=3 SV=2 | 85 | 487 | 2.0E-68 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q2U3W4|TRM61_ASPOR | tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit trm61 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=trm61 PE=3 SV=1 | 71 | 536 | 9.0E-143 |
| sp|Q4WUT7|TRM61_ASPFU | tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit trm61 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=trm61 PE=3 SV=1 | 70 | 546 | 7.0E-139 |
| sp|Q5A416|TRM61_CANAL | tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRM61 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=TRM61 PE=3 SV=1 | 73 | 486 | 3.0E-70 |
| sp|Q6CN53|TRM61_KLULA | tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRM61 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=TRM61 PE=3 SV=1 | 71 | 496 | 4.0E-70 |
| sp|Q6BX32|TRM61_DEBHA | tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRM61 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=TRM61 PE=3 SV=2 | 85 | 487 | 2.0E-68 |
| sp|P46959|TRM61_YEAST | tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRM61 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GCD14 PE=1 SV=1 | 81 | 500 | 4.0E-67 |
| sp|Q6FL77|TRM61_CANGA | tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRM61 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=TRM61 PE=3 SV=1 | 85 | 485 | 4.0E-67 |
| sp|O14307|TRM61_SCHPO | tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit trm61 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=cpd1 PE=3 SV=1 | 79 | 490 | 5.0E-64 |
| sp|Q6C0P9|TRM61_YARLI | tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRM61 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=TRM61 PE=3 SV=1 | 85 | 485 | 2.0E-63 |
| sp|Q755M8|TRM61_ASHGO | tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRM61 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=TRM61 PE=3 SV=1 | 85 | 485 | 3.0E-60 |
| sp|P0CS08|TRM61_CRYNJ | tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRM61 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=TRM61 PE=3 SV=1 | 72 | 490 | 1.0E-51 |
| sp|P0CS09|TRM61_CRYNB | tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRM61 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN=TRM61 PE=3 SV=1 | 72 | 490 | 1.0E-51 |
| sp|Q80XC2|TRM61_MOUSE | tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A OS=Mus musculus GN=Trmt61a PE=1 SV=1 | 167 | 385 | 2.0E-37 |
| sp|A6H791|TRM61_BOVIN | tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A OS=Bos taurus GN=TRMT61A PE=2 SV=1 | 167 | 385 | 6.0E-37 |
| sp|Q6AY46|TRM61_RAT | tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A OS=Rattus norvegicus GN=Trmt61a PE=2 SV=1 | 167 | 385 | 1.0E-36 |
| sp|Q96FX7|TRM61_HUMAN | tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A OS=Homo sapiens GN=TRMT61A PE=1 SV=1 | 167 | 385 | 1.0E-36 |
| sp|Q86JJ0|TRM61_DICDI | tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit trmt61a OS=Dictyostelium discoideum GN=trmt61a PE=1 SV=1 | 74 | 383 | 3.0E-29 |
| sp|P9WFZ1|TRMI_MYCTU | tRNA (adenine(58)-N(1))-methyltransferase TrmI OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=trmI PE=1 SV=1 | 177 | 321 | 1.0E-07 |
| sp|P9WFZ0|TRMI_MYCTO | tRNA (adenine(58)-N(1))-methyltransferase TrmI OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=trmI PE=3 SV=1 | 177 | 321 | 1.0E-07 |
| sp|Q9V1J7|TRMI_PYRAB | tRNA (adenine(57)-N(1)/adenine(58)-N(1))-methyltransferase TrmI OS=Pyrococcus abyssi (strain GE5 / Orsay) GN=trmI PE=1 SV=1 | 187 | 368 | 3.0E-07 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016429 | tRNA (adenine-N1-)-methyltransferase activity | Yes |
| GO:0030488 | tRNA methylation | Yes |
| GO:0031515 | tRNA (m1A) methyltransferase complex | Yes |
| GO:0034470 | ncRNA processing | No |
| GO:0140098 | catalytic activity, acting on RNA | No |
| GO:0046483 | heterocycle metabolic process | No |
| GO:0005575 | cellular_component | No |
| GO:0034660 | ncRNA metabolic process | No |
| GO:0006396 | RNA processing | No |
| GO:0009451 | RNA modification | No |
| GO:0043412 | macromolecule modification | No |
| GO:0006400 | tRNA modification | No |
| GO:0032991 | protein-containing complex | No |
| GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | No |
| GO:0006399 | tRNA metabolic process | No |
| GO:0008152 | metabolic process | No |
| GO:0008150 | biological_process | No |
| GO:0008175 | tRNA methyltransferase activity | No |
| GO:0001510 | RNA methylation | No |
| GO:0016741 | transferase activity, transferring one-carbon groups | No |
| GO:0044238 | primary metabolic process | No |
| GO:0034708 | methyltransferase complex | No |
| GO:0140101 | catalytic activity, acting on a tRNA | No |
| GO:0008173 | RNA methyltransferase activity | No |
| GO:0140640 | catalytic activity, acting on a nucleic acid | No |
| GO:0090304 | nucleic acid metabolic process | No |
| GO:0034641 | cellular nitrogen compound metabolic process | No |
| GO:0006725 | cellular aromatic compound metabolic process | No |
| GO:0016070 | RNA metabolic process | No |
| GO:0003824 | catalytic activity | No |
| GO:0044237 | cellular metabolic process | No |
| GO:0044260 | cellular macromolecule metabolic process | No |
| GO:0006139 | nucleobase-containing compound metabolic process | No |
| GO:1902494 | catalytic complex | No |
| GO:0003674 | molecular_function | No |
| GO:0032259 | methylation | No |
| GO:0043414 | macromolecule methylation | No |
| GO:0008033 | tRNA processing | No |
| GO:0043527 | tRNA methyltransferase complex | No |
| GO:0016740 | transferase activity | No |
| GO:0016426 | tRNA (adenine) methyltransferase activity | No |
| GO:1990234 | transferase complex | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0006807 | nitrogen compound metabolic process | No |
| GO:0043170 | macromolecule metabolic process | No |
| GO:0008168 | methyltransferase activity | No |
| GO:0009987 | cellular process | No |
| GO:1901360 | organic cyclic compound metabolic process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 21 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 12 | 34 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauG2|4920 MGTAGTTAAAAAANTAAVAATAVAATAATAAIAATAIPAAATAATPAATTADAANPAATPAATPAATSNASPFLQ PGLKTKTNSLAIASLSRDNLQPIILEQSTSAVDGYAEGATLNTRFGSFPHSTLLDIAWGSQVRASVVDTGSRGRK RRRDDDTPTPSQDEREDSQGQKAVAKAVAASSGFIYILRPTPELWTSSLPHRTQVVYTPDYSYILQRIRARPGTR IIEAGAGSGSFTHAAARAVYNGPHAKEGKVFSFEFHEPRFHTMQQEIRSHGLEGVVHMTHRDVYQDGFLVHGKSP EATAVFLDLPAPWKALQHLTRPAQGTSNGQDGLEEWESALDRHQSVHICTFSPCIEQVTRTVAELRALGWTDVDM VEIAHKRYSVMRDGMGGGLLNDKGAGSAPADVEEAVEKLKKDLKRTHNFHQKGQQLQSKGESGLDAMDTDVTRCQ EWASKEEAEPYFLQGRLVHRAETELKTHTSYLVFAVLPAEWTADAEAAAQAKWPCGMEQRTIGNLDKESRKQEKR ELLEMGKRKRKRHDATARSHD* |
| Coding | >OphauG2|4920 ATGGGCACCGCAGGCACTACTGCTGCTGCTGCTGCTGCTAATACTGCTGCTGTCGCTGCTACTGCTGTTGCTGCT ACTGCTGCTACTGCTGCTATTGCTGCTACTGCTATTCCTGCTGCTGCTACTGCTGCTACTCCCGCTGCCACTACC GCTGATGCTGCTAATCCTGCTGCTACTCCTGCTGCTACTCCTGCTGCTACTTCTAATGCTTCGCCATTTTTACAA CCAGGCCTGAAAACAAAAACAAACTCATTGGCCATTGCCAGTCTATCGCGCGACAATCTCCAGCCAATTATTCTC GAGCAGTCAACCAGCGCCGTCGACGGATACGCCGAAGGCGCTACTCTCAACACGCGATTCGGCTCCTTTCCGCAC TCAACGCTGCTCGACATTGCCTGGGGCTCTCAGGTTCGTGCATCTGTCGTTGACACGGGCTCAAGAGGCCGCAAA CGCAGGCGTGATGACGACACGCCCACGCCCAGCCAGGACGAAAGAGAAGATAGTCAGGGTCAGAAAGCAGTGGCC AAGGCGGTTGCCGCATCAAGCGGCTTCATCTATATCCTCCGCCCGACGCCCGAGCTTTGGACCAGCAGCTTGCCA CATCGGACACAGGTGGTATACACGCCCGACTATAGCTACATTCTTCAAAGAATCAGAGCCAGGCCTGGAACAAGG ATAATCGAAGCCGGTGCTGGAAGCGGAAGCTTCACACATGCCGCGGCGCGAGCAGTTTATAATGGACCCCACGCT AAAGAGGGCAAGGTGTTTAGCTTCGAATTCCACGAGCCTCGCTTTCATACAATGCAACAAGAAATCCGCAGTCAC GGGCTCGAGGGTGTGGTGCACATGACACACAGAGACGTCTACCAAGACGGCTTCTTGGTCCATGGCAAGTCTCCC GAGGCAACGGCCGTTTTTCTCGATTTGCCCGCGCCATGGAAGGCACTGCAGCATTTGACAAGGCCAGCACAAGGA ACCTCGAATGGCCAAGATGGGCTGGAAGAATGGGAGTCAGCGTTGGACCGCCACCAGAGTGTGCATATTTGCACC TTTTCCCCTTGCATTGAGCAAGTAACTCGGACTGTGGCAGAGCTTCGAGCCCTGGGCTGGACAGACGTCGACATG GTAGAGATTGCACATAAGCGCTACAGCGTAATGCGAGATGGCATGGGTGGCGGCTTGCTCAATGATAAGGGGGCC GGCTCGGCACCAGCAGATGTCGAGGAAGCTGTCGAGAAGCTCAAGAAGGACTTGAAGAGAACACACAATTTCCAT CAAAAGGGGCAGCAACTACAGTCCAAGGGTGAATCAGGCCTAGATGCCATGGACACTGATGTGACAAGGTGCCAA GAATGGGCCAGCAAGGAGGAAGCGGAGCCTTATTTTCTGCAGGGCCGCCTTGTACATCGAGCCGAGACGGAGCTC AAGACGCACACGTCGTATCTCGTTTTTGCTGTCTTGCCGGCTGAATGGACGGCCGACGCAGAGGCTGCGGCCCAG GCCAAGTGGCCATGCGGAATGGAACAAAGGACGATTGGAAATCTAGACAAGGAGTCACGGAAACAGGAGAAACGC GAGCTACTGGAAATGGGCAAGAGGAAAAGGAAACGACACGATGCAACAGCAAGGAGCCATGACTAG |
| Transcript | >OphauG2|4920 ATGGGCACCGCAGGCACTACTGCTGCTGCTGCTGCTGCTAATACTGCTGCTGTCGCTGCTACTGCTGTTGCTGCT ACTGCTGCTACTGCTGCTATTGCTGCTACTGCTATTCCTGCTGCTGCTACTGCTGCTACTCCCGCTGCCACTACC GCTGATGCTGCTAATCCTGCTGCTACTCCTGCTGCTACTCCTGCTGCTACTTCTAATGCTTCGCCATTTTTACAA CCAGGCCTGAAAACAAAAACAAACTCATTGGCCATTGCCAGTCTATCGCGCGACAATCTCCAGCCAATTATTCTC GAGCAGTCAACCAGCGCCGTCGACGGATACGCCGAAGGCGCTACTCTCAACACGCGATTCGGCTCCTTTCCGCAC TCAACGCTGCTCGACATTGCCTGGGGCTCTCAGGTTCGTGCATCTGTCGTTGACACGGGCTCAAGAGGCCGCAAA CGCAGGCGTGATGACGACACGCCCACGCCCAGCCAGGACGAAAGAGAAGATAGTCAGGGTCAGAAAGCAGTGGCC AAGGCGGTTGCCGCATCAAGCGGCTTCATCTATATCCTCCGCCCGACGCCCGAGCTTTGGACCAGCAGCTTGCCA CATCGGACACAGGTGGTATACACGCCCGACTATAGCTACATTCTTCAAAGAATCAGAGCCAGGCCTGGAACAAGG ATAATCGAAGCCGGTGCTGGAAGCGGAAGCTTCACACATGCCGCGGCGCGAGCAGTTTATAATGGACCCCACGCT AAAGAGGGCAAGGTGTTTAGCTTCGAATTCCACGAGCCTCGCTTTCATACAATGCAACAAGAAATCCGCAGTCAC GGGCTCGAGGGTGTGGTGCACATGACACACAGAGACGTCTACCAAGACGGCTTCTTGGTCCATGGCAAGTCTCCC GAGGCAACGGCCGTTTTTCTCGATTTGCCCGCGCCATGGAAGGCACTGCAGCATTTGACAAGGCCAGCACAAGGA ACCTCGAATGGCCAAGATGGGCTGGAAGAATGGGAGTCAGCGTTGGACCGCCACCAGAGTGTGCATATTTGCACC TTTTCCCCTTGCATTGAGCAAGTAACTCGGACTGTGGCAGAGCTTCGAGCCCTGGGCTGGACAGACGTCGACATG GTAGAGATTGCACATAAGCGCTACAGCGTAATGCGAGATGGCATGGGTGGCGGCTTGCTCAATGATAAGGGGGCC GGCTCGGCACCAGCAGATGTCGAGGAAGCTGTCGAGAAGCTCAAGAAGGACTTGAAGAGAACACACAATTTCCAT CAAAAGGGGCAGCAACTACAGTCCAAGGGTGAATCAGGCCTAGATGCCATGGACACTGATGTGACAAGGTGCCAA GAATGGGCCAGCAAGGAGGAAGCGGAGCCTTATTTTCTGCAGGGCCGCCTTGTACATCGAGCCGAGACGGAGCTC AAGACGCACACGTCGTATCTCGTTTTTGCTGTCTTGCCGGCTGAATGGACGGCCGACGCAGAGGCTGCGGCCCAG GCCAAGTGGCCATGCGGAATGGAACAAAGGACGATTGGAAATCTAGACAAGGAGTCACGGAAACAGGAGAAACGC GAGCTACTGGAAATGGGCAAGAGGAAAAGGAAACGACACGATGCAACAGCAAGGAGCCATGACTAG |
| Gene | >OphauG2|4920 ATGGGCACCGCAGGCACTACTGCTGCTGCTGCTGCTGCTAATACTGCTGCTGTCGCTGCTACTGCTGTTGCTGCT ACTGCTGCTACTGCTGCTATTGCTGCTACTGCTATTCCTGCTGCTGCTACTGCTGCTACTCCCGCTGCCACTACC GCTGATGCTGCTAATCCTGCTGCTACTCCTGCTGCTACTCCTGCTGCTACTTCTAATGCTTCGCCATTTTTACAA CCAGGCCTGAAAACAAAAACAAACTCATTGGCCATTGCCAGTCTATCGCGCGACAATCTCCAGCCAATTATTCTC GAGCAGTCAACCAGCGCCGTCGACGGATACGCCGAAGGCGCTACTCTCAACACGCGATTCGGCTCCTTTCCGCAC TCAACGCTGCTCGACATTGCCTGGGGCTCTCAGGTTCGTGCATCTGTCGTTGACACGGGCTCAAGAGGCCGCAAA CGCAGGCGTGATGACGACACGCCCACGCCCAGCCAGGACGAAAGAGAAGATAGTCAGGGTCAGAAAGCAGTGGCC AAGGCGGTTGCCGCATCAAGCGGCTTCATCTATATCCTCCGCCCGACGCCCGAGCTTTGGACCAGCAGCTTGCCA CATCGGACACAGGTGGTATACACGCCCGACTATAGCTACATTCTTCAAAGAATCAGAGCCAGGCCTGGAACAAGG ATAATCGAAGCCGGTGCTGGAAGCGGAAGCTTCACACATGCCGCGGCGCGAGCAGTTTATAATGGACCCCACGCT AAAGAGGGCAAGGTGTTTAGCTTCGAATTCCACGAGCCTCGCTTTCATACAATGCAACAAGAAATCCGCAGTCAC GGGCTCGAGGGTGTGGTGCACATGACACACAGAGACGTCTACCAAGACGGCTTCTTGGTCCATGGCAAGTCTCCC GAGGCAACGGCCGTTTTTCTCGATTTGCCCGCGCCATGGAAGGCACTGCAGCATTTGACAAGGCCAGCACAAGGA ACCTCGAATGGCCAAGATGGGCTGGAAGAATGGGAGTCAGCGTTGGACCGCCACCAGAGTGTGCATATTTGCACC TTTTCCCCTTGCATTGAGCAAGTAACTCGGACTGTGGCAGAGCTTCGAGCCCTGGGCTGGACAGACGTCGACATG GTAGAGATTGCACATAAGCGCTACAGCGTAATGCGAGATGGCATGGGTGGCGGCTTGCTCAATGATAAGGGGGCC GGCTCGGCACCAGCAGATGTCGAGGAAGCTGTCGAGAAGCTCAAGAAGGACTTGAAGAGAACACACAATTTCCAT CAAAAGGGGCAGCAACTACAGTCCAAGGGTGAATCAGGCCTAGATGCCATGGACACTGATGTGACAAGGTGCCAA GAATGGGCCAGCAAGGAGGAAGCGGAGCCTTATTTTCTGCAGGGCCGCCTTGTACATCGAGCCGAGACGGAGCTC AAGACGCACACGTCGTATCTCGTTTTTGCTGTCTTGCCGGCTGAATGGACGGCCGACGCAGAGGCTGCGGCCCAG GCCAAGTGGCCATGCGGAATGGAACAAAGGACGATTGGAAATCTAGACAAGGAGTCACGGAAACAGGAGAAACGC GAGCTACTGGAAATGGGCAAGAGGAAAAGGAAACGACACGATGCAACAGCAAGGAGCCATGACTAG |