Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauG2|4906
Gene name
LocationContig_427:2616..5133
Strand-
Gene length (bp)2517
Transcript length (bp)2310
Coding sequence length (bp)2310
Protein length (aa) 770

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04082 Fungal_trans Fungal specific transcription factor domain 9.3E-17 258 475
PF00172 Zn_clus Fungal Zn(2)-Cys(6) binuclear cluster domain 8.6E-08 67 103

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q1MTM9|YFN1_SCHPO Uncharacterized transcriptional regulatory protein C1327.01c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1327.01c PE=1 SV=2 246 564 4.0E-09
sp|P11638|QA1F_NEUCR Quinic acid utilization activator OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=qa-1f PE=3 SV=2 53 281 5.0E-08
sp|P40971|LYS14_YEAST Lysine biosynthesis regulatory protein LYS14 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=LYS14 PE=1 SV=2 21 107 9.0E-06

GO

GO Term Description Terminal node
GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific Yes
GO:0006355 regulation of transcription, DNA-templated Yes
GO:0003677 DNA binding Yes
GO:0006351 transcription, DNA-templated Yes
GO:0008270 zinc ion binding Yes
GO:0009059 macromolecule biosynthetic process No
GO:0046483 heterocycle metabolic process No
GO:1901576 organic substance biosynthetic process No
GO:0018130 heterocycle biosynthetic process No
GO:0009058 biosynthetic process No
GO:0008152 metabolic process No
GO:0031323 regulation of cellular metabolic process No
GO:0008150 biological_process No
GO:0080090 regulation of primary metabolic process No
GO:0060255 regulation of macromolecule metabolic process No
GO:1903506 regulation of nucleic acid-templated transcription No
GO:0010468 regulation of gene expression No
GO:0019219 regulation of nucleobase-containing compound metabolic process No
GO:0050789 regulation of biological process No
GO:0044238 primary metabolic process No
GO:1901363 heterocyclic compound binding No
GO:0046872 metal ion binding No
GO:0003676 nucleic acid binding No
GO:0034654 nucleobase-containing compound biosynthetic process No
GO:0043167 ion binding No
GO:1901362 organic cyclic compound biosynthetic process No
GO:2001141 regulation of RNA biosynthetic process No
GO:0019222 regulation of metabolic process No
GO:0050794 regulation of cellular process No
GO:0032774 RNA biosynthetic process No
GO:0051171 regulation of nitrogen compound metabolic process No
GO:0031326 regulation of cellular biosynthetic process No
GO:1901360 organic cyclic compound metabolic process No
GO:0034641 cellular nitrogen compound metabolic process No
GO:0097659 nucleic acid-templated transcription No
GO:0006725 cellular aromatic compound metabolic process No
GO:0016070 RNA metabolic process No
GO:0051252 regulation of RNA metabolic process No
GO:0043169 cation binding No
GO:0044237 cellular metabolic process No
GO:0006139 nucleobase-containing compound metabolic process No
GO:0097159 organic cyclic compound binding No
GO:0003700 DNA-binding transcription factor activity No
GO:0010556 regulation of macromolecule biosynthetic process No
GO:0009889 regulation of biosynthetic process No
GO:0003674 molecular_function No
GO:0090304 nucleic acid metabolic process No
GO:0046914 transition metal ion binding No
GO:0044249 cellular biosynthetic process No
GO:0044271 cellular nitrogen compound biosynthetic process No
GO:0019438 aromatic compound biosynthetic process No
GO:0071704 organic substance metabolic process No
GO:0005488 binding No
GO:0006807 nitrogen compound metabolic process No
GO:0065007 biological regulation No
GO:0043170 macromolecule metabolic process No
GO:0009987 cellular process No
GO:0140110 transcription regulator activity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 25 0.45

Transmembrane Domains

(None)

Transcription Factor Class

Transcription Factor Class
(based on PFAM domains)
Fungal Specific TF

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauG2|4906
MSDGNGRQEEMVVDQATDARPACAAEDEANSMPSNDEGGSSDDDTAHMGPASAGSKRKRTTPKYQKTSCELCKAR
KVKCDRAEPACSWCARHNRNCVYLERQKPGSRIGFTLELESKVNRVDALLQTLWRRVEDHIAHDHPHNNSHHLPR
PQTLSPAVSSSNDGLLPPPSDLARTQLRPSATPLSHASFSSPSWRGPDSHHDGLRVSSSAGPRTLTCATNPPLMA
AAPDAPPSLLWHSASLPGGPDLPPHDMVYTLVDLYFKHCNTWCPILDRKSTFGAFFGSTSLVEVDRILLHAIVAT
TLRFLHDPRLTPDARARQHAISKQVIMTYATEHVNIAALKALVILALDELGTSNGPRGWNLLSLLAQNVRHLGLC
NETRTYLSATPQDLPHTASTRRVAVGPPESWIEDEGRRRLCWMVYLLDRYATVATTFDFSLDDNAMRRLLPCSYD
LFSRNVPVETRSVNFCDQDSQHGQHVDRPENLGSFSHHCEMLRILSRVHNFLKVPIDHSTAMGMTGWRRTYRSLD
AALDSWLQGLPSEYSRISALCHSDPASRVANWFMLHSAYVTSVVRLHSAAAYPSVRSPLMPPSHYAMQRCLSAVQ
SLRDITQDVYEANGLDLLGPPFAFALWVAARLLVVHAAAVGCPVDAKVDFFIDMLSYVGQYWEVATKYARILARV
VERGRQGDMTSFWAMRRAAHDLVNLSAESRQSVLEEPSCKAVELSELDGIDVFDFFNYPKMTRLGAPPHVGAMVQ
PQGLPDPESDWLGYGSSFD*
Coding >OphauG2|4906
ATGTCCGACGGCAATGGCCGCCAAGAAGAAATGGTGGTAGACCAAGCGACTGATGCGCGGCCGGCATGCGCAGCC
GAGGATGAGGCCAACTCGATGCCGAGCAACGACGAGGGCGGGTCGAGCGATGATGACACGGCGCACATGGGGCCC
GCCTCGGCCGGCAGCAAGAGGAAACGGACAACGCCCAAGTATCAGAAGACATCATGCGAGCTGTGCAAGGCCCGC
AAGGTCAAGTGCGATCGAGCTGAGCCGGCCTGTTCATGGTGCGCTCGCCACAACCGCAACTGTGTCTATCTCGAG
AGGCAGAAGCCTGGCAGCCGCATCGGCTTCACCCTCGAGCTCGAGTCCAAGGTGAACCGCGTCGACGCCCTGCTG
CAGACCCTGTGGCGCCGCGTCGAGGACCACATTGCCCACGACCATCCTCACAACAACTCTCATCATCTCCCTCGG
CCCCAGACACTGTCGCCCGCCGTCAGTAGCAGCAACGATGGCCTACTTCCGCCCCCCTCAGACCTGGCCAGGACT
CAGCTGAGGCCCAGTGCCACCCCTCTCTCCCATGCCTCCTTCTCCAGCCCCTCGTGGCGCGGCCCCGACAGCCAC
CACGACGGCCTTCGAGTCTCGTCTTCTGCTGGCCCAAGGACCTTGACCTGCGCCACTAATCCGCCTCTCATGGCC
GCTGCCCCCGATGCCCCCCCATCCCTCCTCTGGCACTCGGCCTCACTGCCAGGAGGCCCTGATCTCCCCCCACAT
GACATGGTCTACACTCTTGTTGATCTCTACTTCAAACACTGCAACACATGGTGTCCCATTCTCGACCGCAAGTCT
ACTTTTGGAGCCTTTTTTGGCTCCACCTCCCTGGTCGAAGTGGACCGCATCCTACTCCATGCCATTGTCGCCACC
ACGCTGCGCTTCTTGCACGACCCGCGCCTGACGCCAGACGCCCGGGCTCGTCAACATGCAATCTCCAAGCAGGTC
ATCATGACGTATGCCACGGAACACGTCAACATTGCAGCACTCAAGGCGCTTGTCATTCTCGCCCTTGACGAACTG
GGCACCTCGAATGGCCCGCGCGGATGGAACCTGCTGTCTTTGCTGGCCCAGAATGTCCGCCACCTCGGGCTCTGC
AACGAGACGCGCACATATCTATCCGCCACGCCCCAGGACCTGCCCCACACCGCTTCTACCCGCAGAGTCGCCGTT
GGGCCTCCCGAGTCGTGGATCGAGGACGAGGGCCGCCGACGCCTTTGCTGGATGGTCTATCTGCTGGACCGGTAC
GCAACCGTGGCGACAACGTTTGATTTTAGTCTCGACGACAATGCAATGCGTCGCTTGCTGCCCTGCTCATACGAC
TTGTTCTCGCGCAACGTGCCCGTTGAGACGCGATCCGTCAATTTCTGCGACCAAGACTCCCAGCACGGCCAGCAC
GTCGACCGTCCCGAGAACCTGGGCAGCTTTTCGCATCACTGCGAAATGCTTCGAATTCTCAGTCGCGTCCACAAC
TTCCTCAAGGTGCCCATTGACCACTCGACGGCCATGGGCATGACGGGATGGCGCCGCACCTATCGCTCGCTCGAT
GCAGCTCTCGACAGCTGGTTGCAAGGCCTGCCAAGCGAGTACAGCCGCATATCCGCCCTCTGCCACTCAGACCCG
GCTAGCCGAGTGGCCAATTGGTTTATGCTGCACAGCGCCTATGTCACCTCGGTTGTTCGTCTACATTCGGCTGCA
GCCTATCCCAGTGTACGGTCGCCGCTGATGCCGCCCTCTCACTACGCCATGCAACGCTGCCTCTCGGCCGTCCAA
AGCCTGCGCGACATTACCCAGGATGTCTACGAGGCCAACGGGCTTGACCTCTTGGGTCCTCCATTTGCCTTTGCG
CTTTGGGTAGCGGCGCGCCTGCTAGTGGTGCATGCGGCTGCCGTTGGCTGTCCAGTCGACGCCAAAGTCGACTTC
TTCATCGACATGCTAAGCTACGTCGGCCAGTACTGGGAAGTGGCAACCAAGTATGCGCGCATTCTTGCCCGGGTT
GTTGAACGCGGGCGCCAGGGCGACATGACGAGCTTTTGGGCAATGAGAAGAGCGGCCCATGATTTGGTCAATCTC
AGCGCCGAGTCGCGGCAATCGGTGCTTGAGGAACCGTCATGCAAAGCCGTTGAGCTCAGTGAGCTCGACGGCATC
GACGTCTTTGACTTTTTCAACTATCCCAAGATGACGAGGCTAGGCGCACCGCCGCACGTCGGGGCCATGGTGCAA
CCACAGGGCTTACCCGATCCCGAGTCTGACTGGCTTGGCTACGGCTCATCCTTTGACTGA
Transcript >OphauG2|4906
ATGTCCGACGGCAATGGCCGCCAAGAAGAAATGGTGGTAGACCAAGCGACTGATGCGCGGCCGGCATGCGCAGCC
GAGGATGAGGCCAACTCGATGCCGAGCAACGACGAGGGCGGGTCGAGCGATGATGACACGGCGCACATGGGGCCC
GCCTCGGCCGGCAGCAAGAGGAAACGGACAACGCCCAAGTATCAGAAGACATCATGCGAGCTGTGCAAGGCCCGC
AAGGTCAAGTGCGATCGAGCTGAGCCGGCCTGTTCATGGTGCGCTCGCCACAACCGCAACTGTGTCTATCTCGAG
AGGCAGAAGCCTGGCAGCCGCATCGGCTTCACCCTCGAGCTCGAGTCCAAGGTGAACCGCGTCGACGCCCTGCTG
CAGACCCTGTGGCGCCGCGTCGAGGACCACATTGCCCACGACCATCCTCACAACAACTCTCATCATCTCCCTCGG
CCCCAGACACTGTCGCCCGCCGTCAGTAGCAGCAACGATGGCCTACTTCCGCCCCCCTCAGACCTGGCCAGGACT
CAGCTGAGGCCCAGTGCCACCCCTCTCTCCCATGCCTCCTTCTCCAGCCCCTCGTGGCGCGGCCCCGACAGCCAC
CACGACGGCCTTCGAGTCTCGTCTTCTGCTGGCCCAAGGACCTTGACCTGCGCCACTAATCCGCCTCTCATGGCC
GCTGCCCCCGATGCCCCCCCATCCCTCCTCTGGCACTCGGCCTCACTGCCAGGAGGCCCTGATCTCCCCCCACAT
GACATGGTCTACACTCTTGTTGATCTCTACTTCAAACACTGCAACACATGGTGTCCCATTCTCGACCGCAAGTCT
ACTTTTGGAGCCTTTTTTGGCTCCACCTCCCTGGTCGAAGTGGACCGCATCCTACTCCATGCCATTGTCGCCACC
ACGCTGCGCTTCTTGCACGACCCGCGCCTGACGCCAGACGCCCGGGCTCGTCAACATGCAATCTCCAAGCAGGTC
ATCATGACGTATGCCACGGAACACGTCAACATTGCAGCACTCAAGGCGCTTGTCATTCTCGCCCTTGACGAACTG
GGCACCTCGAATGGCCCGCGCGGATGGAACCTGCTGTCTTTGCTGGCCCAGAATGTCCGCCACCTCGGGCTCTGC
AACGAGACGCGCACATATCTATCCGCCACGCCCCAGGACCTGCCCCACACCGCTTCTACCCGCAGAGTCGCCGTT
GGGCCTCCCGAGTCGTGGATCGAGGACGAGGGCCGCCGACGCCTTTGCTGGATGGTCTATCTGCTGGACCGGTAC
GCAACCGTGGCGACAACGTTTGATTTTAGTCTCGACGACAATGCAATGCGTCGCTTGCTGCCCTGCTCATACGAC
TTGTTCTCGCGCAACGTGCCCGTTGAGACGCGATCCGTCAATTTCTGCGACCAAGACTCCCAGCACGGCCAGCAC
GTCGACCGTCCCGAGAACCTGGGCAGCTTTTCGCATCACTGCGAAATGCTTCGAATTCTCAGTCGCGTCCACAAC
TTCCTCAAGGTGCCCATTGACCACTCGACGGCCATGGGCATGACGGGATGGCGCCGCACCTATCGCTCGCTCGAT
GCAGCTCTCGACAGCTGGTTGCAAGGCCTGCCAAGCGAGTACAGCCGCATATCCGCCCTCTGCCACTCAGACCCG
GCTAGCCGAGTGGCCAATTGGTTTATGCTGCACAGCGCCTATGTCACCTCGGTTGTTCGTCTACATTCGGCTGCA
GCCTATCCCAGTGTACGGTCGCCGCTGATGCCGCCCTCTCACTACGCCATGCAACGCTGCCTCTCGGCCGTCCAA
AGCCTGCGCGACATTACCCAGGATGTCTACGAGGCCAACGGGCTTGACCTCTTGGGTCCTCCATTTGCCTTTGCG
CTTTGGGTAGCGGCGCGCCTGCTAGTGGTGCATGCGGCTGCCGTTGGCTGTCCAGTCGACGCCAAAGTCGACTTC
TTCATCGACATGCTAAGCTACGTCGGCCAGTACTGGGAAGTGGCAACCAAGTATGCGCGCATTCTTGCCCGGGTT
GTTGAACGCGGGCGCCAGGGCGACATGACGAGCTTTTGGGCAATGAGAAGAGCGGCCCATGATTTGGTCAATCTC
AGCGCCGAGTCGCGGCAATCGGTGCTTGAGGAACCGTCATGCAAAGCCGTTGAGCTCAGTGAGCTCGACGGCATC
GACGTCTTTGACTTTTTCAACTATCCCAAGATGACGAGGCTAGGCGCACCGCCGCACGTCGGGGCCATGGTGCAA
CCACAGGGCTTACCCGATCCCGAGTCTGACTGGCTTGGCTACGGCTCATCCTTTGACTGA
Gene >OphauG2|4906
ATGTCCGACGGCAATGGCCGCCAAGAAGAAATGGTGGTAGACCAAGCGACTGATGCGCGGCCGGCATGCGCAGCC
GAGGATGAGGCCAACTCGATGCCGAGCAACGACGAGGGCGGGTCGAGCGATGATGACACGGCGCACATGGGGCCC
GCCTCGGCCGGCAGCAAGAGGAAACGGACAACGCCCAAGTATCAGAAGACATCGTAAGCCCGAGCCTATCCCGAC
CCCCCTTTGCTTGTTGCCTTTGGCATGACGCATCTTGTTGTGCCACACTCTCTGCTGACTGCGCCTGTCCTCTGC
TCCCTTTGTCTCATGTAGATGCGAGCTGTGCAAGGCCCGCAAGGTCAAGTGCGATCGAGCTGAGCCGGCCTGTTC
ATGGTGCGCTCGCCACAACCGCAACTGTGTCTATCTCGAGAGGCAGAAGCCTGGCAGCCGCATCGGCTTCACCCT
CGAGCTCGAGTCCAAGGTGAACCGCGTCGACGCCCTGCTGCAGACCCTGTGGCGCCGCGTCGAGGACCACATTGC
CCACGACCATCCTCACAACAACTCTCATCATCTCCCTCGGCCCCAGACACTGTCGCCCGCCGTCAGTAGCAGCAA
CGATGGCCTACTTCCGCCCCCCTCAGACCTGGCCAGGACTCAGCTGAGGCCCAGTGCCACCCCTCTCTCCCATGC
CTCCTTCTCCAGCCCCTCGTGGCGCGGCCCCGACAGCCACCACGACGGCCTTCGAGTCTCGTCTTCTGCTGGCCC
AAGGACCTTGACCTGCGCCACTAATCCGCCTCTCATGGCCGCTGCCCCCGATGCCCCCCCATCCCTCCTCTGGCA
CTCGGCCTCACTGCCAGGAGGCCCTGATCTCCCCCCACATGACATGGTCTACACTCTTGTTGATCTCTACTTCAA
ACACTGCAACACATGGTGTCCCATTCTCGACCGCAAGTCTACTTTTGGAGCCTTTTTTGGCTCCACCTCCCTGGT
CGAAGTGGACCGCATCCTACTCCATGCCATTGTCGCCACCACGCTGCGCTTCTTGCACGACCCGCGCCTGACGCC
AGACGCCCGGGCTCGTCAACATGCAATCTCCAAGCAGGTCATCATGACGTATGCCACGGAACACGTCAACATTGC
AGCACTCAAGGCGCTTGTCATTCTCGCCCTTGACGAACTGGGCACCTCGAATGGCCCGCGCGGATGGAACCTGCT
GTCTTTGCTGGCCCAGAATGTCCGCCACCTCGGGCTCTGCAACGAGACGCGCACATATCTATCCGCCACGCCCCA
GGACCTGCCCCACACCGCTTCTACCCGCAGAGTCGCCGTTGGGCCTCCCGAGTCGTGGATCGAGGACGAGGGCCG
CCGACGCCTTTGCTGGATGGTCTATCTGCTGGACCGGTACGCAACCGTGGCGACAACGTTTGATTTTAGTCTCGA
CGACAATGCAATGCGTCGCTTGCTGCCCTGCTCATACGACTTGTTCTCGCGCAACGTGCCCGTTGAGACGCGATC
CGTCAATTTCTGCGACCAAGACTCCCAGCACGGCCAGCACGTCGACCGTCCCGAGAACCTGGGCAGCTTTTCGCA
TCACTGCGAAATGCTTCGAATTCTCAGTCGCGTCCACAACTTCCTCAAGGTGCCCATTGACCACTCGACGGCCAT
GGGCATGACGGGATGGCGCCGCACCTATCGCTCGCTCGATGCAGCTCTCGACAGCTGGTTGCAAGGCCTGCCAAG
CGAGTACAGCCGCATATCCGCCCTCTGCCACTCAGACCCGGCTAGCCGAGTGGCCAATTGGTTTATGCTGCACAG
CGCCTATGTCACCTCGGTTGTTCGTCTACATTCGGCTGCAGCCTATCCCAGTGTACGGTCGCCGCTGATGCCGCC
CTCTCACTACGCCATGCAACGCTGCCTCTCGGCCGTCCAAAGCCTGCGCGACATTACCCAGGATGTCTACGAGGC
CAACGGGCTTGACCTCTTGGGTCCTCCATTTGCCTTTGCGCTTTGGGTAGCGGCGCGCCTGCTAGTGGTGCATGC
GGCTGCCGTTGGCTGTCCAGTCGACGCCAAAGTCGACTTCTTCATCGACATGCTAAGCTACGTCGGCCAGTACTG
GGAAGTGGCAACCAAGTATGCGCGCATTCTTGCCCGGGTTGTTGAACGCGGGCGCCAGGGCGACATGACGAGCTT
TTGGGCAATGAGAAGGTGTGTATGCCCGCCGAGACGCCCCTTGCCCCTTGGCCACGGCAGCAGAAAAATGTCTGG
CTAACAGATTCTTGTTTGATTCTTGTTTGCAGAGCGGCCCATGATTTGGTCAATCTCAGCGCCGAGTCGCGGCAA
TCGGTGCTTGAGGAACCGTCATGCAAAGCCGTTGAGCTCAGTGAGCTCGACGGCATCGACGTCTTTGACTTTTTC
AACTATCCCAAGATGACGAGGCTAGGCGCACCGCCGCACGTCGGGGCCATGGTGCAACCACAGGGCTTACCCGAT
CCCGAGTCTGACTGGCTTGGCTACGGCTCATCCTTTGACTGA

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