© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | OphauG2|4904 |
| Gene name | |
| Location | Contig_426:13052..15335 |
| Strand | + |
| Gene length (bp) | 2283 |
| Transcript length (bp) | 2283 |
| Coding sequence length (bp) | 2283 |
| Protein length (aa) | 761 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF08733 | PalH | PalH/RIM21 | 2.2E-112 | 26 | 390 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q7RY98|PALH_NEUCR | pH-response regulator protein palH/prr-4 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=prr-4 PE=3 SV=1 | 18 | 697 | 0.0E+00 |
| sp|Q5V9L7|PALH_BOTFB | pH-response regulator protein palH/RIM21 OS=Botryotinia fuckeliana (strain B05.10) GN=palH PE=3 SV=2 | 55 | 673 | 1.0E-160 |
| sp|Q52E66|PALH_MAGO7 | pH-response regulator protein palH/RIM21 OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN=RIM21 PE=3 SV=1 | 17 | 497 | 7.0E-156 |
| sp|Q9P904|PALH_EMENI | pH-response regulator protein palH/RIM21 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=palH PE=3 SV=1 | 8 | 492 | 1.0E-125 |
| sp|Q9UVF6|PALH_YARLI | pH-response regulator protein palH/RIM21 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=RIM21 PE=3 SV=2 | 5 | 387 | 4.0E-45 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q7RY98|PALH_NEUCR | pH-response regulator protein palH/prr-4 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=prr-4 PE=3 SV=1 | 18 | 697 | 0.0E+00 |
| sp|Q5V9L7|PALH_BOTFB | pH-response regulator protein palH/RIM21 OS=Botryotinia fuckeliana (strain B05.10) GN=palH PE=3 SV=2 | 55 | 673 | 1.0E-160 |
| sp|Q52E66|PALH_MAGO7 | pH-response regulator protein palH/RIM21 OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN=RIM21 PE=3 SV=1 | 17 | 497 | 7.0E-156 |
| sp|Q9P904|PALH_EMENI | pH-response regulator protein palH/RIM21 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=palH PE=3 SV=1 | 8 | 492 | 1.0E-125 |
| sp|Q9UVF6|PALH_YARLI | pH-response regulator protein palH/RIM21 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=RIM21 PE=3 SV=2 | 5 | 387 | 4.0E-45 |
| sp|Q6BPR6|PALH_DEBHA | pH-response regulator protein palH/RIM21 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=RIM21 PE=3 SV=2 | 175 | 392 | 1.0E-15 |
| sp|Q52E66|PALH_MAGO7 | pH-response regulator protein palH/RIM21 OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN=RIM21 PE=3 SV=1 | 617 | 680 | 9.0E-15 |
| sp|Q6CXK7|PALH_KLULA | pH-response regulator protein palH/RIM21 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=RIM21 PE=3 SV=1 | 88 | 384 | 2.0E-12 |
| sp|Q758G4|PALH_ASHGO | pH-response regulator protein palH/RIM21 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=RIM21 PE=3 SV=1 | 83 | 415 | 2.0E-11 |
| sp|P48565|PALH_YEAST | pH-response regulator protein palH/RIM21 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RIM21 PE=1 SV=1 | 144 | 384 | 2.0E-11 |
| sp|Q59YK4|PALH_CANAL | pH-response regulator protein palH/RIM21 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=RIM21 PE=3 SV=1 | 85 | 428 | 7.0E-09 |
| sp|Q6FJT9|PALH_CANGA | pH-response regulator protein palH/RIM21 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=RIM21 PE=3 SV=1 | 173 | 384 | 1.0E-07 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 19 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 94 | 116 | 22 |
| 2 | 228 | 250 | 22 |
| 3 | 270 | 292 | 22 |
| 4 | 305 | 327 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauG2|4904 MESLTFASTTLTAAPTLCTTTVMPAKGFLTMADSPPHVTLARAVVYEVPCPTKPLNSFAIVSPESAEDSSLNPHD ESSDTRFSDFRDPFYASTFPICYALAATTVTAYMLLIMLFITPRSFLDGGVVYLGRRRGFTHSHSGGETIGGRPW LQKVAALTVAVSLTIATHDTFKVAQRQYQWGAQNAGVLQSAVMGSVELRVIRLISNTFLWLAQAQTLIRLFPRHR EKVIIKWAAFALITLDLIFSAINSFRDHDKNSLANPMAGSFEHPIPALSYLFQLLLGVLYAAWVIYYSLMKKRYA FYHPLMKNMPLLAMVSLTAILVPVVFFIMDICKPEFTGWGDYVRWVGAAAASVIVWEWVERIEALEREEKKDCIL GREVFDGDETLEVNASEFPWLRNRKGGARRYEKGDDNAASHAQRDQGILRGGGWPGVSAITGRQRGHGRDVHEHH SQRTVGDILRPPIWPVRPPTAVTPVSRTDTPSAASTVYAVRYQGTPDATGRTPEPLARSPDSYPPQQSTELLRQD SLTPGRRPSEDVLQAGQTAATQRSNNGHIAYSLPPINTDVEGNHGSMRPNHWRTMTLGSSAKLDVEADEPISAGA RSQADQGKFERQRGRYEAGKWDIRSRLEFFAANQAERLREKLRPTTDTAAMPVTVLPAPPRRGAALQKVLEEEEV EGAGGSAQERGSGDLESQNWHAKDERVSPSLVNPPLWPGVRRRVLAFEDEADDETTDAGSVAETASMESERREME DDGGGPSRPS* |
| Coding | >OphauG2|4904 ATGGAGTCTCTTACATTTGCCTCGACCACTTTAACCGCGGCGCCCACGCTATGTACCACCACCGTCATGCCCGCA AAGGGCTTCCTGACCATGGCCGACTCGCCTCCTCATGTCACGCTCGCCCGCGCAGTCGTCTACGAGGTGCCTTGT CCCACCAAGCCGCTCAACTCGTTTGCCATTGTGTCGCCAGAAAGCGCCGAAGACTCGAGCCTCAATCCCCACGAC GAATCGTCCGACACACGCTTTTCCGACTTTCGTGACCCCTTCTACGCCTCAACCTTTCCCATTTGCTACGCCCTC GCTGCAACAACGGTGACTGCCTACATGCTCTTGATAATGCTCTTCATCACCCCCCGTTCTTTTCTCGATGGTGGC GTCGTCTATCTTGGCCGTCGCCGCGGCTTCACACATAGCCACTCGGGTGGCGAGACAATTGGCGGTCGGCCTTGG CTACAAAAAGTCGCGGCACTTACCGTTGCCGTCTCCCTCACCATTGCCACCCACGACACCTTCAAAGTGGCCCAG CGACAGTACCAATGGGGCGCCCAAAATGCCGGAGTCTTGCAAAGCGCTGTTATGGGCAGCGTCGAACTACGCGTC ATCCGCCTCATATCAAACACTTTTCTCTGGCTGGCTCAGGCTCAGACACTGATACGACTTTTTCCTCGCCATCGT GAAAAGGTGATAATCAAGTGGGCCGCTTTTGCCCTCATCACCCTTGACCTCATCTTCAGTGCCATCAACAGCTTC CGCGACCACGACAAGAATTCACTGGCCAACCCCATGGCAGGTAGTTTTGAGCATCCAATCCCTGCCCTGAGTTAT CTCTTTCAGCTACTATTGGGCGTCTTGTATGCCGCTTGGGTCATATACTACTCACTCATGAAGAAGCGCTACGCC TTTTATCACCCACTCATGAAGAACATGCCGCTGCTGGCCATGGTGTCTCTTACCGCCATCCTCGTGCCTGTCGTC TTCTTCATCATGGACATATGCAAACCAGAATTTACTGGCTGGGGCGACTACGTGCGCTGGGTTGGTGCTGCTGCG GCCAGTGTCATTGTGTGGGAGTGGGTAGAGCGCATAGAAGCGCTTGAGCGCGAAGAGAAGAAGGATTGCATTCTT GGACGAGAAGTCTTTGACGGAGACGAAACGCTCGAAGTCAATGCGTCCGAGTTTCCTTGGCTTCGCAACCGAAAA GGCGGGGCTAGGCGCTATGAAAAGGGCGACGACAATGCCGCCAGCCACGCCCAGCGAGATCAAGGCATACTTCGT GGCGGTGGATGGCCAGGAGTGTCGGCCATTACGGGAAGACAGCGCGGGCATGGGCGCGATGTCCATGAACACCAC TCTCAGCGCACCGTGGGGGATATCCTTCGGCCTCCTATCTGGCCTGTTCGGCCTCCGACAGCCGTGACGCCTGTC AGCAGAACAGACACGCCCAGCGCTGCGAGCACGGTGTACGCGGTGCGCTATCAAGGGACTCCTGACGCGACTGGC AGGACTCCAGAGCCCCTGGCGAGAAGCCCCGATTCATACCCGCCTCAGCAAAGCACAGAGCTGTTGCGGCAAGAT AGTCTGACTCCGGGCCGGCGCCCAAGTGAAGACGTTTTGCAAGCTGGCCAGACGGCTGCTACTCAGCGGAGCAAC AATGGACACATTGCCTATTCGTTACCGCCCATAAACACAGATGTCGAGGGTAATCATGGATCCATGCGGCCAAAT CACTGGCGAACCATGACGCTGGGATCAAGCGCCAAGCTGGACGTGGAGGCGGATGAGCCGATATCGGCTGGGGCG CGCAGCCAAGCCGATCAAGGCAAATTTGAGCGACAACGAGGCCGATATGAGGCTGGGAAATGGGACATTCGATCA AGACTAGAGTTTTTTGCGGCCAATCAAGCAGAAAGGCTTCGCGAAAAGCTGCGGCCGACGACGGACACGGCTGCC ATGCCAGTAACGGTGCTTCCTGCGCCGCCACGACGTGGAGCTGCGCTGCAAAAGGTTCTCGAAGAAGAAGAAGTA GAAGGGGCTGGTGGTTCGGCACAAGAGCGGGGCAGTGGTGATTTGGAGAGCCAGAATTGGCATGCAAAAGACGAG AGAGTGTCACCATCGCTGGTGAATCCACCGTTGTGGCCAGGGGTTAGACGGCGGGTGCTGGCGTTTGAAGATGAG GCTGACGACGAGACGACGGATGCGGGATCTGTTGCTGAGACAGCTTCGATGGAGTCGGAGCGGCGAGAAATGGAG GATGACGGCGGCGGGCCGTCGCGGCCAAGTTGA |
| Transcript | >OphauG2|4904 ATGGAGTCTCTTACATTTGCCTCGACCACTTTAACCGCGGCGCCCACGCTATGTACCACCACCGTCATGCCCGCA AAGGGCTTCCTGACCATGGCCGACTCGCCTCCTCATGTCACGCTCGCCCGCGCAGTCGTCTACGAGGTGCCTTGT CCCACCAAGCCGCTCAACTCGTTTGCCATTGTGTCGCCAGAAAGCGCCGAAGACTCGAGCCTCAATCCCCACGAC GAATCGTCCGACACACGCTTTTCCGACTTTCGTGACCCCTTCTACGCCTCAACCTTTCCCATTTGCTACGCCCTC GCTGCAACAACGGTGACTGCCTACATGCTCTTGATAATGCTCTTCATCACCCCCCGTTCTTTTCTCGATGGTGGC GTCGTCTATCTTGGCCGTCGCCGCGGCTTCACACATAGCCACTCGGGTGGCGAGACAATTGGCGGTCGGCCTTGG CTACAAAAAGTCGCGGCACTTACCGTTGCCGTCTCCCTCACCATTGCCACCCACGACACCTTCAAAGTGGCCCAG CGACAGTACCAATGGGGCGCCCAAAATGCCGGAGTCTTGCAAAGCGCTGTTATGGGCAGCGTCGAACTACGCGTC ATCCGCCTCATATCAAACACTTTTCTCTGGCTGGCTCAGGCTCAGACACTGATACGACTTTTTCCTCGCCATCGT GAAAAGGTGATAATCAAGTGGGCCGCTTTTGCCCTCATCACCCTTGACCTCATCTTCAGTGCCATCAACAGCTTC CGCGACCACGACAAGAATTCACTGGCCAACCCCATGGCAGGTAGTTTTGAGCATCCAATCCCTGCCCTGAGTTAT CTCTTTCAGCTACTATTGGGCGTCTTGTATGCCGCTTGGGTCATATACTACTCACTCATGAAGAAGCGCTACGCC TTTTATCACCCACTCATGAAGAACATGCCGCTGCTGGCCATGGTGTCTCTTACCGCCATCCTCGTGCCTGTCGTC TTCTTCATCATGGACATATGCAAACCAGAATTTACTGGCTGGGGCGACTACGTGCGCTGGGTTGGTGCTGCTGCG GCCAGTGTCATTGTGTGGGAGTGGGTAGAGCGCATAGAAGCGCTTGAGCGCGAAGAGAAGAAGGATTGCATTCTT GGACGAGAAGTCTTTGACGGAGACGAAACGCTCGAAGTCAATGCGTCCGAGTTTCCTTGGCTTCGCAACCGAAAA GGCGGGGCTAGGCGCTATGAAAAGGGCGACGACAATGCCGCCAGCCACGCCCAGCGAGATCAAGGCATACTTCGT GGCGGTGGATGGCCAGGAGTGTCGGCCATTACGGGAAGACAGCGCGGGCATGGGCGCGATGTCCATGAACACCAC TCTCAGCGCACCGTGGGGGATATCCTTCGGCCTCCTATCTGGCCTGTTCGGCCTCCGACAGCCGTGACGCCTGTC AGCAGAACAGACACGCCCAGCGCTGCGAGCACGGTGTACGCGGTGCGCTATCAAGGGACTCCTGACGCGACTGGC AGGACTCCAGAGCCCCTGGCGAGAAGCCCCGATTCATACCCGCCTCAGCAAAGCACAGAGCTGTTGCGGCAAGAT AGTCTGACTCCGGGCCGGCGCCCAAGTGAAGACGTTTTGCAAGCTGGCCAGACGGCTGCTACTCAGCGGAGCAAC AATGGACACATTGCCTATTCGTTACCGCCCATAAACACAGATGTCGAGGGTAATCATGGATCCATGCGGCCAAAT CACTGGCGAACCATGACGCTGGGATCAAGCGCCAAGCTGGACGTGGAGGCGGATGAGCCGATATCGGCTGGGGCG CGCAGCCAAGCCGATCAAGGCAAATTTGAGCGACAACGAGGCCGATATGAGGCTGGGAAATGGGACATTCGATCA AGACTAGAGTTTTTTGCGGCCAATCAAGCAGAAAGGCTTCGCGAAAAGCTGCGGCCGACGACGGACACGGCTGCC ATGCCAGTAACGGTGCTTCCTGCGCCGCCACGACGTGGAGCTGCGCTGCAAAAGGTTCTCGAAGAAGAAGAAGTA GAAGGGGCTGGTGGTTCGGCACAAGAGCGGGGCAGTGGTGATTTGGAGAGCCAGAATTGGCATGCAAAAGACGAG AGAGTGTCACCATCGCTGGTGAATCCACCGTTGTGGCCAGGGGTTAGACGGCGGGTGCTGGCGTTTGAAGATGAG GCTGACGACGAGACGACGGATGCGGGATCTGTTGCTGAGACAGCTTCGATGGAGTCGGAGCGGCGAGAAATGGAG GATGACGGCGGCGGGCCGTCGCGGCCAAGTTGA |
| Gene | >OphauG2|4904 ATGGAGTCTCTTACATTTGCCTCGACCACTTTAACCGCGGCGCCCACGCTATGTACCACCACCGTCATGCCCGCA AAGGGCTTCCTGACCATGGCCGACTCGCCTCCTCATGTCACGCTCGCCCGCGCAGTCGTCTACGAGGTGCCTTGT CCCACCAAGCCGCTCAACTCGTTTGCCATTGTGTCGCCAGAAAGCGCCGAAGACTCGAGCCTCAATCCCCACGAC GAATCGTCCGACACACGCTTTTCCGACTTTCGTGACCCCTTCTACGCCTCAACCTTTCCCATTTGCTACGCCCTC GCTGCAACAACGGTGACTGCCTACATGCTCTTGATAATGCTCTTCATCACCCCCCGTTCTTTTCTCGATGGTGGC GTCGTCTATCTTGGCCGTCGCCGCGGCTTCACACATAGCCACTCGGGTGGCGAGACAATTGGCGGTCGGCCTTGG CTACAAAAAGTCGCGGCACTTACCGTTGCCGTCTCCCTCACCATTGCCACCCACGACACCTTCAAAGTGGCCCAG CGACAGTACCAATGGGGCGCCCAAAATGCCGGAGTCTTGCAAAGCGCTGTTATGGGCAGCGTCGAACTACGCGTC ATCCGCCTCATATCAAACACTTTTCTCTGGCTGGCTCAGGCTCAGACACTGATACGACTTTTTCCTCGCCATCGT GAAAAGGTGATAATCAAGTGGGCCGCTTTTGCCCTCATCACCCTTGACCTCATCTTCAGTGCCATCAACAGCTTC CGCGACCACGACAAGAATTCACTGGCCAACCCCATGGCAGGTAGTTTTGAGCATCCAATCCCTGCCCTGAGTTAT CTCTTTCAGCTACTATTGGGCGTCTTGTATGCCGCTTGGGTCATATACTACTCACTCATGAAGAAGCGCTACGCC TTTTATCACCCACTCATGAAGAACATGCCGCTGCTGGCCATGGTGTCTCTTACCGCCATCCTCGTGCCTGTCGTC TTCTTCATCATGGACATATGCAAACCAGAATTTACTGGCTGGGGCGACTACGTGCGCTGGGTTGGTGCTGCTGCG GCCAGTGTCATTGTGTGGGAGTGGGTAGAGCGCATAGAAGCGCTTGAGCGCGAAGAGAAGAAGGATTGCATTCTT GGACGAGAAGTCTTTGACGGAGACGAAACGCTCGAAGTCAATGCGTCCGAGTTTCCTTGGCTTCGCAACCGAAAA GGCGGGGCTAGGCGCTATGAAAAGGGCGACGACAATGCCGCCAGCCACGCCCAGCGAGATCAAGGCATACTTCGT GGCGGTGGATGGCCAGGAGTGTCGGCCATTACGGGAAGACAGCGCGGGCATGGGCGCGATGTCCATGAACACCAC TCTCAGCGCACCGTGGGGGATATCCTTCGGCCTCCTATCTGGCCTGTTCGGCCTCCGACAGCCGTGACGCCTGTC AGCAGAACAGACACGCCCAGCGCTGCGAGCACGGTGTACGCGGTGCGCTATCAAGGGACTCCTGACGCGACTGGC AGGACTCCAGAGCCCCTGGCGAGAAGCCCCGATTCATACCCGCCTCAGCAAAGCACAGAGCTGTTGCGGCAAGAT AGTCTGACTCCGGGCCGGCGCCCAAGTGAAGACGTTTTGCAAGCTGGCCAGACGGCTGCTACTCAGCGGAGCAAC AATGGACACATTGCCTATTCGTTACCGCCCATAAACACAGATGTCGAGGGTAATCATGGATCCATGCGGCCAAAT CACTGGCGAACCATGACGCTGGGATCAAGCGCCAAGCTGGACGTGGAGGCGGATGAGCCGATATCGGCTGGGGCG CGCAGCCAAGCCGATCAAGGCAAATTTGAGCGACAACGAGGCCGATATGAGGCTGGGAAATGGGACATTCGATCA AGACTAGAGTTTTTTGCGGCCAATCAAGCAGAAAGGCTTCGCGAAAAGCTGCGGCCGACGACGGACACGGCTGCC ATGCCAGTAACGGTGCTTCCTGCGCCGCCACGACGTGGAGCTGCGCTGCAAAAGGTTCTCGAAGAAGAAGAAGTA GAAGGGGCTGGTGGTTCGGCACAAGAGCGGGGCAGTGGTGATTTGGAGAGCCAGAATTGGCATGCAAAAGACGAG AGAGTGTCACCATCGCTGGTGAATCCACCGTTGTGGCCAGGGGTTAGACGGCGGGTGCTGGCGTTTGAAGATGAG GCTGACGACGAGACGACGGATGCGGGATCTGTTGCTGAGACAGCTTCGATGGAGTCGGAGCGGCGAGAAATGGAG GATGACGGCGGCGGGCCGTCGCGGCCAAGTTGA |