Fungal Genomics

at Utrecht University

General Properties

Protein ID	OphauG2\|4875
Gene name
Location	Contig_422:4869..6317
Strand	-
Gene length (bp)	1448
Transcript length (bp)	1374
Coding sequence length (bp)	1374
Protein length (aa)	458

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF03388	Lectin_leg-like	Legume-like lectin family	3.2E-22	46	252

Swissprot hits

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|P43555\|EMP47_YEAST	Protein EMP47 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=EMP47 PE=1 SV=1	4	304	1.0E-18
sp\|Q2HJD1\|LMA2L_BOVIN	VIP36-like protein OS=Bos taurus GN=LMAN2L PE=2 SV=1	59	251	1.0E-10
sp\|Q9H0V9\|LMA2L_HUMAN	VIP36-like protein OS=Homo sapiens GN=LMAN2L PE=1 SV=1	59	251	4.0E-10
sp\|Q5RCF0\|LMA2L_PONAB	VIP36-like protein OS=Pongo abelii GN=LMAN2L PE=3 SV=1	59	251	5.0E-10
sp\|P59481\|LMA2L_MOUSE	VIP36-like protein OS=Mus musculus GN=Lman2l PE=1 SV=1	59	265	7.0E-10

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|P43555\|EMP47_YEAST	Protein EMP47 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=EMP47 PE=1 SV=1	4	304	1.0E-18
sp\|Q2HJD1\|LMA2L_BOVIN	VIP36-like protein OS=Bos taurus GN=LMAN2L PE=2 SV=1	59	251	1.0E-10
sp\|Q9H0V9\|LMA2L_HUMAN	VIP36-like protein OS=Homo sapiens GN=LMAN2L PE=1 SV=1	59	251	4.0E-10
sp\|Q5RCF0\|LMA2L_PONAB	VIP36-like protein OS=Pongo abelii GN=LMAN2L PE=3 SV=1	59	251	5.0E-10
sp\|P59481\|LMA2L_MOUSE	VIP36-like protein OS=Mus musculus GN=Lman2l PE=1 SV=1	59	265	7.0E-10
sp\|Q9TU32\|LMAN1_CHLAE	Protein ERGIC-53 OS=Chlorocebus aethiops GN=LMAN1 PE=2 SV=1	39	457	4.0E-08
sp\|Q5FB95\|LMA1L_RAT	Protein ERGIC-53-like OS=Rattus norvegicus GN=Lman1l PE=1 SV=1	73	336	1.0E-06
sp\|Q8VCD3\|LMA1L_MOUSE	Protein ERGIC-53-like OS=Mus musculus GN=Lman1l PE=2 SV=2	73	237	5.0E-06
sp\|P49257\|LMAN1_HUMAN	Protein ERGIC-53 OS=Homo sapiens GN=LMAN1 PE=1 SV=2	39	457	6.0E-06

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GO

GO Term	Description	Terminal node
GO:0016020	membrane	Yes
GO:0005575	cellular_component	No
GO:0110165	cellular anatomical entity	No

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
Yes	1 - 22	0.45

Transmembrane Domains

Domain #	Start	End	Length
1	423	445	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>OphauG2\|4875 MRPWSVLAALAALLVAHGCHATPIINEISFGHAGRLSPVESPGKIPHFSIFGHGQLPEVLSNKIVLTPIAPGNQH SAVWADSPLDRRVWTADVEFRANGPERTGHEGGGSLALWLVRDGVHGVATNSIYTVGRFEGLALVIDAHGPSGGM IRGFLNDGSQHYAALSQQQAQPQPGEGVDKLAFGHCPYAYRNLGRPSHLRVLQTHKSFRVDIDGQLCFETDKVSL PAGYHFGMTAATPDSPDSFEVFELSVTSDSTVSSSSDGKMEFSTLHDAGKQHQDQQGQTRQTQASMADESADKFT TSQMQFADLHNRLQWATHQMQAIYDTVKQLEQSGAQRSSEVRQGEEQRFADLRRTFDSLSSRILGVIEGEADRLE RVKRLEAEVRGMRSDINNKLSSHHDSLQSYLGHHHASLAEAVASSMPNHGLLIAVVAGSQLILVVAYIVYKRRRA NSAKKFL*
Coding	>OphauG2\|4875 ATGCGGCCGTGGAGCGTGCTCGCGGCATTGGCGGCGCTGCTCGTCGCTCATGGCTGTCATGCAACTCCCATAATC AACGAGATTAGCTTCGGCCATGCCGGACGCCTCAGTCCCGTGGAATCGCCTGGCAAGATTCCGCACTTCTCCATC TTTGGCCATGGGCAGCTCCCAGAGGTGCTCTCCAACAAGATTGTATTGACGCCCATTGCTCCCGGCAACCAGCAC TCGGCCGTGTGGGCGGATTCGCCCCTGGACAGAAGAGTGTGGACGGCGGATGTCGAGTTCCGCGCCAATGGACCG GAGCGCACTGGTCATGAAGGCGGCGGCAGCCTCGCGCTTTGGCTGGTACGGGATGGCGTGCATGGCGTGGCCACG AATTCCATCTACACAGTGGGCCGCTTCGAGGGCCTCGCTCTCGTCATTGATGCCCATGGGCCCTCGGGAGGCATG ATTCGCGGCTTCCTCAACGACGGGTCGCAGCACTATGCTGCTCTCTCGCAGCAACAGGCGCAGCCGCAGCCTGGC GAGGGCGTGGACAAGCTTGCCTTTGGCCACTGCCCCTATGCCTATCGCAACCTCGGACGGCCGTCGCATCTCAGG GTGCTTCAGACTCACAAGTCGTTTCGCGTGGATATTGATGGTCAGCTCTGCTTCGAGACGGACAAGGTTAGCCTG CCAGCCGGCTACCACTTTGGCATGACGGCCGCGACACCGGACAGCCCCGACTCGTTTGAAGTGTTTGAGCTATCC GTCACCTCGGACTCGACAGTGTCTAGCAGCAGCGACGGCAAGATGGAATTCTCGACGCTGCACGACGCGGGCAAG CAGCACCAAGACCAACAAGGGCAGACACGGCAAACACAAGCGAGCATGGCTGACGAATCTGCCGACAAGTTTACC ACGTCTCAGATGCAGTTTGCCGATTTACACAACCGCCTACAGTGGGCAACTCATCAGATGCAAGCCATTTACGAC ACGGTCAAGCAGCTGGAGCAGTCTGGTGCACAGCGCAGCAGCGAGGTGCGCCAAGGCGAGGAGCAGCGCTTTGCG GATTTGCGAAGGACGTTTGACTCGCTCAGTAGTCGCATCCTTGGCGTTATTGAAGGCGAAGCGGACCGGCTGGAA CGGGTCAAGAGACTCGAGGCCGAGGTGCGCGGGATGCGCAGCGATATAAACAACAAGCTCTCGTCACACCACGAC TCGCTGCAGAGCTATCTGGGACACCATCACGCGTCTCTTGCAGAGGCAGTGGCGAGCAGCATGCCCAACCATGGG CTGCTGATTGCCGTTGTGGCTGGATCGCAGCTTATTCTCGTGGTGGCATACATTGTATACAAGCGGCGGCGGGCG AATAGTGCCAAGAAGTTTTTGTAG
Transcript	>OphauG2\|4875 ATGCGGCCGTGGAGCGTGCTCGCGGCATTGGCGGCGCTGCTCGTCGCTCATGGCTGTCATGCAACTCCCATAATC AACGAGATTAGCTTCGGCCATGCCGGACGCCTCAGTCCCGTGGAATCGCCTGGCAAGATTCCGCACTTCTCCATC TTTGGCCATGGGCAGCTCCCAGAGGTGCTCTCCAACAAGATTGTATTGACGCCCATTGCTCCCGGCAACCAGCAC TCGGCCGTGTGGGCGGATTCGCCCCTGGACAGAAGAGTGTGGACGGCGGATGTCGAGTTCCGCGCCAATGGACCG GAGCGCACTGGTCATGAAGGCGGCGGCAGCCTCGCGCTTTGGCTGGTACGGGATGGCGTGCATGGCGTGGCCACG AATTCCATCTACACAGTGGGCCGCTTCGAGGGCCTCGCTCTCGTCATTGATGCCCATGGGCCCTCGGGAGGCATG ATTCGCGGCTTCCTCAACGACGGGTCGCAGCACTATGCTGCTCTCTCGCAGCAACAGGCGCAGCCGCAGCCTGGC GAGGGCGTGGACAAGCTTGCCTTTGGCCACTGCCCCTATGCCTATCGCAACCTCGGACGGCCGTCGCATCTCAGG GTGCTTCAGACTCACAAGTCGTTTCGCGTGGATATTGATGGTCAGCTCTGCTTCGAGACGGACAAGGTTAGCCTG CCAGCCGGCTACCACTTTGGCATGACGGCCGCGACACCGGACAGCCCCGACTCGTTTGAAGTGTTTGAGCTATCC GTCACCTCGGACTCGACAGTGTCTAGCAGCAGCGACGGCAAGATGGAATTCTCGACGCTGCACGACGCGGGCAAG CAGCACCAAGACCAACAAGGGCAGACACGGCAAACACAAGCGAGCATGGCTGACGAATCTGCCGACAAGTTTACC ACGTCTCAGATGCAGTTTGCCGATTTACACAACCGCCTACAGTGGGCAACTCATCAGATGCAAGCCATTTACGAC ACGGTCAAGCAGCTGGAGCAGTCTGGTGCACAGCGCAGCAGCGAGGTGCGCCAAGGCGAGGAGCAGCGCTTTGCG GATTTGCGAAGGACGTTTGACTCGCTCAGTAGTCGCATCCTTGGCGTTATTGAAGGCGAAGCGGACCGGCTGGAA CGGGTCAAGAGACTCGAGGCCGAGGTGCGCGGGATGCGCAGCGATATAAACAACAAGCTCTCGTCACACCACGAC TCGCTGCAGAGCTATCTGGGACACCATCACGCGTCTCTTGCAGAGGCAGTGGCGAGCAGCATGCCCAACCATGGG CTGCTGATTGCCGTTGTGGCTGGATCGCAGCTTATTCTCGTGGTGGCATACATTGTATACAAGCGGCGGCGGGCG AATAGTGCCAAGAAGTTTTTGTAG
Gene	>OphauG2\|4875 ATGCGGCCGTGGAGCGTGCTCGCGGCATTGGCGGCGCTGCTCGTCGCTCATGGCTGTCATGCAACTCCCATAATC AACGAGATTAGCTTCGGCCATGCCGGACGGTACAGCCTTTGCCCACCACCAAGTTTGCTTCGTCGGCACAGACAG CTAACGCCGTTTTGATGTGCTTGTGCAGCCTCAGTCCCGTGGAATCGCCTGGCAAGATTCCGCACTTCTCCATCT TTGGCCATGGGCAGCTCCCAGAGGTGCTCTCCAACAAGATTGTATTGACGCCCATTGCTCCCGGCAACCAGCACT CGGCCGTGTGGGCGGATTCGCCCCTGGACAGAAGAGTGTGGACGGCGGATGTCGAGTTCCGCGCCAATGGACCGG AGCGCACTGGTCATGAAGGCGGCGGCAGCCTCGCGCTTTGGCTGGTACGGGATGGCGTGCATGGCGTGGCCACGA ATTCCATCTACACAGTGGGCCGCTTCGAGGGCCTCGCTCTCGTCATTGATGCCCATGGGCCCTCGGGAGGCATGA TTCGCGGCTTCCTCAACGACGGGTCGCAGCACTATGCTGCTCTCTCGCAGCAACAGGCGCAGCCGCAGCCTGGCG AGGGCGTGGACAAGCTTGCCTTTGGCCACTGCCCCTATGCCTATCGCAACCTCGGACGGCCGTCGCATCTCAGGG TGCTTCAGACTCACAAGTCGTTTCGCGTGGATATTGATGGTCAGCTCTGCTTCGAGACGGACAAGGTTAGCCTGC CAGCCGGCTACCACTTTGGCATGACGGCCGCGACACCGGACAGCCCCGACTCGTTTGAAGTGTTTGAGCTATCCG TCACCTCGGACTCGACAGTGTCTAGCAGCAGCGACGGCAAGATGGAATTCTCGACGCTGCACGACGCGGGCAAGC AGCACCAAGACCAACAAGGGCAGACACGGCAAACACAAGCGAGCATGGCTGACGAATCTGCCGACAAGTTTACCA CGTCTCAGATGCAGTTTGCCGATTTACACAACCGCCTACAGTGGGCAACTCATCAGATGCAAGCCATTTACGACA CGGTCAAGCAGCTGGAGCAGTCTGGTGCACAGCGCAGCAGCGAGGTGCGCCAAGGCGAGGAGCAGCGCTTTGCGG ATTTGCGAAGGACGTTTGACTCGCTCAGTAGTCGCATCCTTGGCGTTATTGAAGGCGAAGCGGACCGGCTGGAAC GGGTCAAGAGACTCGAGGCCGAGGTGCGCGGGATGCGCAGCGATATAAACAACAAGCTCTCGTCACACCACGACT CGCTGCAGAGCTATCTGGGACACCATCACGCGTCTCTTGCAGAGGCAGTGGCGAGCAGCATGCCCAACCATGGGC TGCTGATTGCCGTTGTGGCTGGATCGCAGCTTATTCTCGTGGTGGCATACATTGTATACAAGCGGCGGCGGGCGA ATAGTGCCAAGAAGTTTTTGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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