Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauG2|4867
Gene name
LocationContig_421:2453..3941
Strand-
Gene length (bp)1488
Transcript length (bp)1314
Coding sequence length (bp)1314
Protein length (aa) 438

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00928 Adap_comp_sub Adaptor complexes medium subunit family 1.4E-84 158 436
PF01217 Clat_adaptor_s Clathrin adaptor complex small chain 2.1E-05 1 128

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|P54672|AP2M_DICDI AP-2 complex subunit mu OS=Dictyostelium discoideum GN=apm2 PE=2 SV=2 1 436 4.0E-171
sp|P84092|AP2M1_RAT AP-2 complex subunit mu OS=Rattus norvegicus GN=Ap2m1 PE=1 SV=1 1 436 6.0E-170
sp|Q5ZMP6|AP2M1_CHICK AP-2 complex subunit mu OS=Gallus gallus GN=AP2M1 PE=2 SV=1 1 436 6.0E-170
sp|Q3ZC13|AP2M1_BOVIN AP-2 complex subunit mu OS=Bos taurus GN=AP2M1 PE=2 SV=1 1 436 6.0E-170
sp|Q4R706|AP2M1_MACFA AP-2 complex subunit mu OS=Macaca fascicularis GN=AP2M1 PE=2 SV=1 1 436 6.0E-170
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Swissprot ID Swissprot Description Start End E-value
sp|P54672|AP2M_DICDI AP-2 complex subunit mu OS=Dictyostelium discoideum GN=apm2 PE=2 SV=2 1 436 4.0E-171
sp|P84092|AP2M1_RAT AP-2 complex subunit mu OS=Rattus norvegicus GN=Ap2m1 PE=1 SV=1 1 436 6.0E-170
sp|Q5ZMP6|AP2M1_CHICK AP-2 complex subunit mu OS=Gallus gallus GN=AP2M1 PE=2 SV=1 1 436 6.0E-170
sp|Q3ZC13|AP2M1_BOVIN AP-2 complex subunit mu OS=Bos taurus GN=AP2M1 PE=2 SV=1 1 436 6.0E-170
sp|Q4R706|AP2M1_MACFA AP-2 complex subunit mu OS=Macaca fascicularis GN=AP2M1 PE=2 SV=1 1 436 6.0E-170
sp|P84091|AP2M1_MOUSE AP-2 complex subunit mu OS=Mus musculus GN=Ap2m1 PE=1 SV=1 1 436 6.0E-170
sp|Q96CW1|AP2M1_HUMAN AP-2 complex subunit mu OS=Homo sapiens GN=AP2M1 PE=1 SV=2 1 436 6.0E-170
sp|Q6P856|AP2M1_XENTR AP-2 complex subunit mu OS=Xenopus tropicalis GN=ap2m1 PE=2 SV=1 1 436 2.0E-169
sp|Q6NWK2|AP2MA_DANRE AP-2 complex subunit mu-A OS=Danio rerio GN=ap2m1a PE=2 SV=1 1 436 6.0E-169
sp|Q801Q8|AP2M1_XENLA AP-2 complex subunit mu OS=Xenopus laevis GN=ap2m1 PE=2 SV=1 1 436 7.0E-169
sp|Q5NVF7|AP2M1_PONAB AP-2 complex subunit mu OS=Pongo abelii GN=AP2M1 PE=2 SV=1 1 436 1.0E-168
sp|Q7ZW98|AP2MB_DANRE AP-2 complex subunit mu-B OS=Danio rerio GN=ap2m1b PE=2 SV=1 1 436 2.0E-168
sp|P35603|AP2M_CAEEL AP-2 complex subunit mu OS=Caenorhabditis elegans GN=dpy-23 PE=2 SV=2 1 436 2.0E-159
sp|O23140|AP2M_ARATH AP-2 complex subunit mu OS=Arabidopsis thaliana GN=AP2M PE=1 SV=1 3 436 2.0E-147
sp|Q09718|AP2M_SCHPO AP-2 complex subunit mu OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=apm4 PE=1 SV=1 1 437 2.0E-145
sp|Q2KJ81|AP1M1_BOVIN AP-1 complex subunit mu-1 OS=Bos taurus GN=AP1M1 PE=1 SV=3 3 436 9.0E-124
sp|Q9BXS5|AP1M1_HUMAN AP-1 complex subunit mu-1 OS=Homo sapiens GN=AP1M1 PE=1 SV=3 3 436 9.0E-124
sp|Q32Q06|AP1M1_RAT AP-1 complex subunit mu-1 OS=Rattus norvegicus GN=Ap1m1 PE=1 SV=3 3 436 2.0E-123
sp|P35585|AP1M1_MOUSE AP-1 complex subunit mu-1 OS=Mus musculus GN=Ap1m1 PE=1 SV=3 3 436 4.0E-123
sp|Q54HS9|AP1M_DICDI AP-1 complex subunit mu OS=Dictyostelium discoideum GN=apm1 PE=1 SV=1 3 436 9.0E-120
sp|P35602|AP1M_CAEEL AP-1 complex subunit mu-1-I OS=Caenorhabditis elegans GN=unc-101 PE=2 SV=2 3 436 3.0E-119
sp|O22715|AP1M2_ARATH AP-1 complex subunit mu-2 OS=Arabidopsis thaliana GN=AP1M2 PE=1 SV=1 3 437 5.0E-119
sp|Q3SYW1|AP1M2_BOVIN AP-1 complex subunit mu-2 OS=Bos taurus GN=AP1M2 PE=1 SV=3 3 436 2.0E-117
sp|Q9WVP1|AP1M2_MOUSE AP-1 complex subunit mu-2 OS=Mus musculus GN=Ap1m2 PE=1 SV=3 3 436 4.0E-117
sp|Q9Y6Q5|AP1M2_HUMAN AP-1 complex subunit mu-2 OS=Homo sapiens GN=AP1M2 PE=1 SV=4 3 436 2.0E-116
sp|Q9SAC9|AP1M1_ARATH AP-1 complex subunit mu-1 OS=Arabidopsis thaliana GN=AP1M1 PE=3 SV=1 3 437 1.0E-113
sp|Q99186|AP2M_YEAST AP-2 complex subunit mu OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=APM4 PE=1 SV=1 1 437 5.0E-113
sp|Q9HFE5|AP1M1_SCHPO AP-1 complex subunit mu-1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=apm1 PE=1 SV=1 1 436 2.0E-101
sp|Q00776|AP1M1_YEAST AP-1 complex subunit mu-1-I OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=APM1 PE=1 SV=2 1 437 2.0E-96
sp|Q9SB50|AP4M_ARATH AP-4 complex subunit mu OS=Arabidopsis thaliana GN=AP4M PE=2 SV=1 1 436 3.0E-85
sp|Q2PWT8|AP4M1_RAT AP-4 complex subunit mu-1 OS=Rattus norvegicus GN=Ap4m1 PE=1 SV=1 1 436 2.0E-60
sp|Q29RY8|AP4M1_BOVIN AP-4 complex subunit mu-1 OS=Bos taurus GN=AP4M1 PE=2 SV=1 1 436 9.0E-60
sp|Q9JKC7|AP4M1_MOUSE AP-4 complex subunit mu-1 OS=Mus musculus GN=Ap4m1 PE=2 SV=1 1 436 5.0E-59
sp|O00189|AP4M1_HUMAN AP-4 complex subunit mu-1 OS=Homo sapiens GN=AP4M1 PE=1 SV=2 1 436 1.0E-57
sp|Q24K11|AP3M1_BOVIN AP-3 complex subunit mu-1 OS=Bos taurus GN=AP3M1 PE=2 SV=1 1 436 2.0E-48
sp|Q5R478|AP3M1_PONAB AP-3 complex subunit mu-1 OS=Pongo abelii GN=AP3M1 PE=2 SV=1 1 436 3.0E-48
sp|Q9Y2T2|AP3M1_HUMAN AP-3 complex subunit mu-1 OS=Homo sapiens GN=AP3M1 PE=1 SV=1 1 436 3.0E-48
sp|Q9JKC8|AP3M1_MOUSE AP-3 complex subunit mu-1 OS=Mus musculus GN=Ap3m1 PE=1 SV=1 1 436 4.0E-48
sp|Q5ZMP7|AP3M1_CHICK AP-3 complex subunit mu-1 OS=Gallus gallus GN=AP3M1 PE=2 SV=1 1 436 1.0E-47
sp|P53676|AP3M1_RAT AP-3 complex subunit mu-1 OS=Rattus norvegicus GN=Ap3m1 PE=1 SV=1 1 436 5.0E-47
sp|Q9GPF1|AP3M_DICDI AP-3 complex subunit mu OS=Dictyostelium discoideum GN=apm3 PE=2 SV=1 1 436 1.0E-44
sp|P47795|AP1M_DIPOM AP-1 complex subunit mu OS=Diplobatis ommata PE=2 SV=1 44 436 3.0E-41
sp|F4I562|AP3M_ARATH AP-3 complex subunit mu OS=Arabidopsis thaliana GN=AP3M PE=1 SV=1 45 437 8.0E-41
sp|P53677|AP3M2_HUMAN AP-3 complex subunit mu-2 OS=Homo sapiens GN=AP3M2 PE=2 SV=1 1 436 2.0E-39
sp|P53678|AP3M2_RAT AP-3 complex subunit mu-2 OS=Rattus norvegicus GN=Ap3m2 PE=2 SV=1 1 436 2.0E-38
sp|Q8R2R9|AP3M2_MOUSE AP-3 complex subunit mu-2 OS=Mus musculus GN=Ap3m2 PE=1 SV=1 1 436 3.0E-38
sp|Q9GPF0|AP4M_DICDI AP-4 complex subunit mu OS=Dictyostelium discoideum GN=apm4 PE=2 SV=1 169 436 1.0E-30
sp|P38700|APM2_YEAST Adaptin medium chain homolog APM2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=APM2 PE=1 SV=1 156 428 1.0E-20
sp|Q9GPF0|AP4M_DICDI AP-4 complex subunit mu OS=Dictyostelium discoideum GN=apm4 PE=2 SV=1 1 158 3.0E-19
sp|Q8WXE9|STON2_HUMAN Stonin-2 OS=Homo sapiens GN=STON2 PE=1 SV=1 164 426 4.0E-16
sp|D4AB66|STON2_RAT Stonin-2 OS=Rattus norvegicus GN=Ston2 PE=1 SV=1 164 426 2.0E-15
sp|Q8BZ60|STON2_MOUSE Stonin-2 OS=Mus musculus GN=Ston2 PE=1 SV=1 164 426 5.0E-15
sp|O94669|AP3M_SCHPO AP-3 complex subunit mu OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=apm3 PE=3 SV=1 60 391 1.0E-14
sp|Q8CDJ8|STON1_MOUSE Stonin-1 OS=Mus musculus GN=Ston1 PE=1 SV=2 166 412 3.0E-14
sp|Q750L8|AP3M_ASHGO AP-3 complex subunit mu OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=APM3 PE=3 SV=2 143 436 2.0E-13
sp|Q9Y6Q2|STON1_HUMAN Stonin-1 OS=Homo sapiens GN=STON1 PE=1 SV=2 161 436 2.0E-10
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GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 33 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauG2|4867
MISGVLIFNQKGENLIFRAFRNDCRPRLADVFRIQVISNAQVRSPILTLGSTTFSHVKHENIYLVAITKSNANAA
LVFEFLYRLIQLGKGYFGKLDEEAVKSNFVLVYELLDEIIDFGYPQNTETDTLKMYITTEGVKSEARPEDTSKIT
MQATGALSWRKADVKYRKNEAFVDVIEDVNLLMSAAGAVLRADVTGQIVMRAYLSGTPECKFGLNDRLLLDNDGL
QSYPSGNRTGSKATKAAAGSVTLEDCQFHQCVKLGKFDTDRIISFVPPDGEFELMRYRATENVNLPFKVHVIVNE
VGRSKVEYSISVKANFGPKLYATNVVVRIPTPLNTAKISERCTQGKAKYEPSENNIVWKIGRFTGQNEYVLSAEA
FLTSMTNQRAWSRPPLSINFSLLMFTSSGLLVRYLKVFEKSNYSSVKWVRYMTRAGSYEIRF*
Coding >OphauG2|4867
ATGATCTCGGGCGTCCTCATCTTCAACCAGAAAGGCGAGAACCTTATTTTCCGGGCCTTTCGCAACGACTGCCGC
CCCCGCCTGGCCGATGTTTTTCGCATCCAGGTGATATCCAATGCGCAGGTGCGGTCGCCCATCTTGACGCTGGGC
AGCACCACGTTTAGCCATGTCAAGCACGAAAACATATACCTGGTGGCCATTACCAAGAGCAACGCCAATGCGGCC
CTGGTGTTTGAGTTTCTCTACCGCCTCATCCAGCTGGGCAAGGGCTACTTTGGCAAGCTGGACGAGGAGGCGGTC
AAGAGCAATTTTGTGCTTGTCTATGAGCTGCTAGATGAAATCATCGACTTTGGCTATCCGCAAAACACCGAGACC
GACACGCTCAAAATGTACATCACCACCGAGGGCGTCAAGTCGGAGGCGCGCCCCGAGGACACGTCCAAAATCACC
ATGCAGGCCACGGGCGCCCTGTCGTGGCGCAAGGCCGACGTCAAGTACCGCAAGAACGAGGCCTTTGTCGATGTC
ATTGAAGACGTCAACCTGCTCATGTCGGCCGCTGGCGCCGTGCTCCGAGCCGATGTCACGGGCCAGATTGTCATG
CGCGCCTATCTCTCGGGCACTCCCGAGTGCAAGTTTGGCCTCAATGACCGCTTGCTGCTCGACAACGACGGCCTG
CAGAGCTATCCCAGCGGCAACCGCACCGGCTCAAAGGCCACCAAGGCCGCCGCCGGCAGCGTCACCCTCGAGGAC
TGCCAGTTCCACCAATGCGTCAAGCTGGGCAAATTCGACACGGACCGCATCATCAGCTTCGTCCCTCCCGACGGC
GAGTTTGAGCTGATGCGCTACCGCGCCACGGAAAACGTCAACCTGCCCTTCAAGGTGCACGTCATTGTCAACGAG
GTCGGCCGCTCCAAGGTCGAGTACAGCATCAGCGTCAAGGCCAACTTTGGCCCCAAGCTCTATGCCACCAACGTC
GTCGTGCGCATCCCCACGCCCCTCAACACCGCCAAGATATCCGAGCGCTGCACCCAGGGCAAGGCCAAGTATGAG
CCGAGTGAAAACAACATTGTCTGGAAGATTGGCCGCTTCACCGGCCAAAACGAGTATGTCCTGAGCGCCGAGGCC
TTTCTCACCAGCATGACCAATCAGCGCGCCTGGAGCCGCCCGCCCCTGAGCATCAACTTTAGCCTGCTCATGTTT
ACCAGCTCGGGGCTGCTCGTCAGGTACCTCAAGGTCTTTGAGAAGAGCAATTACTCCAGCGTCAAGTGGGTGCGC
TATATGACGAGAGCAGGCTCCTACGAGATACGCTTTTGA
Transcript >OphauG2|4867
ATGATCTCGGGCGTCCTCATCTTCAACCAGAAAGGCGAGAACCTTATTTTCCGGGCCTTTCGCAACGACTGCCGC
CCCCGCCTGGCCGATGTTTTTCGCATCCAGGTGATATCCAATGCGCAGGTGCGGTCGCCCATCTTGACGCTGGGC
AGCACCACGTTTAGCCATGTCAAGCACGAAAACATATACCTGGTGGCCATTACCAAGAGCAACGCCAATGCGGCC
CTGGTGTTTGAGTTTCTCTACCGCCTCATCCAGCTGGGCAAGGGCTACTTTGGCAAGCTGGACGAGGAGGCGGTC
AAGAGCAATTTTGTGCTTGTCTATGAGCTGCTAGATGAAATCATCGACTTTGGCTATCCGCAAAACACCGAGACC
GACACGCTCAAAATGTACATCACCACCGAGGGCGTCAAGTCGGAGGCGCGCCCCGAGGACACGTCCAAAATCACC
ATGCAGGCCACGGGCGCCCTGTCGTGGCGCAAGGCCGACGTCAAGTACCGCAAGAACGAGGCCTTTGTCGATGTC
ATTGAAGACGTCAACCTGCTCATGTCGGCCGCTGGCGCCGTGCTCCGAGCCGATGTCACGGGCCAGATTGTCATG
CGCGCCTATCTCTCGGGCACTCCCGAGTGCAAGTTTGGCCTCAATGACCGCTTGCTGCTCGACAACGACGGCCTG
CAGAGCTATCCCAGCGGCAACCGCACCGGCTCAAAGGCCACCAAGGCCGCCGCCGGCAGCGTCACCCTCGAGGAC
TGCCAGTTCCACCAATGCGTCAAGCTGGGCAAATTCGACACGGACCGCATCATCAGCTTCGTCCCTCCCGACGGC
GAGTTTGAGCTGATGCGCTACCGCGCCACGGAAAACGTCAACCTGCCCTTCAAGGTGCACGTCATTGTCAACGAG
GTCGGCCGCTCCAAGGTCGAGTACAGCATCAGCGTCAAGGCCAACTTTGGCCCCAAGCTCTATGCCACCAACGTC
GTCGTGCGCATCCCCACGCCCCTCAACACCGCCAAGATATCCGAGCGCTGCACCCAGGGCAAGGCCAAGTATGAG
CCGAGTGAAAACAACATTGTCTGGAAGATTGGCCGCTTCACCGGCCAAAACGAGTATGTCCTGAGCGCCGAGGCC
TTTCTCACCAGCATGACCAATCAGCGCGCCTGGAGCCGCCCGCCCCTGAGCATCAACTTTAGCCTGCTCATGTTT
ACCAGCTCGGGGCTGCTCGTCAGGTACCTCAAGGTCTTTGAGAAGAGCAATTACTCCAGCGTCAAGTGGGTGCGC
TATATGACGAGAGCAGGCTCCTACGAGATACGCTTTTGA
Gene >OphauG2|4867
ATGATCTCGGGCGTCCTCATCTTCAACCAGAAAGGCGAGAACCTTATTTTCCGGGCCTTTCGCAACGACTGCCGC
CCCCGCCTGGCCGATGTTTTTCGCATCCAGGTGATATCCAATGCGCAGGTGCGGTCGCCCATCTTGACGCTGGGC
AGCACCACGTTTAGCCATGTCAAGCACGAAAACATATACCTGGTGGCCATTACCAAGAGCAACGCCAATGCGGCC
CTGGTGTTTGAGTTTCTCTACCGCCTCATCCAGCTGGGCAAGGGCTACTTTGGCAAGCTGGACGAGGAGGCGGTC
AAGAGCAATTTTGTGCTTGTCTATGAGCTGCTAGATGGTGAGCACGGGTGCTTGTCCTTGTTGTTCTCCTTGTTG
TTCTCCTTGTTGTTCTATGCTTGGTCTCACGCCTTGGCGCGCACAGAAATCATCGACTTTGGCTATCCGCAAAAC
ACCGAGACCGACACGCTCAAAATGTACATCACCACCGAGGGCGTCAAGTCGGAGGCGCGCCCCGAGGACACGTCC
AAAATCACCATGCAGGCCACGGGCGCCCTGTCGTGGCGCAAGGCCGACGTCAAGTACCGCAAGAACGAGGCCTTT
GTCGATGTCATTGAAGACGTCAACCTGCTCATGTCGGCCGCTGGCGCCGTGCTCCGAGCCGATGTCACGGGCCAG
ATTGTCATGCGCGCCTATCTCTCGGGCACTCCCGAGTGCAAGTTTGGCCTCAATGACCGCTTGCTGCTCGACAAC
GACGGCCTGCAGAGCTATCCCAGCGGCAACCGCACCGGCTCAAAGGCCACCAAGGCCGCCGCCGGCAGCGTCACC
CTCGAGGACTGCCAGTTCCACCAATGCGTCAAGCTGGGCAAATTCGACACGGACCGCATCATCAGCTTCGTCCCT
CCCGACGGCGAGTTTGAGCTGATGCGCTACCGCGCCACGGAAAACGTCAACCTGCCCTTCAAGGTGCACGTCATT
GTCAACGAGGTCGGCCGCTCCAAGGTCGAGTACAGCATCAGCGTCAAGGCCAACTTTGGCCCCAAGCTCTATGCC
ACCAACGTCGTCGTGCGCATCCCCACGCCCCTCAACACCGCCAAGATATCCGAGCGCTGCACCCAGGGCAAGGCC
AAGTATGAGCCGAGTGAAAACAACATTGTCTGGAAGATTGGCCGCTTCACCGGCCAAAACGAGTATGTCCTGAGC
GCCGAGGCCTTTCTCACCAGCATGACCAATCAGCGCGCCTGGAGCCGCCCGCCCCTGAGCATCAACTTTAGCCTG
CTCATGTTTACCAGCTCGGGGCTGCTCGTCAGGTACCTCAAGGTCTTTGAGAAGAGCAATTACTCCAGCGTCAAG
TGGGTGCGCTATATGACGAGAGCAGGCTCCTACGAGATACGGTCAGCCTCCATCCCCATTCCTATGCTCTGCACC
CCACCAGCTAACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTGCACAGCTTTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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