Fungal Genomics

at Utrecht University

General Properties

Protein ID	OphauG2\|4860
Gene name
Location	Contig_42:40305..40970
Strand	+
Gene length (bp)	665
Transcript length (bp)	552
Coding sequence length (bp)	552
Protein length (aa)	184

PFAM Domains

(None)

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q01302\|CCG6_NEUCR	Clock-controlled protein 6 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=ccg-6 PE=2 SV=2	25	183	5.0E-32
sp\|P40092\|SPI1_YEAST	Uncharacterized cell wall protein SPI1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SPI1 PE=2 SV=1	18	90	2.0E-11
sp\|Q01589\|SED1_YEAST	Cell wall protein SED1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SED1 PE=1 SV=1	30	71	4.0E-11

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
Yes	1 - 18	0.45

Transmembrane Domains

Domain #	Start	End	Length
1	160	182	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>OphauG2\|4860 MKFTAAAVLAAAAGASAHYGNNGTTVVTEVVDKYVTYCPGPTSIVHGSKTYTVTEATTLTITDCPCTITKPVTTV SSVICHTCAPSNSANPIYTPAPNTPAVPVPAVSSGYTNGTAPAGKSSAVAPTSPPEASVPVGTGAPPPAGGVSVT SAPTSLPTAGASSVAALSGAGLLGLFGFVALVL*
Coding	>OphauG2\|4860 ATGAAGTTTACTGCTGCTGCTGTCCTGGCCGCTGCCGCCGGCGCCTCTGCCCACTATGGCAACAATGGCACCACT GTCGTTACTGAGGTTGTCGACAAGTACGTCACGTACTGCCCGGGCCCTACCTCCATCGTACACGGCTCCAAGACC TACACCGTCACTGAGGCCACCACCCTAACAATCACCGATTGCCCTTGCACCATCACGAAGCCTGTCACGACGGTT TCGTCTGTCATCTGCCACACTTGCGCCCCTAGCAACTCGGCCAACCCCATCTACACTCCCGCCCCCAACACTCCC GCCGTCCCTGTTCCCGCCGTGTCGTCTGGCTACACCAACGGTACTGCGCCCGCGGGCAAGTCATCGGCCGTTGCT CCCACCAGCCCCCCCGAGGCCAGTGTGCCCGTTGGCACCGGTGCCCCCCCGCCTGCCGGTGGCGTGTCGGTTACT AGCGCACCCACCTCGCTCCCCACTGCCGGTGCTTCCAGTGTTGCTGCTCTCTCCGGTGCCGGTCTTCTCGGTCTC TTTGGCTTCGTTGCCTTGGTGCTGTAA
Transcript	>OphauG2\|4860 ATGAAGTTTACTGCTGCTGCTGTCCTGGCCGCTGCCGCCGGCGCCTCTGCCCACTATGGCAACAATGGCACCACT GTCGTTACTGAGGTTGTCGACAAGTACGTCACGTACTGCCCGGGCCCTACCTCCATCGTACACGGCTCCAAGACC TACACCGTCACTGAGGCCACCACCCTAACAATCACCGATTGCCCTTGCACCATCACGAAGCCTGTCACGACGGTT TCGTCTGTCATCTGCCACACTTGCGCCCCTAGCAACTCGGCCAACCCCATCTACACTCCCGCCCCCAACACTCCC GCCGTCCCTGTTCCCGCCGTGTCGTCTGGCTACACCAACGGTACTGCGCCCGCGGGCAAGTCATCGGCCGTTGCT CCCACCAGCCCCCCCGAGGCCAGTGTGCCCGTTGGCACCGGTGCCCCCCCGCCTGCCGGTGGCGTGTCGGTTACT AGCGCACCCACCTCGCTCCCCACTGCCGGTGCTTCCAGTGTTGCTGCTCTCTCCGGTGCCGGTCTTCTCGGTCTC TTTGGCTTCGTTGCCTTGGTGCTGTAA
Gene	>OphauG2\|4860 ATGAAGTTTACTGCTGCTGCTGTCCTGGCCGCTGCCGCCGGCGCCTCTGCCCACTATGGCAACAATGGCACCACT GTCGTTACTGAGGTTGTCGACAAGTACGTCACGTACTGCCCGGGCCCTACCTCCATCGTACACGGCTCCAAGACC TACACCGTCACTGAGGTAAGACTTTTGATAACAAATGTTGCCTTTTACAATGAGCTGACAGCATCTCCAGGCCAC CACCCTAACAATCACCGATTGCCCTTGCACCATCACGAAGCCTGTCACGACGGTTTCGTCTGTCATCTGCCACAC TTGGTATGTTGCATCATGGACTCATGTCTCTTCATCTTGGCATAAGTTAACAATATGGCAGCGCCCCTAGCAACT CGGCCAACCCCATCTACACTCCCGCCCCCAACACTCCCGCCGTCCCTGTTCCCGCCGTGTCGTCTGGCTACACCA ACGGTACTGCGCCCGCGGGCAAGTCATCGGCCGTTGCTCCCACCAGCCCCCCCGAGGCCAGTGTGCCCGTTGGCA CCGGTGCCCCCCCGCCTGCCGGTGGCGTGTCGGTTACTAGCGCACCCACCTCGCTCCCCACTGCCGGTGCTTCCA GTGTTGCTGCTCTCTCCGGTGCCGGTCTTCTCGGTCTCTTTGGCTTCGTTGCCTTGGTGCTGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail