Fungal Genomics

at Utrecht University

General Properties

Protein ID	OphauG2\|4846
Gene name
Location	Contig_42:1190..2000
Strand	+
Gene length (bp)	810
Transcript length (bp)	810
Coding sequence length (bp)	810
Protein length (aa)	270

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF00702	Hydrolase	haloacid dehalogenase-like hydrolase	3.3E-11	12	219
PF13419	HAD_2	Haloacid dehalogenase-like hydrolase	1.5E-06	124	225
PF13242	Hydrolase_like	HAD-hyrolase-like	3.6E-05	182	230

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q51645\|HAD4_BURCE	(S)-2-haloacid dehalogenase 4A OS=Burkholderia cepacia GN=hdl IVa PE=1 SV=3	9	230	2.0E-10
sp\|P24069\|HAD1_PSEUC	(S)-2-haloacid dehalogenase 1 OS=Pseudomonas sp. (strain CBS-3) PE=3 SV=2	12	227	4.0E-09
sp\|Q60099\|HAD_XANAU	(S)-2-haloacid dehalogenase OS=Xanthobacter autotrophicus GN=dhlB PE=1 SV=2	12	264	2.0E-08
sp\|Q53464\|HAD_PSEUY	(S)-2-haloacid dehalogenase OS=Pseudomonas sp. (strain YL) PE=1 SV=1	116	230	1.0E-07
sp\|Q59728\|HAD9_PSEPU	(S)-2-haloacid dehalogenase H-109 OS=Pseudomonas putida GN=dehH109 PE=3 SV=1	12	229	1.0E-07

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 17	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>OphauG2\|4846 MSPSAAHPISRVKALAFDVFGTVVDWRTSVVDELVLRAHRKAVAADTPTATCERLRTADWARFAQQWRDAYSVFT RSFERGRDAWKSVDDHHRESLAAILAEWGFNDVYSDSELDSLALVWHRLAPWPDAIHGLAALRGPSESRYTLATL SNANLSLLQDLDDYSSLGFHHLFSAEMFGAYKPDESTYRGAAQRLGLDTSEVAMVAAHLADLDAARACGLRTVYV ERRGEEAWPKDDERYQHAREWVDVWISEDETGFMALSTRLQHLS*
Coding	>OphauG2\|4846 ATGTCGCCGTCAGCCGCACATCCCATTTCCCGCGTCAAGGCCCTTGCCTTTGACGTCTTTGGCACAGTGGTAGAC TGGCGCACCTCTGTCGTCGACGAGCTTGTCCTGCGCGCCCACCGCAAGGCCGTCGCAGCCGACACGCCCACGGCC ACATGCGAGCGCCTCAGGACCGCCGACTGGGCCCGCTTCGCACAGCAGTGGCGCGACGCATACTCTGTCTTTACG CGGAGCTTTGAGCGCGGCCGCGATGCGTGGAAATCCGTCGACGACCACCATCGCGAGAGCCTGGCCGCAATCCTC GCCGAATGGGGATTCAACGACGTGTATTCCGACTCGGAGCTTGATTCGCTTGCTCTCGTCTGGCATCGGCTAGCG CCCTGGCCCGATGCAATCCATGGACTGGCTGCGCTGCGTGGTCCGTCTGAATCACGATACACGCTCGCCACGCTA TCCAATGCAAACCTGTCGCTGCTGCAAGACCTGGACGATTACAGCAGTCTTGGCTTCCATCACTTGTTCTCGGCC GAGATGTTTGGCGCGTACAAGCCTGACGAGTCGACATATCGCGGCGCGGCCCAGCGCCTTGGCCTGGATACCTCA GAGGTGGCCATGGTGGCTGCCCATCTCGCTGATCTTGATGCCGCGCGCGCGTGTGGCTTGCGGACCGTCTATGTT GAGAGACGCGGCGAGGAGGCGTGGCCCAAGGACGACGAGCGCTATCAGCACGCCCGCGAATGGGTAGATGTGTGG ATCTCGGAAGACGAGACTGGCTTCATGGCCCTTTCTACTCGATTGCAGCATCTCTCTTGA
Transcript	>OphauG2\|4846 ATGTCGCCGTCAGCCGCACATCCCATTTCCCGCGTCAAGGCCCTTGCCTTTGACGTCTTTGGCACAGTGGTAGAC TGGCGCACCTCTGTCGTCGACGAGCTTGTCCTGCGCGCCCACCGCAAGGCCGTCGCAGCCGACACGCCCACGGCC ACATGCGAGCGCCTCAGGACCGCCGACTGGGCCCGCTTCGCACAGCAGTGGCGCGACGCATACTCTGTCTTTACG CGGAGCTTTGAGCGCGGCCGCGATGCGTGGAAATCCGTCGACGACCACCATCGCGAGAGCCTGGCCGCAATCCTC GCCGAATGGGGATTCAACGACGTGTATTCCGACTCGGAGCTTGATTCGCTTGCTCTCGTCTGGCATCGGCTAGCG CCCTGGCCCGATGCAATCCATGGACTGGCTGCGCTGCGTGGTCCGTCTGAATCACGATACACGCTCGCCACGCTA TCCAATGCAAACCTGTCGCTGCTGCAAGACCTGGACGATTACAGCAGTCTTGGCTTCCATCACTTGTTCTCGGCC GAGATGTTTGGCGCGTACAAGCCTGACGAGTCGACATATCGCGGCGCGGCCCAGCGCCTTGGCCTGGATACCTCA GAGGTGGCCATGGTGGCTGCCCATCTCGCTGATCTTGATGCCGCGCGCGCGTGTGGCTTGCGGACCGTCTATGTT GAGAGACGCGGCGAGGAGGCGTGGCCCAAGGACGACGAGCGCTATCAGCACGCCCGCGAATGGGTAGATGTGTGG ATCTCGGAAGACGAGACTGGCTTCATGGCCCTTTCTACTCGATTGCAGCATCTCTCTTGA
Gene	>OphauG2\|4846 ATGTCGCCGTCAGCCGCACATCCCATTTCCCGCGTCAAGGCCCTTGCCTTTGACGTCTTTGGCACAGTGGTAGAC TGGCGCACCTCTGTCGTCGACGAGCTTGTCCTGCGCGCCCACCGCAAGGCCGTCGCAGCCGACACGCCCACGGCC ACATGCGAGCGCCTCAGGACCGCCGACTGGGCCCGCTTCGCACAGCAGTGGCGCGACGCATACTCTGTCTTTACG CGGAGCTTTGAGCGCGGCCGCGATGCGTGGAAATCCGTCGACGACCACCATCGCGAGAGCCTGGCCGCAATCCTC GCCGAATGGGGATTCAACGACGTGTATTCCGACTCGGAGCTTGATTCGCTTGCTCTCGTCTGGCATCGGCTAGCG CCCTGGCCCGATGCAATCCATGGACTGGCTGCGCTGCGTGGTCCGTCTGAATCACGATACACGCTCGCCACGCTA TCCAATGCAAACCTGTCGCTGCTGCAAGACCTGGACGATTACAGCAGTCTTGGCTTCCATCACTTGTTCTCGGCC GAGATGTTTGGCGCGTACAAGCCTGACGAGTCGACATATCGCGGCGCGGCCCAGCGCCTTGGCCTGGATACCTCA GAGGTGGCCATGGTGGCTGCCCATCTCGCTGATCTTGATGCCGCGCGCGCGTGTGGCTTGCGGACCGTCTATGTT GAGAGACGCGGCGAGGAGGCGTGGCCCAAGGACGACGAGCGCTATCAGCACGCCCGCGAATGGGTAGATGTGTGG ATCTCGGAAGACGAGACTGGCTTCATGGCCCTTTCTACTCGATTGCAGCATCTCTCTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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