© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauG2|482 |
| Gene name | |
| Location | Contig_1109:4859..5857 |
| Strand | + |
| Gene length (bp) | 998 |
| Transcript length (bp) | 942 |
| Coding sequence length (bp) | 942 |
| Protein length (aa) | 314 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00909 | Ammonium_transp | Ammonium Transporter Family | 1.5E-66 | 38 | 283 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9US00|AMT2_SCHPO | Ammonium transporter 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=amt2 PE=3 SV=1 | 19 | 281 | 6.0E-94 |
| sp|Q9C0V1|AMT1_SCHPO | Ammonium transporter 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=amt1 PE=3 SV=1 | 18 | 285 | 7.0E-93 |
| sp|P40260|MEP1_YEAST | Ammonium transporter MEP1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MEP1 PE=1 SV=1 | 19 | 286 | 2.0E-90 |
| sp|P53390|MEP3_YEAST | Ammonium transporter MEP3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MEP3 PE=1 SV=1 | 29 | 286 | 5.0E-89 |
| sp|P41948|MEP2_YEAST | Ammonium transporter MEP2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MEP2 PE=1 SV=1 | 22 | 286 | 1.0E-75 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9US00|AMT2_SCHPO | Ammonium transporter 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=amt2 PE=3 SV=1 | 19 | 281 | 6.0E-94 |
| sp|Q9C0V1|AMT1_SCHPO | Ammonium transporter 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=amt1 PE=3 SV=1 | 18 | 285 | 7.0E-93 |
| sp|P40260|MEP1_YEAST | Ammonium transporter MEP1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MEP1 PE=1 SV=1 | 19 | 286 | 2.0E-90 |
| sp|P53390|MEP3_YEAST | Ammonium transporter MEP3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MEP3 PE=1 SV=1 | 29 | 286 | 5.0E-89 |
| sp|P41948|MEP2_YEAST | Ammonium transporter MEP2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MEP2 PE=1 SV=1 | 22 | 286 | 1.0E-75 |
| sp|Q9P7F3|AMT3_SCHPO | Ammonium transporter 3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=amt3 PE=3 SV=1 | 23 | 286 | 1.0E-58 |
| sp|Q9BLG4|AMT1_DICDI | Ammonium transporter 1 OS=Dictyostelium discoideum GN=amtA PE=1 SV=1 | 17 | 279 | 8.0E-46 |
| sp|P69681|AMTB_ECOLI | Ammonia channel OS=Escherichia coli (strain K12) GN=amtB PE=1 SV=1 | 33 | 286 | 9.0E-46 |
| sp|P69680|AMTB_ECO57 | Ammonia channel OS=Escherichia coli O157:H7 GN=amtB PE=1 SV=1 | 33 | 286 | 9.0E-46 |
| sp|P9WQ65|AMT_MYCTU | Probable ammonia channel OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=amt PE=3 SV=1 | 33 | 255 | 4.0E-45 |
| sp|P9WQ64|AMT_MYCTO | Probable ammonia channel OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=amt PE=3 SV=1 | 33 | 255 | 4.0E-45 |
| sp|P63520|AMT_MYCBO | Probable ammonia channel OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=amt PE=3 SV=1 | 33 | 255 | 4.0E-45 |
| sp|O26759|Y663_METTH | Putative ammonium transporter MTH_663 OS=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) GN=MTH_663 PE=3 SV=1 | 28 | 286 | 2.0E-44 |
| sp|O26757|Y661_METTH | Putative ammonium transporter MTH_661 OS=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) GN=MTH_661 PE=3 SV=1 | 33 | 280 | 5.0E-44 |
| sp|Q07429|NRGA_BACSU | Ammonium transporter NrgA OS=Bacillus subtilis (strain 168) GN=nrgA PE=2 SV=1 | 33 | 286 | 6.0E-44 |
| sp|O66515|AMT_AQUAE | Ammonia channel OS=Aquifex aeolicus (strain VF5) GN=amt PE=1 SV=1 | 33 | 280 | 2.0E-40 |
| sp|P54146|AMT_CORGL | Ammonia channel OS=Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025) GN=amt PE=2 SV=1 | 36 | 286 | 1.0E-28 |
| sp|Q851M9|AMT32_ORYSJ | Ammonium transporter 3 member 2 OS=Oryza sativa subsp. japonica GN=AMT3-2 PE=2 SV=1 | 23 | 286 | 2.0E-28 |
| sp|Q84KJ6|AMT31_ORYSJ | Ammonium transporter 3 member 1 OS=Oryza sativa subsp. japonica GN=AMT3-1 PE=2 SV=1 | 30 | 286 | 4.0E-26 |
| sp|Q9M6N7|AMT2_ARATH | Ammonium transporter 2 OS=Arabidopsis thaliana GN=AMT2 PE=1 SV=2 | 22 | 280 | 2.0E-25 |
| sp|Q84KJ7|AMT21_ORYSJ | Ammonium transporter 2 member 1 OS=Oryza sativa subsp. japonica GN=AMT2-1 PE=2 SV=1 | 30 | 286 | 2.0E-24 |
| sp|P54147|Y108_SYNY3 | Putative ammonium transporter sll0108 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=sll0108 PE=3 SV=1 | 22 | 273 | 3.0E-24 |
| sp|Q9SVT8|AMT14_ARATH | Ammonium transporter 1 member 4 OS=Arabidopsis thaliana GN=AMT1-4 PE=1 SV=1 | 22 | 250 | 5.0E-24 |
| sp|Q8S233|AMT23_ORYSJ | Ammonium transporter 2 member 3 OS=Oryza sativa subsp. japonica GN=AMT2-3 PE=2 SV=1 | 30 | 280 | 7.0E-24 |
| sp|Q69T29|AMT33_ORYSJ | Ammonium transporter 3 member 3 OS=Oryza sativa subsp. japonica GN=AMT3-3 PE=2 SV=1 | 23 | 280 | 8.0E-24 |
| sp|O04161|AMT12_SOLLC | Ammonium transporter 1 member 2 OS=Solanum lycopersicum GN=AMT1-2 PE=2 SV=1 | 23 | 250 | 4.0E-23 |
| sp|Q9SQH9|AMT13_ARATH | Ammonium transporter 1 member 3 OS=Arabidopsis thaliana GN=AMT1-3 PE=2 SV=2 | 8 | 250 | 5.0E-23 |
| sp|Q6K9G3|AMT13_ORYSJ | Ammonium transporter 1 member 3 OS=Oryza sativa subsp. japonica GN=AMT1-3 PE=2 SV=1 | 36 | 250 | 9.0E-23 |
| sp|Q9LK16|AMT15_ARATH | Putative ammonium transporter 1 member 5 OS=Arabidopsis thaliana GN=AMT1-5 PE=3 SV=1 | 8 | 250 | 1.0E-22 |
| sp|Q9ZPJ8|AMT12_ARATH | Ammonium transporter 1 member 2 OS=Arabidopsis thaliana GN=AMT1-2 PE=1 SV=1 | 25 | 250 | 1.0E-22 |
| sp|Q7XQ12|AMT11_ORYSJ | Ammonium transporter 1 member 1 OS=Oryza sativa subsp. japonica GN=AMT1-1 PE=2 SV=1 | 9 | 250 | 1.0E-22 |
| sp|P54144|AMT11_ARATH | Ammonium transporter 1 member 1 OS=Arabidopsis thaliana GN=AMT1-1 PE=1 SV=1 | 36 | 250 | 2.0E-22 |
| sp|Q8S230|AMT22_ORYSJ | Ammonium transporter 2 member 2 OS=Oryza sativa subsp. japonica GN=AMT2-2 PE=2 SV=2 | 31 | 280 | 5.0E-22 |
| sp|Q6K9G1|AMT12_ORYSJ | Ammonium transporter 1 member 2 OS=Oryza sativa subsp. japonica GN=AMT1-2 PE=2 SV=1 | 36 | 250 | 1.0E-21 |
| sp|P58905|AMT11_SOLLC | Ammonium transporter 1 member 1 OS=Solanum lycopersicum GN=AMT1-1 PE=2 SV=1 | 36 | 250 | 9.0E-21 |
| sp|Q9FVN0|AMT13_SOLLC | Ammonium transporter 1 member 3 OS=Solanum lycopersicum GN=AMT1-3 PE=2 SV=1 | 39 | 250 | 7.0E-19 |
| sp|Q9BLG3|AMT2_DICDI | Ammonium transporter 2 OS=Dictyostelium discoideum GN=amtB PE=1 SV=1 | 36 | 277 | 3.0E-18 |
| sp|Q8MXY0|AMT3_DICDI | Ammonium transporter 3 OS=Dictyostelium discoideum GN=amtC PE=2 SV=1 | 36 | 260 | 1.0E-16 |
| sp|P54145|AMT1_CAEEL | Putative ammonium transporter 1 OS=Caenorhabditis elegans GN=amt-1 PE=3 SV=1 | 9 | 301 | 2.0E-16 |
| sp|P54148|Y537_SYNY3 | Putative ammonium transporter sll0537 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=sll0537 PE=3 SV=1 | 36 | 253 | 3.0E-15 |
| sp|Q21565|AMT3_CAEEL | Putative ammonium transporter 3 OS=Caenorhabditis elegans GN=amt-3 PE=3 SV=2 | 23 | 253 | 1.0E-10 |
| sp|P72935|Y1017_SYNY3 | Putative ammonium transporter sll1017 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=sll1017 PE=3 SV=1 | 36 | 275 | 2.0E-10 |
| sp|Q60366|Y058_METJA | Putative ammonium transporter MJ0058 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ0058 PE=3 SV=1 | 134 | 253 | 1.0E-09 |
| sp|Q20605|AMT2_CAEEL | Putative ammonium transporter 2 OS=Caenorhabditis elegans GN=amt-2 PE=3 SV=3 | 25 | 252 | 2.0E-09 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0008519 | ammonium transmembrane transporter activity | Yes |
| GO:0016020 | membrane | Yes |
| GO:0072488 | ammonium transmembrane transport | Yes |
| GO:0008324 | cation transmembrane transporter activity | No |
| GO:0034220 | ion transmembrane transport | No |
| GO:0051179 | localization | No |
| GO:0022803 | passive transmembrane transporter activity | No |
| GO:0051234 | establishment of localization | No |
| GO:0055085 | transmembrane transport | No |
| GO:0006811 | ion transport | No |
| GO:0008150 | biological_process | No |
| GO:0098660 | inorganic ion transmembrane transport | No |
| GO:0071705 | nitrogen compound transport | No |
| GO:0015267 | channel activity | No |
| GO:0009987 | cellular process | No |
| GO:0005575 | cellular_component | No |
| GO:0005215 | transporter activity | No |
| GO:0015318 | inorganic molecular entity transmembrane transporter activity | No |
| GO:0015075 | ion transmembrane transporter activity | No |
| GO:0022857 | transmembrane transporter activity | No |
| GO:0022890 | inorganic cation transmembrane transporter activity | No |
| GO:0003674 | molecular_function | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0098655 | cation transmembrane transport | No |
| GO:0098662 | inorganic cation transmembrane transport | No |
| GO:0006810 | transport | No |
| GO:0005261 | cation channel activity | No |
| GO:0005216 | ion channel activity | No |
| GO:0006812 | cation transport | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 69 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 38 | 60 | 22 |
| 2 | 67 | 89 | 22 |
| 3 | 128 | 150 | 22 |
| 4 | 155 | 177 | 22 |
| 5 | 192 | 214 | 22 |
| 6 | 227 | 246 | 19 |
| 7 | 256 | 278 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauG2|482 MSYAHVGAPTEFNATDKITGGDSTSENLNQWYQSGDQAFILVCCCLVLVMIPGVAFLYSGLARRKSALSMLWAVM MSCSVIVFQWYFWGYSLAFSSGSSNGFIGNLDHFGLIHVWAAPSVSSPLIPALLHSLFQMLFCAVTAALTVGAVA ERGRVVPAMVFIFCWATIVYCPLAYWVWNPNGWAAKHGVLDYAGGVPVEIGSGVSALAYSWVLGRRNSKMMANFR PHNISLIALGTTLLWFGWLGFNGGSAYGANLRAVMACWNSCLTSMFAAVTWCLLDFRLARKCLGLYRSLGQHYSR HRCRCCLQFWNQE* |
| Coding | >OphauG2|482 ATGTCGTACGCCCACGTCGGGGCGCCTACCGAATTCAATGCCACCGACAAAATCACTGGTGGCGACTCCACATCA GAGAACCTCAACCAGTGGTATCAGTCTGGCGACCAGGCCTTTATCCTCGTCTGCTGCTGTCTTGTCCTCGTCATG ATTCCTGGCGTCGCCTTTCTCTACTCGGGCCTTGCTCGCCGCAAGTCGGCCCTCTCCATGCTCTGGGCCGTCATG ATGTCGTGTTCCGTCATTGTCTTTCAATGGTACTTTTGGGGCTACTCTCTCGCCTTTTCCAGCGGCTCCTCAAAC GGCTTTATTGGAAACCTGGACCACTTTGGCCTGATCCACGTCTGGGCCGCTCCGTCGGTTAGCTCGCCTCTGATT CCGGCGCTCTTGCACTCGCTCTTTCAGATGCTGTTTTGTGCCGTCACTGCCGCCCTGACGGTTGGAGCGGTTGCC GAGCGTGGGCGCGTCGTCCCGGCCATGGTCTTCATCTTTTGCTGGGCCACCATTGTCTACTGTCCGCTGGCATAC TGGGTTTGGAATCCAAACGGCTGGGCCGCCAAGCACGGCGTGCTCGACTATGCTGGAGGCGTGCCTGTGGAGATT GGCTCGGGCGTTTCGGCCCTGGCCTATTCCTGGGTCTTGGGGCGCCGCAACAGCAAAATGATGGCCAACTTTCGC CCTCACAACATTTCCCTCATTGCCCTCGGCACCACCCTGCTTTGGTTCGGCTGGCTGGGCTTCAACGGCGGCTCG GCCTATGGCGCCAACCTGCGTGCCGTCATGGCCTGCTGGAACTCGTGCCTGACCTCCATGTTTGCCGCCGTGACC TGGTGTCTGCTCGACTTTCGTCTGGCGAGAAAGTGCCTCGGGCTATATCGATCCCTGGGCCAGCATTATTCTCGG CATCGTTGCCGGTGTTGCCTGCAATTTTGGAACCAAGAGTAA |
| Transcript | >OphauG2|482 ATGTCGTACGCCCACGTCGGGGCGCCTACCGAATTCAATGCCACCGACAAAATCACTGGTGGCGACTCCACATCA GAGAACCTCAACCAGTGGTATCAGTCTGGCGACCAGGCCTTTATCCTCGTCTGCTGCTGTCTTGTCCTCGTCATG ATTCCTGGCGTCGCCTTTCTCTACTCGGGCCTTGCTCGCCGCAAGTCGGCCCTCTCCATGCTCTGGGCCGTCATG ATGTCGTGTTCCGTCATTGTCTTTCAATGGTACTTTTGGGGCTACTCTCTCGCCTTTTCCAGCGGCTCCTCAAAC GGCTTTATTGGAAACCTGGACCACTTTGGCCTGATCCACGTCTGGGCCGCTCCGTCGGTTAGCTCGCCTCTGATT CCGGCGCTCTTGCACTCGCTCTTTCAGATGCTGTTTTGTGCCGTCACTGCCGCCCTGACGGTTGGAGCGGTTGCC GAGCGTGGGCGCGTCGTCCCGGCCATGGTCTTCATCTTTTGCTGGGCCACCATTGTCTACTGTCCGCTGGCATAC TGGGTTTGGAATCCAAACGGCTGGGCCGCCAAGCACGGCGTGCTCGACTATGCTGGAGGCGTGCCTGTGGAGATT GGCTCGGGCGTTTCGGCCCTGGCCTATTCCTGGGTCTTGGGGCGCCGCAACAGCAAAATGATGGCCAACTTTCGC CCTCACAACATTTCCCTCATTGCCCTCGGCACCACCCTGCTTTGGTTCGGCTGGCTGGGCTTCAACGGCGGCTCG GCCTATGGCGCCAACCTGCGTGCCGTCATGGCCTGCTGGAACTCGTGCCTGACCTCCATGTTTGCCGCCGTGACC TGGTGTCTGCTCGACTTTCGTCTGGCGAGAAAGTGCCTCGGGCTATATCGATCCCTGGGCCAGCATTATTCTCGG CATCGTTGCCGGTGTTGCCTGCAATTTTGGAACCAAGAGTAA |
| Gene | >OphauG2|482 ATGTCGTACGCCCACGTCGGGGCGCCTACCGAATTCAATGCCACCGACAAAATCACTGGTGGCGACTCCACATCA GAGAACCTCAACCAGTGGTATCAGTCTGGCGACCAGGCCTTTATCCTCGTCTGCTGCTGTCTTGTCCTCGTCATG ATTCCTGGCGTCGCCTTTCTCTACTCGGGCCTTGCTCGCCGCAAGTCGGCCCTCTCCATGCTCTGGGCCGTCATG ATGTCGTGTTCCGTCATTGTCTTTCAATGGTACTTTTGGGGCTACTCTCTCGCCTTTTCCAGCGGCTCCTCAAAC GGCTTTATTGGAAACCTGGACCACTTTGGCCTGATCCACGTCTGGGCCGCTCCGTCGGTTAGCTCGCCTCTGATT CCGGCGCTCTTGCACTCGCTCTTTCAGATGCTGTTTTGTGCCGTCACTGCCGCCCTGACGGTTGGAGCGGTTGCC GAGCGTGGGCGCGTCGTCCCGGCCATGGTCTTCATCTTTTGCTGGGCCACCATTGTCTACTGTCCGCTGGCATAC TGGGTTTGGAATCCAAACGGCTGGGCCGCCAAGCACGGCGTGCTCGACTATGCTGGAGGCGTGCCTGTGGAGATT GGCTCGGGCGTTTCGGCCCTGGCCTATTCCTGGGTCTTGGGGCGCCGCAACAGCAAAATGATGGCCAACTTTCGC CCTCACAACATTTCCCTCATTGCCCTCGGCACCACCCTGCTTTGGTTCGGCTGGCTGGGCTTCAACGGCGGCTCG GCCTATGGCGCCAACCTGCGTGCCGTCATGGCCTGCTGGAACTCGTGCCTGACCTCCATGTTTGCCGCCGTGACC TGGTGTCTGCTCGACTTTCGTCTGGCGAGAAAGTGGTCCATGGTCGGCTGGTGCTCGGGCGCCATCTCTGGCCTG GTGGCGGCGACTCCAGCCTCGGGCTATATCGATCCCTGGGCCAGCATTATTCTCGGCATCGTTGCCGGTGTTGCC TGCAATTTTGGAACCAAGAGTAA |