© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauG2|4807 |
| Gene name | |
| Location | Contig_412:14778..16053 |
| Strand | + |
| Gene length (bp) | 1275 |
| Transcript length (bp) | 1275 |
| Coding sequence length (bp) | 1275 |
| Protein length (aa) | 425 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00628 | PHD | PHD-finger | 3.0E-10 | 257 | 303 |
| PF13831 | PHD_2 | PHD-finger | 2.6E-10 | 270 | 302 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q29EQ3|RNO_DROPS | PHD finger protein rhinoceros OS=Drosophila pseudoobscura pseudoobscura GN=rno PE=3 SV=2 | 253 | 302 | 5.0E-11 |
| sp|O74759|NTO1_SCHPO | Mst2 complex subunit nto1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=nto1 PE=1 SV=1 | 251 | 302 | 6.0E-11 |
| sp|Q7YZH1|RNO_DROME | PHD finger protein rhinoceros OS=Drosophila melanogaster GN=rno PE=1 SV=1 | 253 | 302 | 6.0E-11 |
| sp|Q12311|NTO1_YEAST | NuA3 HAT complex component NTO1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=NTO1 PE=1 SV=1 | 245 | 302 | 1.0E-10 |
| sp|O95696|BRD1_HUMAN | Bromodomain-containing protein 1 OS=Homo sapiens GN=BRD1 PE=1 SV=1 | 253 | 304 | 3.0E-10 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q29EQ3|RNO_DROPS | PHD finger protein rhinoceros OS=Drosophila pseudoobscura pseudoobscura GN=rno PE=3 SV=2 | 253 | 302 | 5.0E-11 |
| sp|O74759|NTO1_SCHPO | Mst2 complex subunit nto1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=nto1 PE=1 SV=1 | 251 | 302 | 6.0E-11 |
| sp|Q7YZH1|RNO_DROME | PHD finger protein rhinoceros OS=Drosophila melanogaster GN=rno PE=1 SV=1 | 253 | 302 | 6.0E-11 |
| sp|Q12311|NTO1_YEAST | NuA3 HAT complex component NTO1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=NTO1 PE=1 SV=1 | 245 | 302 | 1.0E-10 |
| sp|O95696|BRD1_HUMAN | Bromodomain-containing protein 1 OS=Homo sapiens GN=BRD1 PE=1 SV=1 | 253 | 304 | 3.0E-10 |
| sp|Q9ULD4|BRPF3_HUMAN | Bromodomain and PHD finger-containing protein 3 OS=Homo sapiens GN=BRPF3 PE=1 SV=2 | 253 | 304 | 4.0E-10 |
| sp|P55201|BRPF1_HUMAN | Peregrin OS=Homo sapiens GN=BRPF1 PE=1 SV=2 | 253 | 304 | 5.0E-10 |
| sp|Q803A0|JADE1_DANRE | Protein Jade-1 OS=Danio rerio GN=jade1 PE=2 SV=1 | 253 | 303 | 8.0E-10 |
| sp|Q6IE82|JADE3_MOUSE | Protein Jade-3 OS=Mus musculus GN=Jade3 PE=1 SV=1 | 251 | 302 | 1.0E-09 |
| sp|Q6ZPI0|JADE1_MOUSE | Protein Jade-1 OS=Mus musculus GN=Jade1 PE=1 SV=2 | 253 | 303 | 1.0E-09 |
| sp|Q0P4S5|JADE3_XENTR | Protein Jade-3 OS=Xenopus tropicalis GN=jade3 PE=2 SV=1 | 251 | 302 | 2.0E-09 |
| sp|Q92613|JADE3_HUMAN | Protein Jade-3 OS=Homo sapiens GN=JADE3 PE=1 SV=1 | 253 | 302 | 2.0E-09 |
| sp|Q7ZVP1|JADE3_DANRE | Protein Jade-3 OS=Danio rerio GN=jade3 PE=2 SV=1 | 251 | 302 | 2.0E-09 |
| sp|Q6IE81|JADE1_HUMAN | Protein Jade-1 OS=Homo sapiens GN=JADE1 PE=1 SV=1 | 253 | 303 | 2.0E-09 |
| sp|Q6GQJ2|JADE1_XENLA | Protein Jade-1 OS=Xenopus laevis GN=jade1 PE=2 SV=1 | 253 | 303 | 3.0E-09 |
| sp|Q20318|LIN49_CAEEL | Protein lin-49 OS=Caenorhabditis elegans GN=lin-49 PE=1 SV=1 | 241 | 303 | 5.0E-09 |
| sp|Q5E9T7|JADE1_BOVIN | Protein Jade-1 OS=Bos taurus GN=JADE1 PE=2 SV=1 | 253 | 303 | 7.0E-09 |
| sp|Q6ZQF7|JADE2_MOUSE | Protein Jade-2 OS=Mus musculus GN=Jade2 PE=1 SV=2 | 253 | 303 | 2.0E-08 |
| sp|Q9NQC1|JADE2_HUMAN | Protein Jade-2 OS=Homo sapiens GN=JADE2 PE=1 SV=2 | 253 | 303 | 3.0E-08 |
| sp|Q9Y794|ORC4_SCHPO | Origin recognition complex subunit 4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=orc4 PE=1 SV=1 | 336 | 403 | 1.0E-07 |
| sp|P34447|YM2A_CAEEL | Uncharacterized protein F54F2.2, isoform a OS=Caenorhabditis elegans GN=F54F2.2/F54F2.3/F54F2.4 PE=3 SV=2 | 258 | 308 | 6.0E-06 |
| Orthofinder run ID | 4 |
| Orthogroup | 511 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauG2|4807 MSPGRKRRLGQPHADSQSPEASPCANKRPRLDSHGAGQSPSTPRALRAVASGALKLGLEQSQDTSLRAPASSKPS RPAIKLAALKGTRWDPGDIKTSARLGNSTASSRPPGQKSLHGRSRRAASTQHLDSSDKPDHARQDSPHELAATQN PSTRKTKAFARHDSPDELSAMETPSKRTAKSLPPSASKPATPKGILTPRRRPGRPPKNVSFDRKLQDEIFFQDLR KPASGKGNRASKSKKNKADADDGDDDDDDEIRCAICFKADSNPPNEIILCDNCDYSVHQLCYEVPQIPEGDWLCK ACGQQDVLESAEPSSAPQASSGPGASPAIPNLARHLQSLKRVLVDRCCGRRRLGIVGQTEPLEMARQLVEQTILA GQGNSMLFIGPRGSGKTTVSIDKQAKTASWLMDCKDDTKHHWPCKESTW* |
| Coding | >OphauG2|4807 ATGTCTCCTGGGCGTAAACGACGGCTGGGGCAGCCCCACGCAGATTCACAAAGCCCCGAAGCATCCCCATGCGCC AACAAGCGTCCCCGACTCGACAGCCACGGCGCTGGCCAGAGCCCGTCGACTCCCCGCGCTCTACGCGCTGTGGCA TCGGGTGCTCTGAAGCTGGGCCTGGAGCAGTCCCAAGACACGTCTCTGCGGGCCCCAGCCTCTTCCAAGCCCTCT CGGCCTGCTATCAAGCTTGCAGCTCTCAAGGGAACTAGATGGGACCCTGGAGACATCAAGACGAGTGCTCGGCTG GGCAATTCGACCGCATCTTCACGCCCACCTGGGCAAAAGTCGCTACATGGTCGCTCACGACGGGCAGCCTCGACC CAGCATTTGGATTCCAGCGACAAGCCGGACCATGCTCGTCAAGATTCTCCCCATGAGCTTGCCGCCACCCAAAAT CCGTCCACGCGCAAAACCAAGGCCTTTGCTCGCCACGACTCGCCCGACGAGCTTTCCGCAATGGAAACGCCTTCC AAGCGCACTGCCAAGTCATTGCCGCCCTCTGCCTCCAAGCCCGCAACTCCAAAAGGCATCCTCACCCCCCGCAGA AGGCCGGGGCGCCCCCCCAAAAACGTTAGTTTTGATAGAAAACTCCAGGACGAAATCTTTTTCCAAGACTTGCGC AAACCAGCCAGTGGGAAAGGGAACAGGGCATCCAAATCCAAGAAAAACAAGGCAGACGCCGACGACGGCGACGAT GATGATGATGATGAAATCCGATGCGCCATATGCTTCAAAGCCGACTCGAATCCGCCAAACGAAATTATACTCTGC GACAATTGCGACTACTCTGTACATCAGCTGTGCTACGAGGTTCCCCAAATACCAGAGGGCGACTGGCTGTGTAAA GCGTGTGGCCAACAAGACGTTTTGGAAAGCGCCGAGCCATCTTCTGCCCCCCAGGCTTCCTCGGGTCCCGGCGCA TCCCCTGCCATTCCAAACCTCGCTCGGCATTTGCAATCCTTGAAGCGCGTCCTCGTCGATCGTTGCTGTGGTCGT CGGCGCCTAGGTATTGTTGGGCAGACTGAGCCGCTGGAAATGGCAAGGCAGCTCGTCGAGCAAACAATTCTTGCT GGGCAAGGCAACTCGATGCTATTTATTGGGCCGCGCGGAAGTGGCAAGACGACGGTAAGCATCGACAAGCAGGCA AAGACTGCTTCCTGGCTGATGGATTGCAAAGATGATACAAAGCATCATTGGCCATGTAAGGAGTCAACATGGTGA |
| Transcript | >OphauG2|4807 ATGTCTCCTGGGCGTAAACGACGGCTGGGGCAGCCCCACGCAGATTCACAAAGCCCCGAAGCATCCCCATGCGCC AACAAGCGTCCCCGACTCGACAGCCACGGCGCTGGCCAGAGCCCGTCGACTCCCCGCGCTCTACGCGCTGTGGCA TCGGGTGCTCTGAAGCTGGGCCTGGAGCAGTCCCAAGACACGTCTCTGCGGGCCCCAGCCTCTTCCAAGCCCTCT CGGCCTGCTATCAAGCTTGCAGCTCTCAAGGGAACTAGATGGGACCCTGGAGACATCAAGACGAGTGCTCGGCTG GGCAATTCGACCGCATCTTCACGCCCACCTGGGCAAAAGTCGCTACATGGTCGCTCACGACGGGCAGCCTCGACC CAGCATTTGGATTCCAGCGACAAGCCGGACCATGCTCGTCAAGATTCTCCCCATGAGCTTGCCGCCACCCAAAAT CCGTCCACGCGCAAAACCAAGGCCTTTGCTCGCCACGACTCGCCCGACGAGCTTTCCGCAATGGAAACGCCTTCC AAGCGCACTGCCAAGTCATTGCCGCCCTCTGCCTCCAAGCCCGCAACTCCAAAAGGCATCCTCACCCCCCGCAGA AGGCCGGGGCGCCCCCCCAAAAACGTTAGTTTTGATAGAAAACTCCAGGACGAAATCTTTTTCCAAGACTTGCGC AAACCAGCCAGTGGGAAAGGGAACAGGGCATCCAAATCCAAGAAAAACAAGGCAGACGCCGACGACGGCGACGAT GATGATGATGATGAAATCCGATGCGCCATATGCTTCAAAGCCGACTCGAATCCGCCAAACGAAATTATACTCTGC GACAATTGCGACTACTCTGTACATCAGCTGTGCTACGAGGTTCCCCAAATACCAGAGGGCGACTGGCTGTGTAAA GCGTGTGGCCAACAAGACGTTTTGGAAAGCGCCGAGCCATCTTCTGCCCCCCAGGCTTCCTCGGGTCCCGGCGCA TCCCCTGCCATTCCAAACCTCGCTCGGCATTTGCAATCCTTGAAGCGCGTCCTCGTCGATCGTTGCTGTGGTCGT CGGCGCCTAGGTATTGTTGGGCAGACTGAGCCGCTGGAAATGGCAAGGCAGCTCGTCGAGCAAACAATTCTTGCT GGGCAAGGCAACTCGATGCTATTTATTGGGCCGCGCGGAAGTGGCAAGACGACGGTAAGCATCGACAAGCAGGCA AAGACTGCTTCCTGGCTGATGGATTGCAAAGATGATACAAAGCATCATTGGCCATGTAAGGAGTCAACATGGTGA |
| Gene | >OphauG2|4807 ATGTCTCCTGGGCGTAAACGACGGCTGGGGCAGCCCCACGCAGATTCACAAAGCCCCGAAGCATCCCCATGCGCC AACAAGCGTCCCCGACTCGACAGCCACGGCGCTGGCCAGAGCCCGTCGACTCCCCGCGCTCTACGCGCTGTGGCA TCGGGTGCTCTGAAGCTGGGCCTGGAGCAGTCCCAAGACACGTCTCTGCGGGCCCCAGCCTCTTCCAAGCCCTCT CGGCCTGCTATCAAGCTTGCAGCTCTCAAGGGAACTAGATGGGACCCTGGAGACATCAAGACGAGTGCTCGGCTG GGCAATTCGACCGCATCTTCACGCCCACCTGGGCAAAAGTCGCTACATGGTCGCTCACGACGGGCAGCCTCGACC CAGCATTTGGATTCCAGCGACAAGCCGGACCATGCTCGTCAAGATTCTCCCCATGAGCTTGCCGCCACCCAAAAT CCGTCCACGCGCAAAACCAAGGCCTTTGCTCGCCACGACTCGCCCGACGAGCTTTCCGCAATGGAAACGCCTTCC AAGCGCACTGCCAAGTCATTGCCGCCCTCTGCCTCCAAGCCCGCAACTCCAAAAGGCATCCTCACCCCCCGCAGA AGGCCGGGGCGCCCCCCCAAAAACGTTAGTTTTGATAGAAAACTCCAGGACGAAATCTTTTTCCAAGACTTGCGC AAACCAGCCAGTGGGAAAGGGAACAGGGCATCCAAATCCAAGAAAAACAAGGCAGACGCCGACGACGGCGACGAT GATGATGATGATGAAATCCGATGCGCCATATGCTTCAAAGCCGACTCGAATCCGCCAAACGAAATTATACTCTGC GACAATTGCGACTACTCTGTACATCAGCTGTGCTACGAGGTTCCCCAAATACCAGAGGGCGACTGGCTGTGTAAA GCGTGTGGCCAACAAGACGTTTTGGAAAGCGCCGAGCCATCTTCTGCCCCCCAGGCTTCCTCGGGTCCCGGCGCA TCCCCTGCCATTCCAAACCTCGCTCGGCATTTGCAATCCTTGAAGCGCGTCCTCGTCGATCGTTGCTGTGGTCGT CGGCGCCTAGGTATTGTTGGGCAGACTGAGCCGCTGGAAATGGCAAGGCAGCTCGTCGAGCAAACAATTCTTGCT GGGCAAGGCAACTCGATGCTATTTATTGGGCCGCGCGGAAGTGGCAAGACGACGGTAAGCATCGACAAGCAGGCA AAGACTGCTTCCTGGCTGATGGATTGCAAAGATGATACAAAGCATCATTGGCCATGTAAGGAGTCAACATGGTGA |