Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauG2|4782
Gene name
LocationContig_41:24548..25565
Strand-
Gene length (bp)1017
Transcript length (bp)957
Coding sequence length (bp)957
Protein length (aa) 319

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13668 Ferritin_2 Ferritin-like domain 1.6E-36 46 178

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|P53693|RDS1_SCHPO Protein rds1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rds1 PE=2 SV=2 46 224 6.0E-15

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 19 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauG2|4782
MAWFKTLGVAALAAAATAYPTVRNISPRHAKYIVARQQAADSGLTDPDIFDFALTLEHLQANFYRQGFAKFPDSD
FQSLGLNNQQLADLKVMGKAEEDHEVLIQQTLAGVGIQPVQPCEYDFGFTDAKAMVDMALVLESIGVSAYLGAAP
LVSDKSLLAAAATITTVESRQQSVLRAFTGIEAVPQSFDAPLSPRSIFSMAAPFIKSCPQGSNLMIEPFPALEMK
GGQNPMEMSVGTNVLVAMPANAQASGAPTKCAFTSGGVRPAGTVFTDFSESTGCQVPQTVAGFTYLFLTSNEPAD
GAVTDEIVMAGPMPLKVS*
Coding >OphauG2|4782
ATGGCCTGGTTCAAGACATTGGGCGTCGCGGCTCTGGCTGCCGCTGCCACGGCGTATCCGACAGTGCGCAACATC
AGCCCGCGCCACGCCAAGTATATTGTTGCCCGACAACAGGCGGCCGACTCTGGGCTGACGGATCCAGACATTTTT
GACTTTGCCCTGACGCTGGAGCACCTGCAGGCAAACTTTTACAGACAGGGCTTTGCCAAGTTCCCCGACTCGGAC
TTCCAATCGCTGGGCCTCAACAACCAGCAGCTGGCGGACCTCAAGGTGATGGGCAAGGCCGAGGAGGACCACGAG
GTCTTGATCCAGCAGACGCTGGCGGGCGTGGGCATCCAGCCGGTGCAGCCGTGCGAGTACGACTTTGGCTTCACC
GACGCCAAGGCCATGGTGGACATGGCGCTGGTGCTGGAGAGCATCGGCGTCTCGGCCTACCTGGGCGCGGCGCCC
CTCGTGTCGGACAAGTCGCTGCTGGCGGCCGCGGCCACCATCACCACGGTCGAGTCGCGCCAGCAGAGCGTCCTG
CGCGCCTTTACCGGCATCGAGGCCGTGCCGCAGTCGTTTGACGCGCCTCTCAGCCCGCGCTCCATCTTCTCCATG
GCCGCGCCCTTTATCAAGTCGTGTCCCCAGGGCTCCAACCTCATGATCGAGCCCTTCCCCGCCCTCGAGATGAAG
GGCGGCCAGAACCCCATGGAGATGTCTGTCGGCACAAACGTCCTCGTCGCCATGCCTGCCAATGCCCAGGCGTCG
GGCGCCCCGACAAAGTGCGCCTTTACCTCGGGCGGCGTCCGGCCTGCCGGCACCGTCTTCACCGACTTTTCCGAG
TCCACCGGCTGCCAGGTGCCTCAGACTGTTGCCGGCTTCACCTATCTCTTCCTCACCAGCAACGAGCCCGCCGAC
GGCGCCGTCACCGACGAGATTGTCATGGCCGGCCCCATGCCCCTCAAGGTCTCATAA
Transcript >OphauG2|4782
ATGGCCTGGTTCAAGACATTGGGCGTCGCGGCTCTGGCTGCCGCTGCCACGGCGTATCCGACAGTGCGCAACATC
AGCCCGCGCCACGCCAAGTATATTGTTGCCCGACAACAGGCGGCCGACTCTGGGCTGACGGATCCAGACATTTTT
GACTTTGCCCTGACGCTGGAGCACCTGCAGGCAAACTTTTACAGACAGGGCTTTGCCAAGTTCCCCGACTCGGAC
TTCCAATCGCTGGGCCTCAACAACCAGCAGCTGGCGGACCTCAAGGTGATGGGCAAGGCCGAGGAGGACCACGAG
GTCTTGATCCAGCAGACGCTGGCGGGCGTGGGCATCCAGCCGGTGCAGCCGTGCGAGTACGACTTTGGCTTCACC
GACGCCAAGGCCATGGTGGACATGGCGCTGGTGCTGGAGAGCATCGGCGTCTCGGCCTACCTGGGCGCGGCGCCC
CTCGTGTCGGACAAGTCGCTGCTGGCGGCCGCGGCCACCATCACCACGGTCGAGTCGCGCCAGCAGAGCGTCCTG
CGCGCCTTTACCGGCATCGAGGCCGTGCCGCAGTCGTTTGACGCGCCTCTCAGCCCGCGCTCCATCTTCTCCATG
GCCGCGCCCTTTATCAAGTCGTGTCCCCAGGGCTCCAACCTCATGATCGAGCCCTTCCCCGCCCTCGAGATGAAG
GGCGGCCAGAACCCCATGGAGATGTCTGTCGGCACAAACGTCCTCGTCGCCATGCCTGCCAATGCCCAGGCGTCG
GGCGCCCCGACAAAGTGCGCCTTTACCTCGGGCGGCGTCCGGCCTGCCGGCACCGTCTTCACCGACTTTTCCGAG
TCCACCGGCTGCCAGGTGCCTCAGACTGTTGCCGGCTTCACCTATCTCTTCCTCACCAGCAACGAGCCCGCCGAC
GGCGCCGTCACCGACGAGATTGTCATGGCCGGCCCCATGCCCCTCAAGGTCTCATAA
Gene >OphauG2|4782
ATGGCCTGGTTCAAGACATTGGGCGTCGCGGCTCTGGCTGCCGCTGCCACGGCGTATCCGACAGTGCGCAACATC
AGCCCGCGCCACGCCAAGTATATTGTTGCCCGACAACAGGCGGCCGACTCTGGGCTGACGGATCCAGACATTTTT
GACTTGTGAGGCTTCTCCATCCACCACACAGAATAATGGCAGGACAATGGCTGACAAGACCACAGTGCCCTGACG
CTGGAGCACCTGCAGGCAAACTTTTACAGACAGGGCTTTGCCAAGTTCCCCGACTCGGACTTCCAATCGCTGGGC
CTCAACAACCAGCAGCTGGCGGACCTCAAGGTGATGGGCAAGGCCGAGGAGGACCACGAGGTCTTGATCCAGCAG
ACGCTGGCGGGCGTGGGCATCCAGCCGGTGCAGCCGTGCGAGTACGACTTTGGCTTCACCGACGCCAAGGCCATG
GTGGACATGGCGCTGGTGCTGGAGAGCATCGGCGTCTCGGCCTACCTGGGCGCGGCGCCCCTCGTGTCGGACAAG
TCGCTGCTGGCGGCCGCGGCCACCATCACCACGGTCGAGTCGCGCCAGCAGAGCGTCCTGCGCGCCTTTACCGGC
ATCGAGGCCGTGCCGCAGTCGTTTGACGCGCCTCTCAGCCCGCGCTCCATCTTCTCCATGGCCGCGCCCTTTATC
AAGTCGTGTCCCCAGGGCTCCAACCTCATGATCGAGCCCTTCCCCGCCCTCGAGATGAAGGGCGGCCAGAACCCC
ATGGAGATGTCTGTCGGCACAAACGTCCTCGTCGCCATGCCTGCCAATGCCCAGGCGTCGGGCGCCCCGACAAAG
TGCGCCTTTACCTCGGGCGGCGTCCGGCCTGCCGGCACCGTCTTCACCGACTTTTCCGAGTCCACCGGCTGCCAG
GTGCCTCAGACTGTTGCCGGCTTCACCTATCTCTTCCTCACCAGCAACGAGCCCGCCGACGGCGCCGTCACCGAC
GAGATTGTCATGGCCGGCCCCATGCCCCTCAAGGTCTCATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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