Fungal Genomics

at Utrecht University

General Properties

Protein ID	OphauG2\|4782
Gene name
Location	Contig_41:24548..25565
Strand	-
Gene length (bp)	1017
Transcript length (bp)	957
Coding sequence length (bp)	957
Protein length (aa)	319

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF13668	Ferritin_2	Ferritin-like domain	1.6E-36	46	178

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|P53693\|RDS1_SCHPO	Protein rds1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rds1 PE=2 SV=2	46	224	6.0E-15

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
Yes	1 - 19	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>OphauG2\|4782 MAWFKTLGVAALAAAATAYPTVRNISPRHAKYIVARQQAADSGLTDPDIFDFALTLEHLQANFYRQGFAKFPDSD FQSLGLNNQQLADLKVMGKAEEDHEVLIQQTLAGVGIQPVQPCEYDFGFTDAKAMVDMALVLESIGVSAYLGAAP LVSDKSLLAAAATITTVESRQQSVLRAFTGIEAVPQSFDAPLSPRSIFSMAAPFIKSCPQGSNLMIEPFPALEMK GGQNPMEMSVGTNVLVAMPANAQASGAPTKCAFTSGGVRPAGTVFTDFSESTGCQVPQTVAGFTYLFLTSNEPAD GAVTDEIVMAGPMPLKVS*
Coding	>OphauG2\|4782 ATGGCCTGGTTCAAGACATTGGGCGTCGCGGCTCTGGCTGCCGCTGCCACGGCGTATCCGACAGTGCGCAACATC AGCCCGCGCCACGCCAAGTATATTGTTGCCCGACAACAGGCGGCCGACTCTGGGCTGACGGATCCAGACATTTTT GACTTTGCCCTGACGCTGGAGCACCTGCAGGCAAACTTTTACAGACAGGGCTTTGCCAAGTTCCCCGACTCGGAC TTCCAATCGCTGGGCCTCAACAACCAGCAGCTGGCGGACCTCAAGGTGATGGGCAAGGCCGAGGAGGACCACGAG GTCTTGATCCAGCAGACGCTGGCGGGCGTGGGCATCCAGCCGGTGCAGCCGTGCGAGTACGACTTTGGCTTCACC GACGCCAAGGCCATGGTGGACATGGCGCTGGTGCTGGAGAGCATCGGCGTCTCGGCCTACCTGGGCGCGGCGCCC CTCGTGTCGGACAAGTCGCTGCTGGCGGCCGCGGCCACCATCACCACGGTCGAGTCGCGCCAGCAGAGCGTCCTG CGCGCCTTTACCGGCATCGAGGCCGTGCCGCAGTCGTTTGACGCGCCTCTCAGCCCGCGCTCCATCTTCTCCATG GCCGCGCCCTTTATCAAGTCGTGTCCCCAGGGCTCCAACCTCATGATCGAGCCCTTCCCCGCCCTCGAGATGAAG GGCGGCCAGAACCCCATGGAGATGTCTGTCGGCACAAACGTCCTCGTCGCCATGCCTGCCAATGCCCAGGCGTCG GGCGCCCCGACAAAGTGCGCCTTTACCTCGGGCGGCGTCCGGCCTGCCGGCACCGTCTTCACCGACTTTTCCGAG TCCACCGGCTGCCAGGTGCCTCAGACTGTTGCCGGCTTCACCTATCTCTTCCTCACCAGCAACGAGCCCGCCGAC GGCGCCGTCACCGACGAGATTGTCATGGCCGGCCCCATGCCCCTCAAGGTCTCATAA
Transcript	>OphauG2\|4782 ATGGCCTGGTTCAAGACATTGGGCGTCGCGGCTCTGGCTGCCGCTGCCACGGCGTATCCGACAGTGCGCAACATC AGCCCGCGCCACGCCAAGTATATTGTTGCCCGACAACAGGCGGCCGACTCTGGGCTGACGGATCCAGACATTTTT GACTTTGCCCTGACGCTGGAGCACCTGCAGGCAAACTTTTACAGACAGGGCTTTGCCAAGTTCCCCGACTCGGAC TTCCAATCGCTGGGCCTCAACAACCAGCAGCTGGCGGACCTCAAGGTGATGGGCAAGGCCGAGGAGGACCACGAG GTCTTGATCCAGCAGACGCTGGCGGGCGTGGGCATCCAGCCGGTGCAGCCGTGCGAGTACGACTTTGGCTTCACC GACGCCAAGGCCATGGTGGACATGGCGCTGGTGCTGGAGAGCATCGGCGTCTCGGCCTACCTGGGCGCGGCGCCC CTCGTGTCGGACAAGTCGCTGCTGGCGGCCGCGGCCACCATCACCACGGTCGAGTCGCGCCAGCAGAGCGTCCTG CGCGCCTTTACCGGCATCGAGGCCGTGCCGCAGTCGTTTGACGCGCCTCTCAGCCCGCGCTCCATCTTCTCCATG GCCGCGCCCTTTATCAAGTCGTGTCCCCAGGGCTCCAACCTCATGATCGAGCCCTTCCCCGCCCTCGAGATGAAG GGCGGCCAGAACCCCATGGAGATGTCTGTCGGCACAAACGTCCTCGTCGCCATGCCTGCCAATGCCCAGGCGTCG GGCGCCCCGACAAAGTGCGCCTTTACCTCGGGCGGCGTCCGGCCTGCCGGCACCGTCTTCACCGACTTTTCCGAG TCCACCGGCTGCCAGGTGCCTCAGACTGTTGCCGGCTTCACCTATCTCTTCCTCACCAGCAACGAGCCCGCCGAC GGCGCCGTCACCGACGAGATTGTCATGGCCGGCCCCATGCCCCTCAAGGTCTCATAA
Gene	>OphauG2\|4782 ATGGCCTGGTTCAAGACATTGGGCGTCGCGGCTCTGGCTGCCGCTGCCACGGCGTATCCGACAGTGCGCAACATC AGCCCGCGCCACGCCAAGTATATTGTTGCCCGACAACAGGCGGCCGACTCTGGGCTGACGGATCCAGACATTTTT GACTTGTGAGGCTTCTCCATCCACCACACAGAATAATGGCAGGACAATGGCTGACAAGACCACAGTGCCCTGACG CTGGAGCACCTGCAGGCAAACTTTTACAGACAGGGCTTTGCCAAGTTCCCCGACTCGGACTTCCAATCGCTGGGC CTCAACAACCAGCAGCTGGCGGACCTCAAGGTGATGGGCAAGGCCGAGGAGGACCACGAGGTCTTGATCCAGCAG ACGCTGGCGGGCGTGGGCATCCAGCCGGTGCAGCCGTGCGAGTACGACTTTGGCTTCACCGACGCCAAGGCCATG GTGGACATGGCGCTGGTGCTGGAGAGCATCGGCGTCTCGGCCTACCTGGGCGCGGCGCCCCTCGTGTCGGACAAG TCGCTGCTGGCGGCCGCGGCCACCATCACCACGGTCGAGTCGCGCCAGCAGAGCGTCCTGCGCGCCTTTACCGGC ATCGAGGCCGTGCCGCAGTCGTTTGACGCGCCTCTCAGCCCGCGCTCCATCTTCTCCATGGCCGCGCCCTTTATC AAGTCGTGTCCCCAGGGCTCCAACCTCATGATCGAGCCCTTCCCCGCCCTCGAGATGAAGGGCGGCCAGAACCCC ATGGAGATGTCTGTCGGCACAAACGTCCTCGTCGCCATGCCTGCCAATGCCCAGGCGTCGGGCGCCCCGACAAAG TGCGCCTTTACCTCGGGCGGCGTCCGGCCTGCCGGCACCGTCTTCACCGACTTTTCCGAGTCCACCGGCTGCCAG GTGCCTCAGACTGTTGCCGGCTTCACCTATCTCTTCCTCACCAGCAACGAGCCCGCCGACGGCGCCGTCACCGAC GAGATTGTCATGGCCGGCCCCATGCCCCTCAAGGTCTCATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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