© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | OphauG2|4744 |
| Gene name | |
| Location | Contig_406:147..2149 |
| Strand | + |
| Gene length (bp) | 2002 |
| Transcript length (bp) | 1734 |
| Coding sequence length (bp) | 1734 |
| Protein length (aa) | 578 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF04082 | Fungal_trans | Fungal specific transcription factor domain | 8.2E-14 | 103 | 360 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|A1DIC0|XLNR_NEOFI | Xylanolytic transcriptional activator xlnR OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=xlnR PE=3 SV=2 | 46 | 577 | 6.0E-101 |
| sp|Q5AVS0|XLNR_EMENI | Xylanolytic transcriptional activator xlnR OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=xlnR PE=2 SV=2 | 46 | 577 | 2.0E-99 |
| sp|B0XUL1|XLNR_ASPFC | Xylanolytic transcriptional activator xlnR OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) GN=xlnR PE=3 SV=1 | 46 | 577 | 4.0E-99 |
| sp|Q4WZV6|XLNR_ASPFU | Xylanolytic transcriptional activator xlnR OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=xlnR PE=3 SV=1 | 46 | 577 | 4.0E-99 |
| sp|Q2UD93|XLNR_ASPOR | Xylanolytic transcriptional activator xlnR OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=xlnR PE=1 SV=2 | 46 | 577 | 3.0E-97 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|A1DIC0|XLNR_NEOFI | Xylanolytic transcriptional activator xlnR OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=xlnR PE=3 SV=2 | 46 | 577 | 6.0E-101 |
| sp|Q5AVS0|XLNR_EMENI | Xylanolytic transcriptional activator xlnR OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=xlnR PE=2 SV=2 | 46 | 577 | 2.0E-99 |
| sp|B0XUL1|XLNR_ASPFC | Xylanolytic transcriptional activator xlnR OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) GN=xlnR PE=3 SV=1 | 46 | 577 | 4.0E-99 |
| sp|Q4WZV6|XLNR_ASPFU | Xylanolytic transcriptional activator xlnR OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=xlnR PE=3 SV=1 | 46 | 577 | 4.0E-99 |
| sp|Q2UD93|XLNR_ASPOR | Xylanolytic transcriptional activator xlnR OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=xlnR PE=1 SV=2 | 46 | 577 | 3.0E-97 |
| sp|B8N6M6|XLNR_ASPFN | Xylanolytic transcriptional activator xlnR OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC 167) GN=xlnR PE=3 SV=1 | 46 | 577 | 3.0E-97 |
| sp|Q0CV52|XLNR_ASPTN | Xylanolytic transcriptional activator xlnR OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=xlnR PE=3 SV=2 | 46 | 577 | 3.0E-95 |
| sp|O42804|XLNR_ASPNG | Xylanolytic transcriptional activator xlnR OS=Aspergillus niger GN=xlnR PE=1 SV=2 | 46 | 577 | 2.0E-93 |
| sp|A2R5W7|XLNR_ASPNC | Xylanolytic transcriptional activator xlnR OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=xlnR PE=3 SV=2 | 46 | 577 | 2.0E-93 |
| sp|Q96WP8|XLNR_ASPKA | Xylanolytic transcriptional activator xlnR OS=Aspergillus kawachii GN=xlnR PE=3 SV=2 | 46 | 577 | 1.0E-92 |
| sp|A1C7P9|XLNR_ASPCL | Xylanolytic transcriptional activator xlnR OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) GN=xlnR PE=3 SV=2 | 46 | 577 | 7.0E-92 |
| sp|A2QJX5|ARAR_ASPNC | Arabinanolytic transcriptional activator araR OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=araR PE=3 SV=1 | 46 | 577 | 3.0E-74 |
| sp|Q5BGE2|ARAR_EMENI | Arabinolytic transcriptional activator araR OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=AN0388 PE=3 SV=1 | 41 | 577 | 1.0E-70 |
| sp|G4MZJ4|XLNR_MAGO7 | Xylanolytic transcriptional activator xlnR homolog OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN=xlr1 PE=3 SV=1 | 42 | 386 | 8.0E-51 |
| sp|G4MZJ4|XLNR_MAGO7 | Xylanolytic transcriptional activator xlnR homolog OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN=xlr1 PE=3 SV=1 | 409 | 577 | 3.0E-42 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0003677 | DNA binding | Yes |
| GO:0006351 | transcription, DNA-templated | Yes |
| GO:0008270 | zinc ion binding | Yes |
| GO:0009987 | cellular process | No |
| GO:0043170 | macromolecule metabolic process | No |
| GO:0046483 | heterocycle metabolic process | No |
| GO:0009059 | macromolecule biosynthetic process | No |
| GO:1901576 | organic substance biosynthetic process | No |
| GO:0018130 | heterocycle biosynthetic process | No |
| GO:0009058 | biosynthetic process | No |
| GO:0008152 | metabolic process | No |
| GO:0008150 | biological_process | No |
| GO:0044238 | primary metabolic process | No |
| GO:1901363 | heterocyclic compound binding | No |
| GO:0046872 | metal ion binding | No |
| GO:0003676 | nucleic acid binding | No |
| GO:0034654 | nucleobase-containing compound biosynthetic process | No |
| GO:0043167 | ion binding | No |
| GO:1901362 | organic cyclic compound biosynthetic process | No |
| GO:0032774 | RNA biosynthetic process | No |
| GO:0003674 | molecular_function | No |
| GO:0034641 | cellular nitrogen compound metabolic process | No |
| GO:0097659 | nucleic acid-templated transcription | No |
| GO:0006725 | cellular aromatic compound metabolic process | No |
| GO:0016070 | RNA metabolic process | No |
| GO:0043169 | cation binding | No |
| GO:0044237 | cellular metabolic process | No |
| GO:0006139 | nucleobase-containing compound metabolic process | No |
| GO:0097159 | organic cyclic compound binding | No |
| GO:1901360 | organic cyclic compound metabolic process | No |
| GO:0090304 | nucleic acid metabolic process | No |
| GO:0046914 | transition metal ion binding | No |
| GO:0044249 | cellular biosynthetic process | No |
| GO:0044271 | cellular nitrogen compound biosynthetic process | No |
| GO:0019438 | aromatic compound biosynthetic process | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0005488 | binding | No |
| GO:0006807 | nitrogen compound metabolic process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 11 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 474 | 496 | 22 |
| Transcription Factor Class (based on PFAM domains) |
|---|
| Fungal Specific TF |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauG2|4744 MRRRRTSFRSAASNERNVRASVSTPTTAADFAADASLRAPTQDCHYRFLDPVLPFIRRIIPASVACELLDIFLTD PGSSLFRGASPYILTRVFRKRSITHPSSPRYTTPALLATILWCVAQTADVMLLHVPGTRARVVNDLYDLATSLVS ERDPDRWRRIHGGLRAESEVPHPSFSKPAVPTTTAANEPAGLVDDVLTFILLSIAVSGGDFKSDCYKWWSKAVRL AMALRLNREDERCSASVSPCANPLCSCHADTKDASLVQFERREERRRVFWLLYSLDRHLSLSFNTVLSMPDSYCE VFAPLPEVVWESLDVIAPKDLPARILGPPTLATGTGFFEYFLPLMAILGDIIEVHHRRRHPRLGGQNNAHSVAIV KELLASYELSLASLNSSNYPYGPHGPAGPADHSRVRLVRAYSAHILHVLHVLLHGKWDAISMLDDGDDWITSPRF TECAAHAISASQTVSTILTIDPELTFMSYLFGIYLLQGSFILLLFADRMPQLGPNESVEQACENIIRAHEVCVVT LSTEFQKNFRKVVRSTLYSVRGSGTTNWDEHRARRRALSLYRWTKGARGLAL* |
| Coding | >OphauG2|4744 ATGAGGCGGCGACGGACTTCGTTTCGGTCGGCGGCGAGCAACGAGCGCAATGTGCGGGCTTCCGTCAGTACGCCG ACAACGGCGGCCGACTTTGCGGCGGATGCGTCGCTGCGCGCGCCGACCCAAGACTGCCACTATCGCTTCCTGGAT CCCGTGCTGCCCTTTATCCGGCGCATTATCCCGGCCTCGGTGGCGTGCGAGCTGCTCGACATCTTTCTCACTGAC CCTGGCAGCTCCTTGTTCCGCGGCGCGTCGCCGTATATCCTGACGCGCGTCTTTCGCAAGCGCTCCATTACGCAT CCGTCCAGCCCGCGCTACACCACGCCGGCGCTGCTGGCCACTATCCTGTGGTGTGTTGCGCAGACGGCCGACGTG ATGCTGCTTCACGTGCCGGGCACCAGGGCGCGAGTGGTCAACGACCTGTACGACTTGGCCACGTCGCTTGTGTCG GAGCGTGATCCCGACCGCTGGCGGCGCATCCACGGCGGGTTGCGCGCCGAGAGCGAGGTGCCGCACCCGAGCTTC TCCAAGCCAGCAGTGCCGACGACAACGGCCGCCAATGAACCGGCGGGCCTGGTGGATGACGTGCTCACCTTTATC CTGCTGTCCATTGCCGTCTCTGGAGGCGACTTCAAGTCGGACTGCTACAAATGGTGGTCCAAGGCTGTGCGCTTG GCCATGGCGCTGCGCCTCAACCGCGAGGACGAACGCTGCTCGGCGTCTGTGTCGCCCTGCGCAAACCCGCTGTGC TCGTGCCATGCCGATACCAAGGATGCCAGCCTGGTGCAGTTTGAGCGCCGCGAGGAGCGCCGGCGAGTCTTTTGG TTGCTGTACAGCCTGGACCGACACTTGAGCCTTTCTTTTAACACTGTTTTGTCCATGCCCGACTCTTACTGCGAA GTGTTTGCCCCCTTGCCCGAGGTTGTATGGGAAAGCCTCGATGTCATTGCCCCCAAGGACCTGCCCGCACGCATC TTGGGCCCGCCGACGCTGGCCACCGGCACCGGCTTCTTCGAGTACTTCTTGCCCCTCATGGCCATTCTCGGCGAC ATCATCGAGGTGCACCACCGGCGACGGCATCCACGGCTCGGCGGGCAAAACAATGCCCACTCGGTGGCCATTGTC AAGGAGCTGCTGGCCAGCTATGAGCTCAGTCTCGCGTCACTCAACAGCTCAAACTATCCCTACGGCCCTCACGGC CCTGCCGGCCCTGCAGACCATTCGCGGGTGCGGCTGGTGCGAGCGTACAGCGCTCACATTCTCCATGTGCTCCAC GTCTTGCTCCATGGCAAGTGGGACGCCATTTCCATGCTCGACGACGGCGACGACTGGATCACGTCGCCGCGCTTT ACCGAGTGTGCGGCCCATGCCATTTCCGCGTCGCAGACCGTGTCCACCATTCTCACCATTGATCCCGAGTTGACT TTTATGTCGTATCTGTTTGGCATATATCTGCTGCAGGGCAGTTTTATCCTGCTTTTGTTTGCAGACCGCATGCCG CAGCTGGGGCCAAACGAGTCGGTGGAGCAGGCTTGTGAAAACATTATCCGGGCCCACGAAGTTTGCGTCGTGACT CTGAGCACCGAGTTTCAGAAAAACTTTCGCAAAGTGGTGCGGTCGACGCTCTATAGTGTACGGGGCTCGGGCACG ACGAATTGGGACGAGCATCGCGCAAGGCGACGCGCTCTGTCTCTCTACAGGTGGACCAAAGGTGCTCGAGGGCTG GCATTGTAA |
| Transcript | >OphauG2|4744 ATGAGGCGGCGACGGACTTCGTTTCGGTCGGCGGCGAGCAACGAGCGCAATGTGCGGGCTTCCGTCAGTACGCCG ACAACGGCGGCCGACTTTGCGGCGGATGCGTCGCTGCGCGCGCCGACCCAAGACTGCCACTATCGCTTCCTGGAT CCCGTGCTGCCCTTTATCCGGCGCATTATCCCGGCCTCGGTGGCGTGCGAGCTGCTCGACATCTTTCTCACTGAC CCTGGCAGCTCCTTGTTCCGCGGCGCGTCGCCGTATATCCTGACGCGCGTCTTTCGCAAGCGCTCCATTACGCAT CCGTCCAGCCCGCGCTACACCACGCCGGCGCTGCTGGCCACTATCCTGTGGTGTGTTGCGCAGACGGCCGACGTG ATGCTGCTTCACGTGCCGGGCACCAGGGCGCGAGTGGTCAACGACCTGTACGACTTGGCCACGTCGCTTGTGTCG GAGCGTGATCCCGACCGCTGGCGGCGCATCCACGGCGGGTTGCGCGCCGAGAGCGAGGTGCCGCACCCGAGCTTC TCCAAGCCAGCAGTGCCGACGACAACGGCCGCCAATGAACCGGCGGGCCTGGTGGATGACGTGCTCACCTTTATC CTGCTGTCCATTGCCGTCTCTGGAGGCGACTTCAAGTCGGACTGCTACAAATGGTGGTCCAAGGCTGTGCGCTTG GCCATGGCGCTGCGCCTCAACCGCGAGGACGAACGCTGCTCGGCGTCTGTGTCGCCCTGCGCAAACCCGCTGTGC TCGTGCCATGCCGATACCAAGGATGCCAGCCTGGTGCAGTTTGAGCGCCGCGAGGAGCGCCGGCGAGTCTTTTGG TTGCTGTACAGCCTGGACCGACACTTGAGCCTTTCTTTTAACACTGTTTTGTCCATGCCCGACTCTTACTGCGAA GTGTTTGCCCCCTTGCCCGAGGTTGTATGGGAAAGCCTCGATGTCATTGCCCCCAAGGACCTGCCCGCACGCATC TTGGGCCCGCCGACGCTGGCCACCGGCACCGGCTTCTTCGAGTACTTCTTGCCCCTCATGGCCATTCTCGGCGAC ATCATCGAGGTGCACCACCGGCGACGGCATCCACGGCTCGGCGGGCAAAACAATGCCCACTCGGTGGCCATTGTC AAGGAGCTGCTGGCCAGCTATGAGCTCAGTCTCGCGTCACTCAACAGCTCAAACTATCCCTACGGCCCTCACGGC CCTGCCGGCCCTGCAGACCATTCGCGGGTGCGGCTGGTGCGAGCGTACAGCGCTCACATTCTCCATGTGCTCCAC GTCTTGCTCCATGGCAAGTGGGACGCCATTTCCATGCTCGACGACGGCGACGACTGGATCACGTCGCCGCGCTTT ACCGAGTGTGCGGCCCATGCCATTTCCGCGTCGCAGACCGTGTCCACCATTCTCACCATTGATCCCGAGTTGACT TTTATGTCGTATCTGTTTGGCATATATCTGCTGCAGGGCAGTTTTATCCTGCTTTTGTTTGCAGACCGCATGCCG CAGCTGGGGCCAAACGAGTCGGTGGAGCAGGCTTGTGAAAACATTATCCGGGCCCACGAAGTTTGCGTCGTGACT CTGAGCACCGAGTTTCAGAAAAACTTTCGCAAAGTGGTGCGGTCGACGCTCTATAGTGTACGGGGCTCGGGCACG ACGAATTGGGACGAGCATCGCGCAAGGCGACGCGCTCTGTCTCTCTACAGGTGGACCAAAGGTGCTCGAGGGCTG GCATTGTAA |
| Gene | >OphauG2|4744 ATGAGGCGGCGACGGACTTCGTTTCGGTCGGCGGCGAGCAACGAGCGCAATGTGCGGGCTTCCGTCAGTACGCCG ACAACGGCGGCCGACTTTGCGGCGGATGCGTCGCTGCGCGCGCCGACCCAAGACTGCCACTATCGCTTCCTGGAT CCCGTGCTGCCCTTTATCCGGCGCATTATCCCGGCCTCGGTGGCGTGCGAGCTGCTCGACATCTTTCTCACTGAC CCTGGCAGCTCCTTGTTCCGCGGCGCGTCGCCGTATATCCTGACGCGCGTCTTTCGCAAGCGCTCCATTACGCAT CCGTCCAGCCCGCGCTACACCACGCCGGCGCTGCTGGCCACTATCCTGTGGTGTGTTGCGCAGACGGCCGACGTG ATGCTGCTTCACGTGCCGGGCACCAGGGCGCGAGTGGTCAACGACCTGTACGACTTGGCCACGTCGCTTGTGTCG GAGCGTGATCCCGACCGCTGGCGGCGCATCCACGGCGGGTTGCGCGCCGAGAGCGAGGTGCCGCACCCGAGCTTC TCCAAGCCAGCAGTGCCGACGACAACGGCCGCCAATGAACCGGCGGGCCTGGTGGATGACGTGCTCACCTTTATC CTGCTGTCCATTGCCGTCTCTGGAGGCGACTTCAAGTCGGACTGCTACAAATGGTGGTCCAAGGCTGTGCGCTTG GCCATGGCGCTGCGCCTCAACCGCGAGGACGAACGCTGCTCGGCGTCTGTGTCGCCCTGCGCAAACCCGCTGTGC TCGTGCCATGCCGATACCAAGGATGCCAGCCTGGTGCAGTTTGAGCGCCGCGAGGAGCGCCGGCGAGTCTTTTGG TTGCTGTACAGCCTGGACCGACACTTGAGCCTTTCTTTTAACACTGTTTTGTCCATGCCCGACTCTTACTGCGAA GTGTTTGGTGAGTCTTGTGGTTTGCCCAGTCTTGGATTTGCCGAGTCGTGGATCTGCTCTCAAGCCTCTTGGCTG CCCCAAATATCAAAAGACTAACCAACCTCAGCCCCCTTGCCCGAGGTTGTATGGGAAAGCCTCGATGTCATTGCC CCCAAGGACCTGCCCGCACGCATCTTGGGCCCGCCGACGCTGGCCACCGGCACCGGCTTCTTCGAGTACTTCTTG CCCCTCATGGCCATTCTCGGCGACATCATCGAGGTGCACCACCGGCGACGGCATCCACGGCTCGGCGGGCAAAAC AATGCCCACTCGGTGGCCATTGTCAAGGAGCTGCTGGCCAGCTATGAGCTCAGTCTCGCGTCACTCAACAGCTCA AACTATCCCTACGGCCCTCACGGCCCTGCCGGCCCTGCAGACCATTCGCGGGTGCGGCTGGTGCGAGCGTACAGC GCTCACATTCTCCATGTGCTCCACGTCTTGCTCCATGGCAAGTGGGACGCCATTTCCATGCTCGACGACGGCGAC GACTGGATCACGTCGCCGCGCTTTACCGAGTGTGCGGCCCATGCCATTTCCGCGTCGCAGACCGTGTCCACCATT CTCACCATTGATCCCGAGTTGACTTTTATGTCGTATCTGTTTGGCATATATCTGCTGCAGGGCAGTTTTATCCTG CTTTTGTTTGCAGACCGCATGCCGCAGCTGGGGCCAAACGAGTCGGTGGAGCAGGCTTGTGAAAACATTATCCGG GCCCACGAAGTTTGCGTCGTGACTCTGAGCACCGAGTTTCAGGCAAGTCTTTTTTTTTTTTTGGCTCCTTTTTGG CTCTATTTTTTTCTTAATTTTTTCTTTTTTTTTTCGCCGGGCTTTGGTTTTTAGTCTTTTCATCTTGGCCTGTTT AAGCTTTCTTCTTCATTACGTTCGTCTCAAACTTAAATGCTGGCTGACGGCGTGTGTGTAGAAAAACTTTCGCAA AGTGGTGCGGTCGACGCTCTATAGTGTACGGGGCTCGGGCACGACGAATTGGGACGAGCATCGCGCAAGGCGACG CGCTCTGTCTCTCTACAGGTGGACCAAAGGTGCTCGAGGGCTGGCATTGTAA |