© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauG2|4742 |
| Gene name | |
| Location | Contig_405:13149..14106 |
| Strand | + |
| Gene length (bp) | 957 |
| Transcript length (bp) | 957 |
| Coding sequence length (bp) | 957 |
| Protein length (aa) | 319 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00173 | Cyt-b5 | Cytochrome b5-like Heme/Steroid binding domain | 7.5E-16 | 230 | 299 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q3TDX8|NB5R4_MOUSE | Cytochrome b5 reductase 4 OS=Mus musculus GN=Cyb5r4 PE=2 SV=3 | 150 | 299 | 9.0E-30 |
| sp|Q28CZ9|NB5R4_XENTR | Cytochrome b5 reductase 4 OS=Xenopus tropicalis GN=cyb5r4 PE=2 SV=1 | 150 | 299 | 2.0E-29 |
| sp|Q7L1T6|NB5R4_HUMAN | Cytochrome b5 reductase 4 OS=Homo sapiens GN=CYB5R4 PE=1 SV=1 | 193 | 299 | 2.0E-29 |
| sp|Q32LH7|NB5R4_BOVIN | Cytochrome b5 reductase 4 OS=Bos taurus GN=CYB5R4 PE=2 SV=1 | 193 | 299 | 2.0E-29 |
| sp|Q502I6|NB5R4_DANRE | Cytochrome b5 reductase 4 OS=Danio rerio GN=cyb5r4 PE=2 SV=1 | 183 | 305 | 5.0E-29 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q3TDX8|NB5R4_MOUSE | Cytochrome b5 reductase 4 OS=Mus musculus GN=Cyb5r4 PE=2 SV=3 | 150 | 299 | 9.0E-30 |
| sp|Q28CZ9|NB5R4_XENTR | Cytochrome b5 reductase 4 OS=Xenopus tropicalis GN=cyb5r4 PE=2 SV=1 | 150 | 299 | 2.0E-29 |
| sp|Q7L1T6|NB5R4_HUMAN | Cytochrome b5 reductase 4 OS=Homo sapiens GN=CYB5R4 PE=1 SV=1 | 193 | 299 | 2.0E-29 |
| sp|Q32LH7|NB5R4_BOVIN | Cytochrome b5 reductase 4 OS=Bos taurus GN=CYB5R4 PE=2 SV=1 | 193 | 299 | 2.0E-29 |
| sp|Q502I6|NB5R4_DANRE | Cytochrome b5 reductase 4 OS=Danio rerio GN=cyb5r4 PE=2 SV=1 | 183 | 305 | 5.0E-29 |
| sp|Q68EJ0|NB5R4_RAT | Cytochrome b5 reductase 4 OS=Rattus norvegicus GN=Cyb5r4 PE=1 SV=2 | 193 | 299 | 7.0E-29 |
| sp|Q9LXD1|RLF_ARATH | Cytochrome b5 domain-containing protein RLF OS=Arabidopsis thaliana GN=RLF PE=2 SV=1 | 182 | 303 | 4.0E-27 |
| sp|Q10352|YDAA_SCHPO | Uncharacterized protein C1F12.10c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1F12.10c PE=3 SV=1 | 187 | 302 | 7.0E-18 |
| sp|Q04772|IRC21_YEAST | Increased recombination centers protein 21 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=IRC21 PE=1 SV=1 | 225 | 303 | 6.0E-13 |
| sp|O74875|YJ83_SCHPO | Uncharacterized heme-binding protein C330.03c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC330.03c PE=1 SV=1 | 198 | 302 | 2.0E-11 |
| sp|O94391|CYB51_SCHPO | Probable cytochrome b5 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC29A10.16c PE=3 SV=1 | 229 | 299 | 3.0E-09 |
| sp|P09437|CYB2_WICAO | Cytochrome b2, mitochondrial OS=Wickerhamomyces anomalus GN=CYB2 PE=1 SV=2 | 225 | 285 | 1.0E-07 |
| sp|Q42342|CYB5E_ARATH | Cytochrome b5 isoform E OS=Arabidopsis thaliana GN=CYTB5-E PE=1 SV=2 | 232 | 299 | 2.0E-07 |
| sp|Q874I5|CYB5_CANTR | Cytochrome b5 OS=Candida tropicalis GN=Cytb5 PE=3 SV=1 | 242 | 283 | 3.0E-07 |
| sp|O04354|CYB5_BOROF | Cytochrome b5 OS=Borago officinalis PE=2 SV=1 | 232 | 299 | 3.0E-07 |
| sp|P49100|CYB5_ORYSJ | Cytochrome b5 OS=Oryza sativa subsp. japonica GN=Os05g0108800 PE=2 SV=2 | 232 | 299 | 8.0E-07 |
| sp|P49098|CYB5_TOBAC | Cytochrome b5 OS=Nicotiana tabacum PE=2 SV=1 | 232 | 299 | 8.0E-07 |
| sp|P40934|CYB5_BRAOB | Cytochrome b5 OS=Brassica oleracea var. botrytis GN=CYB5 PE=1 SV=1 | 232 | 283 | 1.0E-06 |
| sp|O48845|CYB5B_ARATH | Cytochrome b5 isoform B OS=Arabidopsis thaliana GN=CYTB5-B PE=1 SV=1 | 230 | 299 | 2.0E-06 |
| sp|P49099|CYB5S_TOBAC | Cytochrome b5, seed isoform OS=Nicotiana tabacum PE=2 SV=1 | 232 | 299 | 2.0E-06 |
| sp|Q9CQX2|CYB5B_MOUSE | Cytochrome b5 type B OS=Mus musculus GN=Cyb5b PE=1 SV=1 | 209 | 283 | 3.0E-06 |
| sp|O96099|FAD5B_DICDI | Acyl-lipid (8-3)-desaturase B OS=Dictyostelium discoideum GN=fadB PE=1 SV=1 | 234 | 285 | 5.0E-06 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 17 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauG2|4742 MGVLGLSLLFASVAFYFHRHPAYRPTVLLQWIGLGSLVPDSARPQEKSGHDETSSSSHSPGDTTTISLQTPSPPT SSHGPDSPTTPKASAVDAPSPEPVPTLQLSDPADRQQAAPTPGPASMMPPPPLPLASKSSKPSPQPYAIPTLPQF PAANSVQRASAAPRGPIPNRIPLSSGLVPPSTRSTPPERPSRKITLKPGRSPLDWARISGPNADLRGLPPETPYL RIPPSLLQKHNGRKGADAWMVLNSRVYNVSPYADYHPGGIPELMRGAGRDGTKLFGDIHPWVNYESMLSACMVGL FVDEPLNGDAINEMDEMD* |
| Coding | >OphauG2|4742 ATGGGCGTCTTGGGGCTGTCGCTGCTCTTCGCTTCCGTTGCCTTTTATTTCCACCGCCATCCAGCCTACCGTCCG ACTGTGCTCCTGCAATGGATTGGCCTGGGGTCCCTCGTCCCGGATTCAGCCCGACCCCAAGAAAAAAGTGGTCAT GATGAGACGTCGTCGTCATCCCATAGCCCTGGCGACACAACCACCATTTCTCTCCAGACTCCTTCGCCCCCCACA AGCAGCCATGGCCCCGATAGTCCGACAACACCAAAGGCATCGGCCGTCGACGCGCCCTCTCCGGAGCCAGTGCCC ACGTTGCAGCTCTCCGACCCGGCTGACCGACAACAAGCCGCTCCGACCCCTGGCCCCGCCTCAATGATGCCACCG CCTCCTCTTCCTCTCGCATCCAAATCTAGCAAACCTTCTCCTCAGCCCTACGCCATCCCGACCCTCCCACAGTTT CCTGCCGCCAATTCGGTGCAGCGCGCCTCGGCTGCTCCCCGTGGGCCTATACCCAACCGTATCCCGCTTTCATCC GGCCTTGTGCCTCCGTCAACTCGGTCAACTCCCCCCGAGCGCCCCAGTCGCAAAATCACGCTCAAGCCTGGCCGC TCGCCACTCGACTGGGCGCGTATATCAGGCCCCAACGCTGATCTCCGTGGCCTCCCTCCCGAGACGCCCTATCTG CGCATTCCACCCTCACTTCTCCAAAAACATAATGGGCGCAAAGGCGCTGACGCCTGGATGGTCCTCAACAGTAGA GTCTACAACGTCTCACCTTATGCCGACTACCATCCTGGCGGCATCCCCGAGCTTATGCGTGGCGCTGGCCGCGAC GGCACCAAGCTCTTTGGCGACATTCATCCCTGGGTCAACTACGAGTCCATGTTATCCGCATGCATGGTAGGTCTT TTCGTTGACGAGCCCTTGAATGGCGATGCAATAAACGAAATGGACGAAATGGACTAG |
| Transcript | >OphauG2|4742 ATGGGCGTCTTGGGGCTGTCGCTGCTCTTCGCTTCCGTTGCCTTTTATTTCCACCGCCATCCAGCCTACCGTCCG ACTGTGCTCCTGCAATGGATTGGCCTGGGGTCCCTCGTCCCGGATTCAGCCCGACCCCAAGAAAAAAGTGGTCAT GATGAGACGTCGTCGTCATCCCATAGCCCTGGCGACACAACCACCATTTCTCTCCAGACTCCTTCGCCCCCCACA AGCAGCCATGGCCCCGATAGTCCGACAACACCAAAGGCATCGGCCGTCGACGCGCCCTCTCCGGAGCCAGTGCCC ACGTTGCAGCTCTCCGACCCGGCTGACCGACAACAAGCCGCTCCGACCCCTGGCCCCGCCTCAATGATGCCACCG CCTCCTCTTCCTCTCGCATCCAAATCTAGCAAACCTTCTCCTCAGCCCTACGCCATCCCGACCCTCCCACAGTTT CCTGCCGCCAATTCGGTGCAGCGCGCCTCGGCTGCTCCCCGTGGGCCTATACCCAACCGTATCCCGCTTTCATCC GGCCTTGTGCCTCCGTCAACTCGGTCAACTCCCCCCGAGCGCCCCAGTCGCAAAATCACGCTCAAGCCTGGCCGC TCGCCACTCGACTGGGCGCGTATATCAGGCCCCAACGCTGATCTCCGTGGCCTCCCTCCCGAGACGCCCTATCTG CGCATTCCACCCTCACTTCTCCAAAAACATAATGGGCGCAAAGGCGCTGACGCCTGGATGGTCCTCAACAGTAGA GTCTACAACGTCTCACCTTATGCCGACTACCATCCTGGCGGCATCCCCGAGCTTATGCGTGGCGCTGGCCGCGAC GGCACCAAGCTCTTTGGCGACATTCATCCCTGGGTCAACTACGAGTCCATGTTATCCGCATGCATGGTAGGTCTT TTCGTTGACGAGCCCTTGAATGGCGATGCAATAAACGAAATGGACGAAATGGACTAG |
| Gene | >OphauG2|4742 ATGGGCGTCTTGGGGCTGTCGCTGCTCTTCGCTTCCGTTGCCTTTTATTTCCACCGCCATCCAGCCTACCGTCCG ACTGTGCTCCTGCAATGGATTGGCCTGGGGTCCCTCGTCCCGGATTCAGCCCGACCCCAAGAAAAAAGTGGTCAT GATGAGACGTCGTCGTCATCCCATAGCCCTGGCGACACAACCACCATTTCTCTCCAGACTCCTTCGCCCCCCACA AGCAGCCATGGCCCCGATAGTCCGACAACACCAAAGGCATCGGCCGTCGACGCGCCCTCTCCGGAGCCAGTGCCC ACGTTGCAGCTCTCCGACCCGGCTGACCGACAACAAGCCGCTCCGACCCCTGGCCCCGCCTCAATGATGCCACCG CCTCCTCTTCCTCTCGCATCCAAATCTAGCAAACCTTCTCCTCAGCCCTACGCCATCCCGACCCTCCCACAGTTT CCTGCCGCCAATTCGGTGCAGCGCGCCTCGGCTGCTCCCCGTGGGCCTATACCCAACCGTATCCCGCTTTCATCC GGCCTTGTGCCTCCGTCAACTCGGTCAACTCCCCCCGAGCGCCCCAGTCGCAAAATCACGCTCAAGCCTGGCCGC TCGCCACTCGACTGGGCGCGTATATCAGGCCCCAACGCTGATCTCCGTGGCCTCCCTCCCGAGACGCCCTATCTG CGCATTCCACCCTCACTTCTCCAAAAACATAATGGGCGCAAAGGCGCTGACGCCTGGATGGTCCTCAACAGTAGA GTCTACAACGTCTCACCTTATGCCGACTACCATCCTGGCGGCATCCCCGAGCTTATGCGTGGCGCTGGCCGCGAC GGCACCAAGCTCTTTGGCGACATTCATCCCTGGGTCAACTACGAGTCCATGTTATCCGCATGCATGGTAGGTCTT TTCGTTGACGAGCCCTTGAATGGCGATGCAATAAACGAAATGGACGAAATGGACTAG |