© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | OphauG2|4730 |
| Gene name | |
| Location | Contig_403:7225..8230 |
| Strand | + |
| Gene length (bp) | 1005 |
| Transcript length (bp) | 1005 |
| Coding sequence length (bp) | 1005 |
| Protein length (aa) | 335 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01239 | PPTA | Protein prenyltransferase alpha subunit repeat | 2.0E-04 | 146 | 168 |
| PF01239 | PPTA | Protein prenyltransferase alpha subunit repeat | 8.6E-04 | 180 | 208 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|A1L3L1|PTR1B_XENLA | Protein prenyltransferase alpha subunit repeat-containing protein 1-B (Fragment) OS=Xenopus laevis GN=ptar1-b PE=2 SV=1 | 77 | 252 | 4.0E-10 |
| sp|Q02202|ECM9_YEAST | Protein ECM9 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ECM9 PE=1 SV=2 | 93 | 272 | 2.0E-08 |
| sp|Q0IHB3|PTR1A_XENLA | Protein prenyltransferase alpha subunit repeat-containing protein 1-A OS=Xenopus laevis GN=ptar1-a PE=2 SV=1 | 76 | 249 | 2.0E-08 |
| sp|A3KPW7|PTAR1_DANRE | Protein prenyltransferase alpha subunit repeat-containing protein 1 OS=Danio rerio GN=ptar1 PE=2 SV=1 | 92 | 252 | 8.0E-07 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0008318 | protein prenyltransferase activity | Yes |
| GO:0018342 | protein prenylation | Yes |
| GO:0043170 | macromolecule metabolic process | No |
| GO:0140096 | catalytic activity, acting on a protein | No |
| GO:0019538 | protein metabolic process | No |
| GO:0044238 | primary metabolic process | No |
| GO:0008150 | biological_process | No |
| GO:0097354 | prenylation | No |
| GO:0008152 | metabolic process | No |
| GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | No |
| GO:0043412 | macromolecule modification | No |
| GO:0009987 | cellular process | No |
| GO:0006807 | nitrogen compound metabolic process | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0004659 | prenyltransferase activity | No |
| GO:0036211 | protein modification process | No |
| GO:0016740 | transferase activity | No |
| GO:0003674 | molecular_function | No |
| GO:1901564 | organonitrogen compound metabolic process | No |
| GO:0044237 | cellular metabolic process | No |
| GO:0003824 | catalytic activity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 48 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauG2|4730 MSRALDKGIQEALEQADLEIPFKHISTALSQIRDALLDIELLGSSHASIDATLLQDGNAIAIPKRRLVEAFICAR KRFISFQQSKELQNTRKQHVLSVTAVMLLMDPEHLTAANARKQVLSEALEMCPSDVAPLLNEKFLIDSLLTSHLH RHTKSPTLWSHRRWLMRRISAMGAANNIVEELASVVFVSAERHPRNYYAWGHARLLVESTVAHSGKPEAELDIKR MVQDTKKWCFNHHDDVSGWMFLAFLLEKWPSCTASVLRETLQLVQSFRWRNESVWHFLRNVVSMQSQAAGLSVNQ VRTVCNALLKDAADGDQKVLNDALKWLEKYTEFE* |
| Coding | >OphauG2|4730 ATGTCACGGGCTCTCGACAAGGGCATTCAAGAGGCACTCGAGCAGGCCGACCTTGAAATTCCATTTAAGCACATA TCCACAGCTTTATCACAGATTCGTGACGCCTTGCTCGACATTGAACTGTTGGGATCAAGCCACGCTTCGATTGAC GCAACTCTACTCCAGGATGGCAATGCCATAGCAATCCCCAAGCGGCGCCTTGTGGAGGCTTTTATATGTGCACGG AAAAGATTCATTTCCTTTCAGCAAAGCAAAGAGCTTCAAAACACGCGTAAACAACATGTGCTCTCTGTGACGGCC GTCATGCTGCTTATGGATCCTGAGCATCTGACTGCGGCAAATGCGCGCAAACAAGTGCTCTCAGAGGCTTTGGAG ATGTGTCCAAGTGACGTAGCACCTCTGTTGAATGAAAAGTTTTTGATAGACAGTCTTCTCACAAGTCACCTTCAT CGACACACAAAGTCGCCGACCCTCTGGAGTCACCGGCGATGGCTGATGAGGAGAATCAGTGCCATGGGAGCAGCA AACAATATCGTTGAGGAACTGGCAAGCGTTGTCTTCGTCTCAGCCGAGAGACATCCGCGAAATTACTATGCATGG GGCCATGCTAGGCTCCTTGTCGAGTCTACCGTCGCCCACAGCGGCAAACCTGAAGCCGAGCTGGATATAAAAAGA ATGGTACAAGACACCAAGAAATGGTGCTTCAACCACCACGATGATGTTTCTGGCTGGATGTTTTTAGCTTTTCTC CTTGAGAAATGGCCCTCTTGCACCGCGTCTGTCTTGCGAGAAACGTTGCAGCTTGTCCAATCGTTTCGATGGCGC AACGAATCAGTATGGCATTTTCTTCGCAATGTGGTGTCAATGCAATCTCAGGCAGCAGGGCTGTCAGTGAATCAA GTTCGAACCGTCTGTAATGCTCTCCTCAAGGATGCTGCAGACGGGGATCAAAAAGTCCTTAATGACGCTTTGAAG TGGCTCGAAAAATACACAGAATTTGAGTAG |
| Transcript | >OphauG2|4730 ATGTCACGGGCTCTCGACAAGGGCATTCAAGAGGCACTCGAGCAGGCCGACCTTGAAATTCCATTTAAGCACATA TCCACAGCTTTATCACAGATTCGTGACGCCTTGCTCGACATTGAACTGTTGGGATCAAGCCACGCTTCGATTGAC GCAACTCTACTCCAGGATGGCAATGCCATAGCAATCCCCAAGCGGCGCCTTGTGGAGGCTTTTATATGTGCACGG AAAAGATTCATTTCCTTTCAGCAAAGCAAAGAGCTTCAAAACACGCGTAAACAACATGTGCTCTCTGTGACGGCC GTCATGCTGCTTATGGATCCTGAGCATCTGACTGCGGCAAATGCGCGCAAACAAGTGCTCTCAGAGGCTTTGGAG ATGTGTCCAAGTGACGTAGCACCTCTGTTGAATGAAAAGTTTTTGATAGACAGTCTTCTCACAAGTCACCTTCAT CGACACACAAAGTCGCCGACCCTCTGGAGTCACCGGCGATGGCTGATGAGGAGAATCAGTGCCATGGGAGCAGCA AACAATATCGTTGAGGAACTGGCAAGCGTTGTCTTCGTCTCAGCCGAGAGACATCCGCGAAATTACTATGCATGG GGCCATGCTAGGCTCCTTGTCGAGTCTACCGTCGCCCACAGCGGCAAACCTGAAGCCGAGCTGGATATAAAAAGA ATGGTACAAGACACCAAGAAATGGTGCTTCAACCACCACGATGATGTTTCTGGCTGGATGTTTTTAGCTTTTCTC CTTGAGAAATGGCCCTCTTGCACCGCGTCTGTCTTGCGAGAAACGTTGCAGCTTGTCCAATCGTTTCGATGGCGC AACGAATCAGTATGGCATTTTCTTCGCAATGTGGTGTCAATGCAATCTCAGGCAGCAGGGCTGTCAGTGAATCAA GTTCGAACCGTCTGTAATGCTCTCCTCAAGGATGCTGCAGACGGGGATCAAAAAGTCCTTAATGACGCTTTGAAG TGGCTCGAAAAATACACAGAATTTGAGTAG |
| Gene | >OphauG2|4730 ATGTCACGGGCTCTCGACAAGGGCATTCAAGAGGCACTCGAGCAGGCCGACCTTGAAATTCCATTTAAGCACATA TCCACAGCTTTATCACAGATTCGTGACGCCTTGCTCGACATTGAACTGTTGGGATCAAGCCACGCTTCGATTGAC GCAACTCTACTCCAGGATGGCAATGCCATAGCAATCCCCAAGCGGCGCCTTGTGGAGGCTTTTATATGTGCACGG AAAAGATTCATTTCCTTTCAGCAAAGCAAAGAGCTTCAAAACACGCGTAAACAACATGTGCTCTCTGTGACGGCC GTCATGCTGCTTATGGATCCTGAGCATCTGACTGCGGCAAATGCGCGCAAACAAGTGCTCTCAGAGGCTTTGGAG ATGTGTCCAAGTGACGTAGCACCTCTGTTGAATGAAAAGTTTTTGATAGACAGTCTTCTCACAAGTCACCTTCAT CGACACACAAAGTCGCCGACCCTCTGGAGTCACCGGCGATGGCTGATGAGGAGAATCAGTGCCATGGGAGCAGCA AACAATATCGTTGAGGAACTGGCAAGCGTTGTCTTCGTCTCAGCCGAGAGACATCCGCGAAATTACTATGCATGG GGCCATGCTAGGCTCCTTGTCGAGTCTACCGTCGCCCACAGCGGCAAACCTGAAGCCGAGCTGGATATAAAAAGA ATGGTACAAGACACCAAGAAATGGTGCTTCAACCACCACGATGATGTTTCTGGCTGGATGTTTTTAGCTTTTCTC CTTGAGAAATGGCCCTCTTGCACCGCGTCTGTCTTGCGAGAAACGTTGCAGCTTGTCCAATCGTTTCGATGGCGC AACGAATCAGTATGGCATTTTCTTCGCAATGTGGTGTCAATGCAATCTCAGGCAGCAGGGCTGTCAGTGAATCAA GTTCGAACCGTCTGTAATGCTCTCCTCAAGGATGCTGCAGACGGGGATCAAAAAGTCCTTAATGACGCTTTGAAG TGGCTCGAAAAATACACAGAATTTGAGTAG |