Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauG2|473
Gene name
LocationContig_1104:108..2411
Strand+
Gene length (bp)2303
Transcript length (bp)2031
Coding sequence length (bp)2031
Protein length (aa) 677

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00172 Zn_clus Fungal Zn(2)-Cys(6) binuclear cluster domain 5.1E-09 13 45

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|P28349|NIT4_NEUCR Nitrogen assimilation transcription factor nit-4 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=nit-4 PE=3 SV=2 3 516 3.0E-18
sp|P28348|NIRA_EMENI Nitrogen assimilation transcription factor nirA OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=nirA PE=3 SV=1 6 524 6.0E-15
sp|O13360|FLUF_NEUCR Conidial development protein fluffy OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=fl PE=2 SV=1 5 311 8.0E-13

GO

GO Term Description Terminal node
GO:0008270 zinc ion binding Yes
GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific Yes
GO:0006355 regulation of transcription, DNA-templated Yes
GO:0031323 regulation of cellular metabolic process No
GO:0050794 regulation of cellular process No
GO:1903506 regulation of nucleic acid-templated transcription No
GO:2001141 regulation of RNA biosynthetic process No
GO:0019222 regulation of metabolic process No
GO:0043167 ion binding No
GO:0046872 metal ion binding No
GO:0050789 regulation of biological process No
GO:0019219 regulation of nucleobase-containing compound metabolic process No
GO:0010468 regulation of gene expression No
GO:0060255 regulation of macromolecule metabolic process No
GO:0080090 regulation of primary metabolic process No
GO:0008150 biological_process No
GO:0140110 transcription regulator activity No
GO:0009889 regulation of biosynthetic process No
GO:0065007 biological regulation No
GO:0005488 binding No
GO:0046914 transition metal ion binding No
GO:0003674 molecular_function No
GO:0051171 regulation of nitrogen compound metabolic process No
GO:0010556 regulation of macromolecule biosynthetic process No
GO:0003700 DNA-binding transcription factor activity No
GO:0043169 cation binding No
GO:0051252 regulation of RNA metabolic process No
GO:0031326 regulation of cellular biosynthetic process No

SignalP

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SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 12 0.45

Transmembrane Domains

(None)

Transcription Factor Class

Transcription Factor Class
(based on PFAM domains)
Fungal Specific TF

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauG2|473
MATRPKRRTVIAACNQCRKKKAKCDAARPHCARCRHKALDCVYETDRTETHNRARCRKLAELGSKTDFDGELVRI
LRSRRDSDAAAIHQRLRAGQSSESIVGIIRDGDLLLQCALRPESRLQYQLPYISAMPDFLLTAENPYLGSLLYNR
TVNSDSAATTSPKLANQFYQMYDIPYRAAELIDPRIDRVKASRWTTITTSDELVRTLLKTYLQFELAYHNFFHHD
YFLQDLVAGRNRYCSSLLLNAVLSGACYGQTSLAWRSEFWNPRSLGYQFLAEAKRLWELQRGEAYKITTIQAGAV
LSICCNLNGADKIGNHYLYQSIAMAEHLGLFSQRFESQSPGLRAVYATTAWSLFSWQALHKFHFFEEPRLDRPPA
IELPQDLGETWIRYPHCSRPMPLDHSLTVRAVFQFRALLNKISLRCFGRQGQEQGPLAFDEAMAFRNELTRWLDS
LPAPFSAKYMVLPSQLKMHLHYHEAIVMLFESLTTDSNGLGADNVAQVQEMIDFSKTCMETLMRLYYIRHSFEHW
DSFLIVYLTFVGFFTIKRLEGQTHDSRGGLVSTIVLCCKGLYDQSRHCYLAEAFLTLLRDGSSADVRGMLADVDH
GEERKRFVAGQIKSLYSVNIARVGDDRESKRLDRLVQACSGLDLGEGDDEGDEGAGGGEGGGEGGGEAKELRHAT
V*
Coding >OphauG2|473
ATGGCCACGCGGCCAAAACGACGCACCGTCATTGCAGCATGCAACCAATGTCGAAAGAAAAAGGCAAAGTGCGAT
GCGGCGCGTCCACATTGTGCCAGGTGTCGGCACAAGGCGCTCGATTGCGTCTACGAGACAGACAGGACCGAGACG
CACAACCGTGCTCGCTGCCGAAAACTGGCCGAGCTTGGCAGCAAGACCGATTTCGATGGCGAACTGGTGCGTATT
CTGCGAAGCAGACGTGACAGCGACGCTGCAGCCATTCATCAGAGACTCAGGGCTGGCCAGAGCTCCGAGTCTATT
GTTGGCATAATTCGCGACGGCGATTTGCTTTTGCAATGTGCTCTGCGCCCCGAGTCCCGCTTGCAGTATCAGTTG
CCCTATATATCCGCCATGCCTGATTTTCTCTTGACGGCAGAAAATCCCTATCTTGGCTCCTTGCTCTACAACCGA
ACTGTCAACTCTGACTCTGCCGCAACCACAAGCCCCAAACTTGCCAACCAGTTCTATCAAATGTACGACATTCCC
TACCGTGCTGCAGAGCTTATCGACCCTCGAATCGACCGCGTCAAAGCTTCCCGGTGGACTACTATAACCACATCA
GATGAGCTTGTGCGCACACTGCTCAAGACTTACTTGCAGTTTGAGCTTGCTTACCACAATTTCTTCCATCATGAC
TACTTCCTCCAAGACCTGGTTGCCGGCCGCAACAGATATTGCTCTTCGTTGCTCCTCAATGCCGTGCTCTCGGGT
GCCTGCTATGGCCAAACAAGTCTTGCCTGGCGTTCCGAGTTTTGGAATCCGCGAAGCCTTGGCTATCAATTCTTG
GCTGAAGCCAAGCGGCTATGGGAGCTCCAAAGAGGAGAAGCATATAAAATCACCACCATTCAGGCCGGCGCAGTG
CTAAGCATATGCTGCAACTTGAATGGCGCTGACAAGATTGGAAACCATTACCTGTATCAGTCTATTGCCATGGCA
GAGCATCTCGGACTCTTCTCCCAGCGCTTTGAGTCACAAAGTCCGGGGCTACGCGCAGTCTACGCAACAACAGCT
TGGTCTCTATTCAGCTGGCAGGCGCTGCACAAATTTCACTTCTTCGAGGAGCCACGTCTTGACAGGCCGCCCGCC
ATTGAATTGCCTCAAGACTTGGGAGAGACTTGGATTCGGTATCCACACTGCAGCAGACCAATGCCCCTTGACCAC
AGCTTGACTGTCCGGGCCGTTTTTCAGTTTCGAGCCCTCTTGAATAAAATTAGCCTTCGGTGCTTTGGTCGACAA
GGACAGGAGCAAGGGCCGTTGGCTTTTGACGAAGCCATGGCGTTTCGAAACGAGTTAACAAGGTGGCTGGACTCG
CTTCCGGCTCCCTTTTCAGCAAAGTACATGGTACTGCCCTCGCAGTTAAAGATGCACCTGCACTACCACGAAGCC
ATTGTCATGCTATTTGAAAGCTTGACAACAGACAGCAATGGACTGGGCGCTGATAATGTAGCGCAGGTGCAAGAA
ATGATCGACTTTTCCAAAACGTGCATGGAAACATTGATGCGGCTATACTACATTCGGCACAGTTTCGAGCACTGG
GACTCATTCTTGATTGTCTACCTGACCTTTGTCGGCTTCTTCACAATCAAAAGGCTTGAGGGTCAGACGCATGAC
AGTCGTGGTGGGCTGGTGTCGACAATTGTGCTCTGTTGCAAGGGCCTGTATGATCAAAGCCGGCACTGCTACCTT
GCCGAGGCTTTTTTGACTCTGTTGCGTGATGGGTCGAGTGCTGACGTTCGGGGCATGCTTGCAGATGTAGACCAT
GGGGAAGAGAGGAAAAGGTTCGTGGCGGGGCAGATCAAGTCTTTGTACTCGGTCAACATTGCGCGCGTTGGAGAT
GATCGGGAGAGCAAGCGGCTCGACAGGCTGGTGCAGGCATGTTCAGGGCTGGACCTGGGCGAGGGAGACGACGAG
GGAGACGAGGGCGCGGGAGGAGGAGAGGGAGGAGGAGAGGGAGGAGGAGAGGCAAAGGAGCTGCGACACGCGACT
GTTTGA
Transcript >OphauG2|473
ATGGCCACGCGGCCAAAACGACGCACCGTCATTGCAGCATGCAACCAATGTCGAAAGAAAAAGGCAAAGTGCGAT
GCGGCGCGTCCACATTGTGCCAGGTGTCGGCACAAGGCGCTCGATTGCGTCTACGAGACAGACAGGACCGAGACG
CACAACCGTGCTCGCTGCCGAAAACTGGCCGAGCTTGGCAGCAAGACCGATTTCGATGGCGAACTGGTGCGTATT
CTGCGAAGCAGACGTGACAGCGACGCTGCAGCCATTCATCAGAGACTCAGGGCTGGCCAGAGCTCCGAGTCTATT
GTTGGCATAATTCGCGACGGCGATTTGCTTTTGCAATGTGCTCTGCGCCCCGAGTCCCGCTTGCAGTATCAGTTG
CCCTATATATCCGCCATGCCTGATTTTCTCTTGACGGCAGAAAATCCCTATCTTGGCTCCTTGCTCTACAACCGA
ACTGTCAACTCTGACTCTGCCGCAACCACAAGCCCCAAACTTGCCAACCAGTTCTATCAAATGTACGACATTCCC
TACCGTGCTGCAGAGCTTATCGACCCTCGAATCGACCGCGTCAAAGCTTCCCGGTGGACTACTATAACCACATCA
GATGAGCTTGTGCGCACACTGCTCAAGACTTACTTGCAGTTTGAGCTTGCTTACCACAATTTCTTCCATCATGAC
TACTTCCTCCAAGACCTGGTTGCCGGCCGCAACAGATATTGCTCTTCGTTGCTCCTCAATGCCGTGCTCTCGGGT
GCCTGCTATGGCCAAACAAGTCTTGCCTGGCGTTCCGAGTTTTGGAATCCGCGAAGCCTTGGCTATCAATTCTTG
GCTGAAGCCAAGCGGCTATGGGAGCTCCAAAGAGGAGAAGCATATAAAATCACCACCATTCAGGCCGGCGCAGTG
CTAAGCATATGCTGCAACTTGAATGGCGCTGACAAGATTGGAAACCATTACCTGTATCAGTCTATTGCCATGGCA
GAGCATCTCGGACTCTTCTCCCAGCGCTTTGAGTCACAAAGTCCGGGGCTACGCGCAGTCTACGCAACAACAGCT
TGGTCTCTATTCAGCTGGCAGGCGCTGCACAAATTTCACTTCTTCGAGGAGCCACGTCTTGACAGGCCGCCCGCC
ATTGAATTGCCTCAAGACTTGGGAGAGACTTGGATTCGGTATCCACACTGCAGCAGACCAATGCCCCTTGACCAC
AGCTTGACTGTCCGGGCCGTTTTTCAGTTTCGAGCCCTCTTGAATAAAATTAGCCTTCGGTGCTTTGGTCGACAA
GGACAGGAGCAAGGGCCGTTGGCTTTTGACGAAGCCATGGCGTTTCGAAACGAGTTAACAAGGTGGCTGGACTCG
CTTCCGGCTCCCTTTTCAGCAAAGTACATGGTACTGCCCTCGCAGTTAAAGATGCACCTGCACTACCACGAAGCC
ATTGTCATGCTATTTGAAAGCTTGACAACAGACAGCAATGGACTGGGCGCTGATAATGTAGCGCAGGTGCAAGAA
ATGATCGACTTTTCCAAAACGTGCATGGAAACATTGATGCGGCTATACTACATTCGGCACAGTTTCGAGCACTGG
GACTCATTCTTGATTGTCTACCTGACCTTTGTCGGCTTCTTCACAATCAAAAGGCTTGAGGGTCAGACGCATGAC
AGTCGTGGTGGGCTGGTGTCGACAATTGTGCTCTGTTGCAAGGGCCTGTATGATCAAAGCCGGCACTGCTACCTT
GCCGAGGCTTTTTTGACTCTGTTGCGTGATGGGTCGAGTGCTGACGTTCGGGGCATGCTTGCAGATGTAGACCAT
GGGGAAGAGAGGAAAAGGTTCGTGGCGGGGCAGATCAAGTCTTTGTACTCGGTCAACATTGCGCGCGTTGGAGAT
GATCGGGAGAGCAAGCGGCTCGACAGGCTGGTGCAGGCATGTTCAGGGCTGGACCTGGGCGAGGGAGACGACGAG
GGAGACGAGGGCGCGGGAGGAGGAGAGGGAGGAGGAGAGGGAGGAGGAGAGGCAAAGGAGCTGCGACACGCGACT
GTTTGA
Gene >OphauG2|473
ATGGCCACGCGGCCAAAACGACGCACCGTCATTGCAGCATGCAACCAATGTCGAAAGAAAAAGGCAAAGGTATCC
TCCCAGCGGCAATGCTGCCCCCAATCGTTGTGCTAAGGGAAGCTAGTGCGATGCGGCGCGTCCACATTGTGCCAG
GTGTCGGCACAAGGCGCTCGATTGCGTCTACGAGACAGACAGGACCGAGACGCACAACCGTGCTCGCTGCCGAAA
ACTGGCCGAGCTTGGCAGCAAGACCGATTTCGATGGCGAACTGGTGCGTATTCTGCGAAGCAGACGTGACAGCGA
CGCTGCAGCCATTCATCAGAGACTCAGGGCTGGCCAGAGCTCCGAGTCTATTGTTGGCATAATTCGCGACGGCGA
TTTGCTTTTGCAATGTGCTCTGCGCCCCGAGTCCCGCTTGCAGTATCAGTTGCCCTATATATCCGCCATGCCTGA
TTTTCTCTTGACGGCAGAAAATCCCTATCTTGGCTCCTTGCTCTACAACCGAACTGTCAACTCTGACTCTGCCGC
AACCACAAGCCCCAAACTTGCCAACCAGTTCTATCAAATGTACGACATTCCCTACCGTGCTGCAGAGCTTATCGA
CCCTCGAATCGACCGCGTCAAAGCTTCCCGGTGGACTACTATAACCACATCAGATGAGCTTGTGCGCACACTGCT
CAAGACTTACTTGCAGTTTGAGCTTGCTTACCACAATTTCTTCCATCATGACTACTTCCTCCAAGACCTGGTTGC
CGGCCGCAACAGATATTGCTCTTCGTTGCTCCTCAATGCCGTGCTCTCGGGTGCCTGCGTACGTATCACACCTTG
GCTCCTGTGCCCATGACGCGGCAAAACCTTGATGCCAACCTTGAATTAGTATGGCCAAACAAGTCTTGCCTGGCG
TTCCGAGTTTTGGAATCCGCGAAGCCTTGGCTATCAATTCTTGGCTGAAGCCAAGCGGCTATGGGAGCTCCAAAG
AGGAGAAGCATATAAAATCACCACCATTCAGGCCGGCGCAGTGCTAAGCATATGCTGCAACTTGAATGGCGCTGA
CAAGATTGGAAACCATTACCTGTATCAGTCTATTGCCATGGCAGAGCATCTCGGACTCTTCTCCCAGCGCTTTGA
GTCACAAAGTCCGGGGCTACGCGCAGTCTACGCAACAACAGCTTGGTCTCTATTCAGCTGGCAGGCGTCAGTAAT
TTGCATCTTGTTGTGTATTAAAAAAAAGGGGGGGGTATTGCGATTGGATAAAGCTTACATTGCGTCAACAACAGG
CTGCACAAATTTCACTTCTTCGAGGAGCCACGTCTTGACAGGCCGCCCGCCATTGAATTGCCTCAAGACTTGGGA
GAGACTTGGATTCGGTATCCACACTGCAGCAGACCAATGCCCCTTGACCACAGCTTGACTGTCCGGGCCGTTTTT
CAGTTTCGAGCCCTCTTGAATAAAATTAGCCTTCGGTGCTTTGGTCGACAAGGACAGGAGCAAGGGCCGTTGGCT
TTTGACGAAGCCATGGCGTTTCGAAACGAGTTAACAAGGTGGCTGGACTCGCTTCCGGCTCCCTTTTCAGCAAAG
TACATGGTACTGCCCTCGCAGTTAAAGATGCAGTAAGACGTGCACCCGTGCAACCATGATTGGCAACAAGAAGCT
AGGCGTGAGAGGCTGACTAGAGAGGCAGCCTGCACTACCACGAAGCCATTGTCATGCTATTTGAAAGCTTGACAA
CAGACAGCAATGGACTGGGCGCTGATAATGTAGCGCAGGTGCAAGAAATGATCGACTTTTCCAAAACGTGCATGG
AAACATTGATGCGGCTATACTACATTCGGCACAGTTTCGAGCACTGGGACTCATTCTTGATTGTCTACCTGACCT
TTGTCGGCTTCTTCACAATCAAAAGGCTTGAGGGTCAGACGCATGACAGTCGTGGTGGGCTGGTGTCGACAATTG
TGCTCTGTTGCAAGGGCCTGTATGATCAAAGCCGGCACTGCTACCTTGCCGAGGCTTTTTTGACTCTGTTGCGTG
ATGGGTCGAGTGCTGACGTTCGGGGCATGCTTGCAGATGTAGACCATGGGGAAGAGAGGAAAAGGTTCGTGGCGG
GGCAGATCAAGTCTTTGTACTCGGTCAACATTGCGCGCGTTGGAGATGATCGGGAGAGCAAGCGGCTCGACAGGC
TGGTGCAGGCATGTTCAGGGCTGGACCTGGGCGAGGGAGACGACGAGGGAGACGAGGGCGCGGGAGGAGGAGAGG
GAGGAGGAGAGGGAGGAGGAGAGGCAAAGGAGCTGCGACACGCGACTGTTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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