Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauG2|4718
Gene name
LocationContig_401:10588..11603
Strand-
Gene length (bp)1015
Transcript length (bp)951
Coding sequence length (bp)951
Protein length (aa) 317

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04893 Yip1 Yip1 domain 6.9E-08 109 295

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|O94348|YIP1_SCHPO Protein transport protein yip1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=yip1 PE=3 SV=1 17 301 1.0E-62
sp|Q54QY3|YIPF5_DICDI Protein YIPF5 homolog OS=Dictyostelium discoideum GN=yipf5 PE=3 SV=1 81 299 8.0E-45
sp|Q9JIM5|YIPF7_MOUSE Protein YIPF7 OS=Mus musculus GN=Yipf7 PE=2 SV=1 19 299 6.0E-42
sp|Q6P5I8|YIPF5_DANRE Protein YIPF5 OS=Danio rerio GN=yipf5 PE=2 SV=1 84 299 7.0E-41
sp|Q66KA5|YIPF5_XENTR Protein YIPF5 OS=Xenopus tropicalis GN=yipf5 PE=2 SV=1 84 299 2.0E-40
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Swissprot ID Swissprot Description Start End E-value
sp|O94348|YIP1_SCHPO Protein transport protein yip1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=yip1 PE=3 SV=1 17 301 1.0E-62
sp|Q54QY3|YIPF5_DICDI Protein YIPF5 homolog OS=Dictyostelium discoideum GN=yipf5 PE=3 SV=1 81 299 8.0E-45
sp|Q9JIM5|YIPF7_MOUSE Protein YIPF7 OS=Mus musculus GN=Yipf7 PE=2 SV=1 19 299 6.0E-42
sp|Q6P5I8|YIPF5_DANRE Protein YIPF5 OS=Danio rerio GN=yipf5 PE=2 SV=1 84 299 7.0E-41
sp|Q66KA5|YIPF5_XENTR Protein YIPF5 OS=Xenopus tropicalis GN=yipf5 PE=2 SV=1 84 299 2.0E-40
sp|Q7SXS2|YIPF5_XENLA Protein YIPF5 OS=Xenopus laevis GN=yipf5 PE=2 SV=1 19 299 2.0E-40
sp|Q8N8F6|YIPF7_HUMAN Protein YIPF7 OS=Homo sapiens GN=YIPF7 PE=2 SV=2 82 299 3.0E-40
sp|Q5R6W5|YIPF5_PONAB Protein YIPF5 OS=Pongo abelii GN=YIPF5 PE=2 SV=1 79 299 7.0E-40
sp|Q969M3|YIPF5_HUMAN Protein YIPF5 OS=Homo sapiens GN=YIPF5 PE=1 SV=1 79 299 7.0E-40
sp|Q4R5M4|YIPF5_MACFA Protein YIPF5 OS=Macaca fascicularis GN=YIPF5 PE=2 SV=1 79 299 9.0E-40
sp|Q5E9E8|YIPF5_BOVIN Protein YIPF5 OS=Bos taurus GN=YIPF5 PE=2 SV=1 79 299 1.0E-39
sp|P53039|YIP1_YEAST Protein transport protein YIP1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YIP1 PE=1 SV=1 57 299 3.0E-39
sp|Q9EQQ2|YIPF5_MOUSE Protein YIPF5 OS=Mus musculus GN=Yipf5 PE=1 SV=1 94 299 9.0E-34
sp|Q5XID0|YIPF5_RAT Protein YIPF5 OS=Rattus norvegicus GN=Yipf5 PE=2 SV=1 94 299 1.0E-33
sp|A5D7K7|YIPF7_BOVIN Protein YIPF7 OS=Bos taurus GN=YIPF7 PE=2 SV=1 95 299 1.0E-33
sp|Q6IQ85|YIPF6_DANRE Protein YIPF6 OS=Danio rerio GN=yipf6 PE=2 SV=1 216 294 7.0E-06
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GO

GO Term Description Terminal node
GO:0016020 membrane Yes
GO:0005575 cellular_component No
GO:0110165 cellular anatomical entity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 48 0.45

Transmembrane Domains

Domain # Start End Length
1 125 142 17
2 147 169 22
3 223 245 22
4 251 273 22
5 280 299 19

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauG2|4718
MANYYGAQPYGASAGAPNNLQFYPSSYSPAPSHQPQAATYGYPGAAAAPGFGAPAFVGSGVSGRMGEHGGLRTGW
LAAFSTEGYDGEPPLWEELGVNFAHIQKKTLAVLNPFRHIDQHLMDDSDLAGPILFFLLFGTFLLFSGKVHFGYI
YGLALLGSTSLHTILSLMSPTEPTDAAHEYQPQYGPGASNPASSAPDAASAMQHPGAKSGGHFSATLTFPRSASV
LGYCLLPLVATSLCGVVMPMDTPLGIIVTMAAIVWCTYSASGMFCAVGRMTGMRVLVAYPLALFYVGFGIIGIFS
SRGSGSLANAAAKLNP*
Coding >OphauG2|4718
ATGGCCAACTACTACGGCGCCCAGCCCTATGGCGCCTCTGCCGGCGCGCCCAACAACCTGCAGTTCTACCCGTCG
TCCTACTCCCCCGCGCCCTCGCACCAGCCCCAAGCCGCCACATACGGCTACCCCGGCGCCGCTGCTGCCCCTGGC
TTCGGCGCCCCGGCCTTTGTGGGCAGCGGTGTCTCCGGCCGCATGGGCGAGCACGGCGGCCTGCGCACTGGATGG
CTGGCTGCCTTTTCCACAGAGGGCTATGACGGCGAGCCGCCTCTTTGGGAAGAGCTGGGCGTCAATTTTGCCCAC
ATTCAGAAAAAGACACTGGCAGTCCTGAACCCCTTCCGCCACATTGACCAGCATCTCATGGACGATTCAGACCTC
GCCGGTCCTATCCTCTTCTTTCTTCTCTTCGGCACCTTTCTCCTCTTCTCCGGAAAAGTCCACTTTGGCTACATT
TACGGCCTAGCCCTCTTGGGCTCTACCTCGCTACACACCATTCTCTCGCTCATGTCTCCGACTGAGCCCACAGAC
GCCGCCCACGAGTATCAGCCACAGTACGGCCCTGGCGCTTCGAACCCGGCCTCGTCGGCTCCTGATGCGGCCTCT
GCCATGCAACACCCCGGCGCCAAGTCGGGCGGTCACTTCTCTGCTACCCTCACATTCCCCCGTTCGGCCTCCGTC
TTGGGATACTGTCTGCTGCCCCTTGTTGCCACGTCACTCTGCGGCGTCGTCATGCCCATGGATACGCCCTTGGGC
ATCATTGTCACCATGGCTGCCATTGTGTGGTGTACCTATAGTGCCAGCGGCATGTTTTGCGCCGTTGGTCGCATG
ACGGGCATGCGTGTCCTCGTCGCCTACCCACTGGCTCTCTTCTACGTCGGCTTCGGCATCATCGGCATCTTCAGT
AGCAGAGGCAGTGGCTCGCTTGCTAATGCCGCCGCCAAGCTGAATCCGTGA
Transcript >OphauG2|4718
ATGGCCAACTACTACGGCGCCCAGCCCTATGGCGCCTCTGCCGGCGCGCCCAACAACCTGCAGTTCTACCCGTCG
TCCTACTCCCCCGCGCCCTCGCACCAGCCCCAAGCCGCCACATACGGCTACCCCGGCGCCGCTGCTGCCCCTGGC
TTCGGCGCCCCGGCCTTTGTGGGCAGCGGTGTCTCCGGCCGCATGGGCGAGCACGGCGGCCTGCGCACTGGATGG
CTGGCTGCCTTTTCCACAGAGGGCTATGACGGCGAGCCGCCTCTTTGGGAAGAGCTGGGCGTCAATTTTGCCCAC
ATTCAGAAAAAGACACTGGCAGTCCTGAACCCCTTCCGCCACATTGACCAGCATCTCATGGACGATTCAGACCTC
GCCGGTCCTATCCTCTTCTTTCTTCTCTTCGGCACCTTTCTCCTCTTCTCCGGAAAAGTCCACTTTGGCTACATT
TACGGCCTAGCCCTCTTGGGCTCTACCTCGCTACACACCATTCTCTCGCTCATGTCTCCGACTGAGCCCACAGAC
GCCGCCCACGAGTATCAGCCACAGTACGGCCCTGGCGCTTCGAACCCGGCCTCGTCGGCTCCTGATGCGGCCTCT
GCCATGCAACACCCCGGCGCCAAGTCGGGCGGTCACTTCTCTGCTACCCTCACATTCCCCCGTTCGGCCTCCGTC
TTGGGATACTGTCTGCTGCCCCTTGTTGCCACGTCACTCTGCGGCGTCGTCATGCCCATGGATACGCCCTTGGGC
ATCATTGTCACCATGGCTGCCATTGTGTGGTGTACCTATAGTGCCAGCGGCATGTTTTGCGCCGTTGGTCGCATG
ACGGGCATGCGTGTCCTCGTCGCCTACCCACTGGCTCTCTTCTACGTCGGCTTCGGCATCATCGGCATCTTCAGT
AGCAGAGGCAGTGGCTCGCTTGCTAATGCCGCCGCCAAGCTGAATCCGTGA
Gene >OphauG2|4718
ATGGCCAACTACTACGGCGCCCAGCCCTATGGCGCCTCTGCCGGCGCGCCCAACAACCTGCAGTTCTACCCGTCG
TCCTACTCCCCCGCGCCCTCGCACCAGCCCCAAGCCGCCACATACGGCTACCCCGGCGCCGCTGCTGCCCCTGGC
TTCGGCGCCCCGGCCTTTGTGGGCAGCGGTGTCTCCGGCCGCATGGGCGAGCACGGCGGCCTGCGCACTGGATGG
CTGGCTGCCTTTTCCACAGAGGGCTATGACGGCGAGCCGCCTCTTTGGGAAGAGCTGGGCGTCAATTTTGCCCAC
ATTCAGAAAAAGGTGTGTCCCCATGGACCCGAGAGCTGCTTGCCACGAGAGAGCCAGTTGCTGACCCTCGCCCCA
GACACTGGCAGTCCTGAACCCCTTCCGCCACATTGACCAGCATCTCATGGACGATTCAGACCTCGCCGGTCCTAT
CCTCTTCTTTCTTCTCTTCGGCACCTTTCTCCTCTTCTCCGGAAAAGTCCACTTTGGCTACATTTACGGCCTAGC
CCTCTTGGGCTCTACCTCGCTACACACCATTCTCTCGCTCATGTCTCCGACTGAGCCCACAGACGCCGCCCACGA
GTATCAGCCACAGTACGGCCCTGGCGCTTCGAACCCGGCCTCGTCGGCTCCTGATGCGGCCTCTGCCATGCAACA
CCCCGGCGCCAAGTCGGGCGGTCACTTCTCTGCTACCCTCACATTCCCCCGTTCGGCCTCCGTCTTGGGATACTG
TCTGCTGCCCCTTGTTGCCACGTCACTCTGCGGCGTCGTCATGCCCATGGATACGCCCTTGGGCATCATTGTCAC
CATGGCTGCCATTGTGTGGTGTACCTATAGTGCCAGCGGCATGTTTTGCGCCGTTGGTCGCATGACGGGCATGCG
TGTCCTCGTCGCCTACCCACTGGCTCTCTTCTACGTCGGCTTCGGCATCATCGGCATCTTCAGTAGCAGAGGCAG
TGGCTCGCTTGCTAATGCCGCCGCCAAGCTGAATCCGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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