© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauG2|4680 |
| Gene name | |
| Location | Contig_4:61777..62969 |
| Strand | + |
| Gene length (bp) | 1192 |
| Transcript length (bp) | 990 |
| Coding sequence length (bp) | 990 |
| Protein length (aa) | 330 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF06966 | DUF1295 | Protein of unknown function (DUF1295) | 9.6E-56 | 26 | 266 |
| PF02544 | Steroid_dh | 3-oxo-5-alpha-steroid 4-dehydrogenase | 6.3E-05 | 139 | 209 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0006629 | lipid metabolic process | Yes |
| GO:0016627 | oxidoreductase activity, acting on the CH-CH group of donors | Yes |
| GO:0003674 | molecular_function | No |
| GO:0016491 | oxidoreductase activity | No |
| GO:0044238 | primary metabolic process | No |
| GO:0003824 | catalytic activity | No |
| GO:0008152 | metabolic process | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0008150 | biological_process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 68 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 10 | 32 | 22 |
| 2 | 41 | 63 | 22 |
| 3 | 68 | 90 | 22 |
| 4 | 103 | 125 | 22 |
| 5 | 140 | 162 | 22 |
| 6 | 191 | 213 | 22 |
| 7 | 223 | 245 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauG2|4680 MGVAHVLDDYYLGITAIVTVGYQLFFFAIAYSCKFDKLTDLAGGSNFALVAILTLALSGHHGARQVVASLLLIVW ALRLSGFLFLRILRTGSDDRFDDKRDKFWPFLGFWVFQMFWVWTVSLPVTVLNSPNVTRYPQHAFGTARDVAGIV LFAIGFFFEAVADVQKYTFRQTHDATAVCSRGLFACSRHPNYFGEILIQFSIYMIAVSSAADGYVAGQPYKALYA TIVGPFFLTALLLFVSGLPLSERPKAKARYEKNNNWDAYKRWLDRTSILIPFPPRLYQHMPILVKRTLFLEFPMY VFDPDKHASNAAQHGSRGSDRRSGEEALV* |
| Coding | >OphauG2|4680 ATGGGCGTCGCTCACGTGCTCGACGACTACTATCTCGGCATCACGGCCATTGTGACCGTGGGCTACCAGCTCTTT TTCTTTGCCATTGCGTATAGCTGCAAGTTTGACAAGCTGACGGACCTCGCCGGCGGCTCCAACTTTGCCCTGGTC GCCATTCTCACCCTTGCGCTTTCTGGCCATCATGGCGCCCGCCAAGTCGTCGCCTCTCTCCTGCTCATCGTCTGG GCCCTTCGCCTGTCTGGCTTTCTCTTCTTGCGCATCCTGCGCACCGGATCTGATGACCGCTTCGACGACAAGCGC GACAAGTTTTGGCCCTTTCTCGGTTTCTGGGTCTTTCAGATGTTTTGGGTCTGGACCGTGTCGCTGCCCGTCACC GTCTTGAACTCGCCCAACGTGACACGCTATCCCCAGCATGCCTTTGGCACCGCCCGCGACGTGGCTGGAATAGTC TTGTTTGCCATTGGCTTCTTCTTCGAGGCTGTTGCCGATGTGCAAAAGTATACCTTTCGACAGACGCACGATGCG ACGGCCGTCTGCAGTCGAGGCCTCTTTGCCTGTTCCCGCCATCCAAACTACTTTGGCGAAATCTTGATTCAATTC TCAATCTACATGATTGCCGTCTCCTCGGCCGCAGATGGCTACGTCGCCGGCCAGCCCTACAAGGCCCTCTACGCC ACCATTGTCGGCCCCTTTTTCCTGACGGCCCTCCTCCTCTTCGTCTCGGGCCTGCCCCTTTCCGAGCGTCCCAAG GCCAAGGCGCGCTACGAAAAGAATAACAACTGGGACGCGTATAAGCGCTGGCTCGACCGCACTAGTATTCTGATT CCTTTTCCGCCTCGCCTCTACCAGCACATGCCCATCCTTGTCAAGCGTACTCTCTTTCTCGAGTTCCCCATGTAT GTCTTTGACCCGGACAAGCATGCCAGCAATGCTGCCCAGCACGGCAGCCGAGGCTCAGACCGCCGGAGTGGCGAG GAAGCCTTGGTGTAG |
| Transcript | >OphauG2|4680 ATGGGCGTCGCTCACGTGCTCGACGACTACTATCTCGGCATCACGGCCATTGTGACCGTGGGCTACCAGCTCTTT TTCTTTGCCATTGCGTATAGCTGCAAGTTTGACAAGCTGACGGACCTCGCCGGCGGCTCCAACTTTGCCCTGGTC GCCATTCTCACCCTTGCGCTTTCTGGCCATCATGGCGCCCGCCAAGTCGTCGCCTCTCTCCTGCTCATCGTCTGG GCCCTTCGCCTGTCTGGCTTTCTCTTCTTGCGCATCCTGCGCACCGGATCTGATGACCGCTTCGACGACAAGCGC GACAAGTTTTGGCCCTTTCTCGGTTTCTGGGTCTTTCAGATGTTTTGGGTCTGGACCGTGTCGCTGCCCGTCACC GTCTTGAACTCGCCCAACGTGACACGCTATCCCCAGCATGCCTTTGGCACCGCCCGCGACGTGGCTGGAATAGTC TTGTTTGCCATTGGCTTCTTCTTCGAGGCTGTTGCCGATGTGCAAAAGTATACCTTTCGACAGACGCACGATGCG ACGGCCGTCTGCAGTCGAGGCCTCTTTGCCTGTTCCCGCCATCCAAACTACTTTGGCGAAATCTTGATTCAATTC TCAATCTACATGATTGCCGTCTCCTCGGCCGCAGATGGCTACGTCGCCGGCCAGCCCTACAAGGCCCTCTACGCC ACCATTGTCGGCCCCTTTTTCCTGACGGCCCTCCTCCTCTTCGTCTCGGGCCTGCCCCTTTCCGAGCGTCCCAAG GCCAAGGCGCGCTACGAAAAGAATAACAACTGGGACGCGTATAAGCGCTGGCTCGACCGCACTAGTATTCTGATT CCTTTTCCGCCTCGCCTCTACCAGCACATGCCCATCCTTGTCAAGCGTACTCTCTTTCTCGAGTTCCCCATGTAT GTCTTTGACCCGGACAAGCATGCCAGCAATGCTGCCCAGCACGGCAGCCGAGGCTCAGACCGCCGGAGTGGCGAG GAAGCCTTGGTGTAG |
| Gene | >OphauG2|4680 ATGGGCGTCGCTCACGTGCTCGACGACTACTATCTCGGCATCACGGCCATTGTGACCGTGGGCTACCAGCTCTTT TTCTTTGCCATTGCGTATAGCTGCAAGTTTGACAAGCTGACGGGTGGGTTGTGTATCTCGAGTCTCGCCATTTCG AGTCTCGCCATTTCGAGTCTCCCCATCTCGAGTCTCCCCATCTCGAGTCTCCCCATCAAAAATGCACTCGGCTAA AACACCCCCCATACAGACCTCGCCGGCGGCTCCAACTTTGCCCTGGTCGCCATTCTCACCCTTGCGCTTTCTGGC CATCATGGCGCCCGCCAAGTCGTCGCCTCTCTCCTGCTCATCGTCTGGGCCCTTCGCCTGTCTGGCTTTCTCTTC TTGCGCATCCTGCGCACCGGATCTGATGACCGCTTCGACGACAAGCGCGACAAGTTTTGGCCCTTTCTCGGTTTC TGGGTCTTTCAGATGTTTTGGGTCTGGACCGTGTCGCTGCCCGTCACCGTCTTGAACTCGCCCAACGTGACACGC TATCCCCAGCATGCCTTTGGCACCGCCCGCGACGTGGCTGGAATAGTCTTGTTTGCCATTGGCTTCTTCTTCGAG GCTGTTGCCGATGTGCAAAAGTATACCTTTCGACAGACGCACGATGCGACGGCCGTCTGCAGTCGAGGCCTCTTT GCCTGTTCCCGCCATCCAAACTACTTTGGCGAAATCTTGATTCAATTCTGTATGAGCCCATCATGACTCTGCTGC TGCTGCTACTGCTGCTTTCCATCACTCGCCTCTGGTCCCTGCTAACTAGACAGCAATCTACATGATTGCCGTCTC CTCGGCCGCAGATGGCTACGTCGCCGGCCAGCCCTACAAGGCCCTCTACGCCACCATTGTCGGCCCCTTTTTCCT GACGGCCCTCCTCCTCTTCGTCTCGGGCCTGCCCCTTTCCGAGCGTCCCAAGGCCAAGGCGCGCTACGAAAAGAA TAACAACTGGGACGCGTATAAGCGCTGGCTCGACCGCACTAGTATTCTGATTCCTTTTCCGCCTCGCCTCTACCA GCACATGCCCATCCTTGTCAAGCGTACTCTCTTTCTCGAGTTCCCCATGTATGTCTTTGACCCGGACAAGCATGC CAGCAATGCTGCCCAGCACGGCAGCCGAGGCTCAGACCGCCGGAGTGGCGAGGAAGCCTTGGTGTAG |